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Revision as of 17:40, 15 June 2012

Name:ear hair cell
Namespace:cell
Definition:"A hair cell of the ear that contains the organs of balance and hearing." [GOC:dph, GOC:tfm, ISBN:0192801023]
Synonyms: "ear receptor cell" EXACT []
Created by:tmeehan
Creation date:2010-09-24T01:49:31Z


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000855(sensory hair cell)



Children


is a:CL:0000202 (auditory hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002374 (ear hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_6393a251f7ef04078762632518f885bdp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_6393a251f7ef04078762632518f885bdp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_6393a251f7ef04078762632518f885bdp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_6393a251f7ef04078762632518f885bdp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_6393a251f7ef04078762632518f885bdp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_6393a251f7ef04078762632518f885bdp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_6393a251f7ef04078762632518f885bdp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_6393a251f7ef04078762632518f885bdp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_6393a251f7ef04078762632518f885bdp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_6393a251f7ef04078762632518f885bdp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_6393a251f7ef04078762632518f885bdp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_6393a251f7ef04078762632518f885bdp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_6393a251f7ef04078762632518f885bdp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_6393a251f7ef04078762632518f885bdp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_6393a251f7ef04078762632518f885bdp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_6393a251f7ef04078762632518f885bdp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_6393a251f7ef04078762632518f885bdp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_6393a251f7ef04078762632518f885bdp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_6393a251f7ef04078762632518f885bdp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_6393a251f7ef04078762632518f885bdp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_6393a251f7ef04078762632518f885bdp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_6393a251f7ef04078762632518f885bdp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_6393a251f7ef04078762632518f885bdp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_6393a251f7ef04078762632518f885bdp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_6393a251f7ef04078762632518f885bdp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_6393a251f7ef04078762632518f885bdp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_6393a251f7ef04078762632518f885bdp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_6393a251f7ef04078762632518f885bdp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_6393a251f7ef04078762632518f885bdp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_6393a251f7ef04078762632518f885bdp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_6393a251f7ef04078762632518f885bdp@chr6:36966993..36966996, -
2.74e-44FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_ca819317444dcb86559790a95de50e7bp12@B3galt5
2.74e-44FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_ca819317444dcb86559790a95de50e7bp3@Kncn
2.74e-44FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_ca819317444dcb86559790a95de50e7bp@chr15:89215319..89215330, +
2.74e-44FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_ca819317444dcb86559790a95de50e7bp@chr12:109905399..109905416, +
2.74e-44FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_ca819317444dcb86559790a95de50e7bp4@Chrna10
2.74e-44FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_ca819317444dcb86559790a95de50e7bp@chr12:13508046..13508055, +
2.74e-44FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_ca819317444dcb86559790a95de50e7bp@chr11:94371127..94371139, -
2.74e-44FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_ca819317444dcb86559790a95de50e7bp2@Tmprss3
2.74e-44FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_ca819317444dcb86559790a95de50e7bp@chr13:37195838..37195870, -
2.74e-44FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_ca819317444dcb86559790a95de50e7bp@chr2:53464178..53464186, +
2.74e-44FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_ca819317444dcb86559790a95de50e7bp@chr13:78257454..78257465, +
2.74e-44FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_ca819317444dcb86559790a95de50e7bp3@Kncn
2.74e-44FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_ca819317444dcb86559790a95de50e7bp@chr1:78523144..78523177, +
2.74e-44FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_ca819317444dcb86559790a95de50e7bp@chr11:114603036..114603048, +
2.74e-44FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_ca819317444dcb86559790a95de50e7bp@chr7:141605556..141605563, -
2.74e-44FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983102..13983126, +
2.74e-44FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_ca819317444dcb86559790a95de50e7bp@chr1:182528371..182528385, +
2.74e-44FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_ca819317444dcb86559790a95de50e7bp4@Gipc3
2.74e-44FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_ca819317444dcb86559790a95de50e7bp@chr3:154459231..154459240, +
2.74e-44FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_ca819317444dcb86559790a95de50e7bp@chr18:42158627..42158630, -
2.74e-44FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_ca819317444dcb86559790a95de50e7bp1@Tmprss3
2.74e-44FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_ca819317444dcb86559790a95de50e7bp@chr16:93971325..93971337, -
2.74e-44FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_ca819317444dcb86559790a95de50e7bp@chr19:10536797..10536802, -
2.74e-44FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_ca819317444dcb86559790a95de50e7bp@chr17:13983102..13983126, +
2.74e-44FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_ca819317444dcb86559790a95de50e7bp7@A730017C20Rik
2.74e-44FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_ca819317444dcb86559790a95de50e7bp@chr6:113251606..113251613, +
2.74e-44FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_ca819317444dcb86559790a95de50e7bp@chr7:141605556..141605563, -
2.74e-44FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_ca819317444dcb86559790a95de50e7bp3@Fanca
2.74e-44FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_ca819317444dcb86559790a95de50e7bp@chr5:3909310..3909321, +
2.74e-44FFCP PHASE1:Mm9::chr17:66272852..66272855,-#_ca819317444dcb86559790a95de50e7bp@chr17:66272852..66272855, -
2.74e-44FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_ca819317444dcb86559790a95de50e7bp10@Sec11a
2.74e-44FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_ca819317444dcb86559790a95de50e7bp41@Cacnb2
2.74e-44FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_ca819317444dcb86559790a95de50e7bp1@Tmprss7
2.74e-44FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_ca819317444dcb86559790a95de50e7bp@chr15:65641741..65641748, +
2.74e-44FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_ca819317444dcb86559790a95de50e7bp2@Plscr5
2.74e-44FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_ca819317444dcb86559790a95de50e7bp@chr12:13508046..13508055, +
2.74e-44FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_ca819317444dcb86559790a95de50e7bp@chr9:56208792..56208814, -
2.74e-44FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_ca819317444dcb86559790a95de50e7bp7@Pkn3

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