UBERON:0003314: Difference between revisions
From FANTOM5_SSTAR
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|namespace= | |namespace= | ||
|def= | |def= | ||
|xref= | |xref=EHDAA2:0000485;;EHDAA:2910;;EMAPA:16324;;EMAPA:16673;;EMAPA:17833;;EMAPA:17836;;VHOG:0001084 | ||
|is_a=UBERON: | |is_a=UBERON:0007213;;UBERON:0009891 | ||
|synonym="mesenchyme of eye" EXACT [OBOL:automatic] | |synonym="mesenchyme of eye" EXACT [OBOL:automatic] | ||
|comment=todo - change mesenchyme relationships to precursor_of | |comment=todo - change mesenchyme relationships to precursor_of | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
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Revision as of 17:03, 26 June 2012
| Name: | eye mesenchyme | ||
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| Synonyms: | "mesenchyme of eye" EXACT [OBOL:automatic] | ||
| Comments: | todo - change mesenchyme relationships to precursor_of |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0007213(mesenchyme derived from head neural crest),UBERON:0009891(facial mesenchyme) |
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Children
| is a: | UBERON:0006230 (extrinsic ocular pre-muscle mass) |
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| develops from: | UBERON:0002203 (vasculature of eye),UBERON:0006230 (extrinsic ocular pre-muscle mass) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003314 (eye mesenchyme), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
