UBERON:0002193: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:01, 26 June 2012
| Name: | hemolymphoid system | ||
|---|---|---|---|
| Definition: | "Anatomical cluster consisting of the hematopoietic system and the lymphoid system, or its analogs." [] | ||
| Xrefs: |
| ||
| Synonyms: |
"haemolymphoid system" RELATED [] "hematolymphoid system" EXACT [] "lymphomyeloid complex" EXACT [] | ||
| Alt_id: | UBERON:FMA_74562-MA_0000013 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system) |
|---|
Children
| part of: | UBERON:0000179 (haemolymphatic fluid),UBERON:0001744 (lymphoid tissue),UBERON:0002390 (hematopoietic system),UBERON:0002465 (lymphoid system),UBERON:0005058 (hemolymphoid system gland) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10025-101D7 (spleen, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10053-101G8 (blood, adult, pool1)
- 10077-102A5 (lymph node, adult, donor1)
- 10095-102C5
- 10097-102C7
- 10192-103E3 (bone marrow, adult)
... further results Mouse (Mus musculus)
- 10025-101D7 (spleen, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
- 10043-101F7 (thymus, fetal, pool1)
- 10044-101F8 (spleen, fetal, pool1)
- 10047-101G2 (tonsil, adult, pool1)
- 10053-101G8 (blood, adult, pool1)
- 10077-102A5 (lymph node, adult, donor1)
- 10095-102C5
- 10097-102C7
- 10192-103E3 (bone marrow, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002193 (hemolymphoid system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.53e-100 | FFCP PHASE1:Hg19::chr19:54784461..54784484,-#_672220f2b4636080d157f59f5795bac0 | p2@LILRB2 |
| 5.53e-100 | FFCP PHASE2:Hg19::chr19:54784461..54784484,-#_672220f2b4636080d157f59f5795bac0 | p2@LILRB2 |
| 8.15e-99 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_0c731bd152fc7c243065e322a35f7e9e | p@chr16:50313426..50313459, + |
| 8.15e-99 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_0c731bd152fc7c243065e322a35f7e9e | p@chr16:50313426..50313459, + |
| 1.23e-98 | FFCP PHASE1:Hg19::chr6:134694635..134694653,-#_33f4a1c7804876e7496a28941c50de10 | p@chr6:134694635..134694653, - |
| 1.23e-98 | FFCP PHASE2:Hg19::chr6:134694635..134694653,-#_33f4a1c7804876e7496a28941c50de10 | p@chr6:134694635..134694653, - |
| 7.52e-98 | FFCP PHASE2:Hg19::chr1:1711415..1711426,-#_9fcbb84f9f89bd6cb493796939b7caab | p4@NADK |
| 7.52e-98 | FFCP PHASE1:Hg19::chr1:1711415..1711426,-#_9fcbb84f9f89bd6cb493796939b7caab | p4@NADK |
| 1.53e-97 | FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_1ec75109c8ff359b46bbc01db20afce8 | p@chr2:119726719..119726744, + |
| 1.53e-97 | FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_1ec75109c8ff359b46bbc01db20afce8 | p@chr2:119726719..119726744, + |
| 1.55e-94 | FFCP PHASE2:Hg19::chr1:150724282..150724308,-#_bcbf6c9af7b7d16a95a87af0a84958a4 | p8@CTSS |
| 1.55e-94 | FFCP PHASE1:Hg19::chr1:150724282..150724308,-#_bcbf6c9af7b7d16a95a87af0a84958a4 | p8@CTSS |
| 8.04e-94 | FFCP PHASE1:Hg19::chr5:156534291..156534357,-#_18eb28f1aef907f68c76bf9525681166 | p4@HAVCR2 |
| 8.04e-94 | FFCP PHASE2:Hg19::chr5:156534291..156534357,-#_18eb28f1aef907f68c76bf9525681166 | p4@HAVCR2 |
| 2.68e-93 | FFCP PHASE1:Hg19::chr7:99971180..99971191,+#_e6f92cf78be62414c0d929350fc6a71c | p3@PILRA |
| 2.68e-93 | FFCP PHASE2:Hg19::chr7:99971180..99971191,+#_e6f92cf78be62414c0d929350fc6a71c | p3@PILRA |
| 5.31e-93 | FFCP PHASE1:Hg19::chr10:20105868..20105875,+#_051ff3989dfd7a1df534c676a00b704a | p8@PLXDC2 |
| 5.31e-93 | FFCP PHASE2:Hg19::chr10:20105868..20105875,+#_051ff3989dfd7a1df534c676a00b704a | p8@PLXDC2 |
| 1.37e-92 | FFCP PHASE1:Hg19::chr19:54726874..54726887,-#_7650da0aa0ca037f9545abc49ec36ef5 | p1@LILRB3 |
| 1.37e-92 | FFCP PHASE2:Hg19::chr19:54726874..54726887,-#_7650da0aa0ca037f9545abc49ec36ef5 | p1@LILRB3 |
| 1.77e-92 | FFCP PHASE2:Hg19::chr19:18283959..18283993,+#_3b09c567f42737d330a458a9c0ce32f1 | p@chr19:18283959..18283993, + |
| 1.77e-92 | FFCP PHASE1:Hg19::chr19:18283959..18283993,+#_3b09c567f42737d330a458a9c0ce32f1 | p@chr19:18283959..18283993, + |
| 1.97e-92 | FFCP PHASE2:Hg19::chr9:115950834..115950848,-#_b19086447ace6d281190a48136924b27 | p6@FKBP15 |
| 1.97e-92 | FFCP PHASE1:Hg19::chr9:115950834..115950848,-#_b19086447ace6d281190a48136924b27 | p6@FKBP15 |
| 3.47e-92 | FFCP PHASE2:Hg19::chr7:139586209..139586213,+#_7391d8f6882e41753728e0039dda30a0 | p@chr7:139586209..139586213, + |
| 3.47e-92 | FFCP PHASE1:Hg19::chr7:139586209..139586213,+#_7391d8f6882e41753728e0039dda30a0 | p@chr7:139586209..139586213, + |
| 4.11e-92 | FFCP PHASE1:Hg19::chr5:176326310..176326321,-#_5f56614bdc42ee283b79da20ff75da48 | p2@HK3 |
| 4.11e-92 | FFCP PHASE2:Hg19::chr5:176326310..176326321,-#_5f56614bdc42ee283b79da20ff75da48 | p2@HK3 |
| 9.43e-92 | FFCP PHASE1:Hg19::chr10:97457378..97457404,+#_aacd9e799f6263757e6fb11c6485c407 | p@chr10:97457378..97457404, + |
| 9.43e-92 | FFCP PHASE2:Hg19::chr10:97457378..97457404,+#_aacd9e799f6263757e6fb11c6485c407 | p@chr10:97457378..97457404, + |
| 1.22e-91 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_6c31ca0eb0ae5d2976e44e3972269fda | p1@CYP1B1-AS1 |
| 1.22e-91 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_6c31ca0eb0ae5d2976e44e3972269fda | p1@CYP1B1-AS1 |
| 3.63e-91 | FFCP PHASE1:Hg19::chr1:150705526..150705571,-#_87e73dd34c728b6c17c8afee49ed7dc1 | p@chr1:150705526..150705571, - |
| 3.63e-91 | FFCP PHASE2:Hg19::chr1:150705526..150705571,-#_87e73dd34c728b6c17c8afee49ed7dc1 | p@chr1:150705526..150705571, - |
| 4.66e-91 | FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_bb972b4acdf4b6bc23b0a4d0f59fc849 | p@chr1:161188686..161188721, + |
| 4.66e-91 | FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_bb972b4acdf4b6bc23b0a4d0f59fc849 | p@chr1:161188686..161188721, + |
| 8.34e-91 | FFCP PHASE2:Hg19::chr1:150737204..150737236,-#_c6729e9a4371d88bd7863733c568f8ce | p3@CTSS |
| 8.34e-91 | FFCP PHASE1:Hg19::chr1:150737204..150737236,-#_c6729e9a4371d88bd7863733c568f8ce | p3@CTSS |
| 1.09e-90 | FFCP PHASE2:Hg19::chr19:54823886..54823925,-#_3d6ac41fa45116721b6057695278945a | p2@LILRA5 |
| 1.09e-90 | FFCP PHASE1:Hg19::chr19:54823886..54823925,-#_3d6ac41fa45116721b6057695278945a | p2@LILRA5 |
| 1.63e-90 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_3f576e411e12f7c16c822381ad1d5d98 | p7@EMILIN2 |
| 1.63e-90 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_3f576e411e12f7c16c822381ad1d5d98 | p7@EMILIN2 |
| 1.25e-89 | FFCP PHASE1:Hg19::chr14:103587759..103587770,+#_70bd786960a1335e6bc5c243681a05b1 | p@chr14:103587759..103587770, + |
| 1.25e-89 | FFCP PHASE2:Hg19::chr14:103587759..103587770,+#_70bd786960a1335e6bc5c243681a05b1 | p@chr14:103587759..103587770, + |
| 1.31e-89 | FFCP PHASE1:Hg19::chr16:8738211..8738249,+#_c90acd4aaa46500eeef4c7ffe0e31736 | p@chr16:8738211..8738249, + |
| 1.31e-89 | FFCP PHASE2:Hg19::chr16:8738211..8738249,+#_c90acd4aaa46500eeef4c7ffe0e31736 | p@chr16:8738211..8738249, + |
| 3.52e-89 | FFCP PHASE1:Hg19::chrX:80458085..80458112,+#_bbc85636eafeadac18b6c12361f162c6 | p7@SH3BGRL |
| 3.52e-89 | FFCP PHASE2:Hg19::chrX:80458085..80458112,+#_bbc85636eafeadac18b6c12361f162c6 | p7@SH3BGRL |
| 9.34e-89 | FFCP PHASE2:Hg19::chr12:8276224..8276237,+#_ab3817517bb41f857f5a8ab92907af80 | p3@CLEC4A |
| 9.34e-89 | FFCP PHASE1:Hg19::chr12:8276224..8276237,+#_ab3817517bb41f857f5a8ab92907af80 | p3@CLEC4A |
| 1.1e-88 | FFCP PHASE2:Hg19::chr14:92927400..92927421,+#_f01e6d482fee968bb437da8f8d5bc050 | p@chr14:92927400..92927421, + |
| 1.1e-88 | FFCP PHASE1:Hg19::chr14:92927400..92927421,+#_f01e6d482fee968bb437da8f8d5bc050 | p@chr14:92927400..92927421, + |
| 1.32e-88 | FFCP PHASE1:Hg19::chr19:47823947..47823977,+#_2e82c791762b76c544e812cf0e3a6438 | p@chr19:47823947..47823977, + |
| 1.32e-88 | FFCP PHASE2:Hg19::chr19:47823947..47823977,+#_2e82c791762b76c544e812cf0e3a6438 | p@chr19:47823947..47823977, + |
| 1.69e-88 | FFCP PHASE2:Hg19::chr14:92927429..92927462,+#_30db8b7ebbee2b5794dd327c6e0e604c | p@chr14:92927429..92927462, + |
| 1.69e-88 | FFCP PHASE1:Hg19::chr14:92927429..92927462,+#_30db8b7ebbee2b5794dd327c6e0e604c | p@chr14:92927429..92927462, + |
| 1.92e-88 | FFCP PHASE1:Hg19::chr17:72542163..72542182,-#_08f98e7656eae0cc00f7330ca231bed5 | p2@CD300C |
| 1.92e-88 | FFCP PHASE2:Hg19::chr17:72542163..72542182,-#_08f98e7656eae0cc00f7330ca231bed5 | p2@CD300C |
| 2.21e-88 | FFCP PHASE1:Hg19::chr11:47380465..47380487,-#_c6d7713ed3be24dbc37734fec3a13b0b | p@chr11:47380465..47380487, - |
| 2.21e-88 | FFCP PHASE2:Hg19::chr11:47380465..47380487,-#_c6d7713ed3be24dbc37734fec3a13b0b | p@chr11:47380465..47380487, - |
| 2.78e-88 | FFCP PHASE2:Hg19::chr7:139529081..139529084,+#_a8812099bcc1c73f709a8988ac520f2d | p6@TBXAS1 |
| 2.78e-88 | FFCP PHASE1:Hg19::chr7:139529081..139529084,+#_a8812099bcc1c73f709a8988ac520f2d | p6@TBXAS1 |
| 4.09e-88 | FFCP PHASE2:Hg19::chr6:31555045..31555057,+#_0000cde189a768b00e5cf503d9e149bd | p9@LST1 |
| 4.09e-88 | FFCP PHASE1:Hg19::chr6:31555045..31555057,+#_0000cde189a768b00e5cf503d9e149bd | p9@LST1 |
| 4.29e-88 | FFCP PHASE1:Hg19::chr19:36395505..36395529,-#_5007ff738da8c9a5633a83a9da319796 | p@chr19:36395505..36395529, - |
| 4.29e-88 | FFCP PHASE2:Hg19::chr19:36395505..36395529,-#_5007ff738da8c9a5633a83a9da319796 | p@chr19:36395505..36395529, - |
| 4.95e-88 | FFCP PHASE1:Hg19::chr9:137808181..137808200,+#_346f623ef1ddf275061795b7f98ae1f5 | p@chr9:137808181..137808200, + |
| 4.95e-88 | FFCP PHASE2:Hg19::chr9:137808181..137808200,+#_346f623ef1ddf275061795b7f98ae1f5 | p@chr9:137808181..137808200, + |
| 9.64e-88 | FFCP PHASE1:Hg19::chr1:161039459..161039478,-#_82dbc31bcb868b5e47c192bcdb359697 | p4@ARHGAP30 |
| 9.64e-88 | FFCP PHASE2:Hg19::chr1:161039459..161039478,-#_82dbc31bcb868b5e47c192bcdb359697 | p4@ARHGAP30 |
| 1.02e-87 | FFCP PHASE1:Hg19::chr14:95651949..95651981,+#_75d8a1ae054a39d7387e42d446105d21 | p@chr14:95651949..95651981, + |
| 1.02e-87 | FFCP PHASE1:Hg19::chr14:92927376..92927396,+#_75d8a1ae054a39d7387e42d446105d21 | p@chr14:92927376..92927396, + |
| 1.02e-87 | FFCP PHASE2:Hg19::chr14:92927376..92927396,+#_75d8a1ae054a39d7387e42d446105d21 | p@chr14:92927376..92927396, + |
| 1.02e-87 | FFCP PHASE2:Hg19::chr14:95651949..95651981,+#_75d8a1ae054a39d7387e42d446105d21 | p@chr14:95651949..95651981, + |
| 1.4e-87 | FFCP PHASE2:Hg19::chr19:18287936..18287989,+#_acd3f6fb1e93084009a46b697d72ea09 | p@chr19:18287936..18287989, + |
| 1.4e-87 | FFCP PHASE1:Hg19::chr19:18287936..18287989,+#_acd3f6fb1e93084009a46b697d72ea09 | p@chr19:18287936..18287989, + |
| 1.99e-87 | FFCP PHASE1:Hg19::chr1:161187774..161187799,+#_9bc71c1ad8d185fda43a0184c5347bfe | p@chr1:161187774..161187799, + |
| 1.99e-87 | FFCP PHASE2:Hg19::chr1:161187774..161187799,+#_9bc71c1ad8d185fda43a0184c5347bfe | p@chr1:161187774..161187799, + |
| 2.28e-87 | FFCP PHASE2:Hg19::chr1:150737159..150737199,-#_22fcca8ef56c97d0e42b07d2553904a3 | p4@CTSS |
| 2.28e-87 | FFCP PHASE1:Hg19::chr1:150737159..150737199,-#_22fcca8ef56c97d0e42b07d2553904a3 | p4@CTSS |
| 4.57e-87 | FFCP PHASE1:Hg19::chrX:152086449..152086473,+#_18a5c3a812a66bf6e23fb6d692530c2a | p4@ZNF185 |
| 4.57e-87 | FFCP PHASE2:Hg19::chrX:152086449..152086473,+#_18a5c3a812a66bf6e23fb6d692530c2a | p4@ZNF185 |
| 5.55e-87 | FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_6358e93defb990c192193b339b413e0f | p@chr1:161187824..161187847, + |
| 5.55e-87 | FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_6358e93defb990c192193b339b413e0f | p@chr1:161187824..161187847, + |
| 5.96e-87 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_6e7f4c7050491328efa021db410f28ea | p@chr1:161188661..161188679, + |
| 5.96e-87 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_6e7f4c7050491328efa021db410f28ea | p@chr1:161188661..161188679, + |
| 1.65e-86 | FFCP PHASE1:Hg19::chr12:54778351..54778378,-#_e08365525d70d5f044d69a1879aad561 | p6@ZNF385A |
| 1.65e-86 | FFCP PHASE2:Hg19::chr12:54778351..54778378,-#_e08365525d70d5f044d69a1879aad561 | p6@ZNF385A |
| 2.12e-86 | FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_3275835aca99e920e98b4dd10a292b1d | p@chr2:145429606..145429658, + |
| 2.12e-86 | FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_3275835aca99e920e98b4dd10a292b1d | p@chr2:145429606..145429658, + |
| 3.17e-86 | FFCP PHASE1:Hg19::chr5:79442172..79442212,-#_f91d1e3d42a7a2586edd1e815cd60e4b | p@chr5:79442172..79442212, - |
| 3.17e-86 | FFCP PHASE2:Hg19::chr5:79442172..79442212,-#_f91d1e3d42a7a2586edd1e815cd60e4b | p@chr5:79442172..79442212, - |
| 6.43e-86 | FFCP PHASE2:Hg19::chr11:58977674..58977688,-#_877c738d46558b49b7ba76b42829ee78 | p1@AK024358 |
| 6.43e-86 | FFCP PHASE1:Hg19::chr11:58977674..58977688,-#_877c738d46558b49b7ba76b42829ee78 | p1@AK024358 |
| 7.22e-86 | FFCP PHASE2:Hg19::chr14:103587774..103587784,+#_7b2ee4b3edf1ef4eef8256c2fc5092a8 | p@chr14:103587774..103587784, + |
| 7.22e-86 | FFCP PHASE1:Hg19::chr14:103587774..103587784,+#_7b2ee4b3edf1ef4eef8256c2fc5092a8 | p@chr14:103587774..103587784, + |
| 9.37e-86 | FFCP PHASE1:Hg19::chr7:99987647..99987671,+#_51851b6a3cef596f2382b539dc918f93 | p@chr7:99987647..99987671, + |
| 9.37e-86 | FFCP PHASE2:Hg19::chr7:99987647..99987671,+#_51851b6a3cef596f2382b539dc918f93 | p@chr7:99987647..99987671, + |
| 1.31e-85 | FFCP PHASE1:Hg19::chr11:122735321..122735348,+#_a28f1a1eecc32904b7f7b55109b9354c | p1@CRTAM |
| 1.31e-85 | FFCP PHASE2:Hg19::chr11:122735321..122735348,+#_a28f1a1eecc32904b7f7b55109b9354c | p1@CRTAM |
