CL:0002334: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002334
|name=preadipocyte
|namespace=cell
|def="An undifferentiated fibroblast that can be stimulated to form a fat cell." [GOC:tfm, PMID:18793119]
|xref=BTO...") |
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|id=CL:0002334 | |id=CL:0002334 | ||
|name=preadipocyte | |name=preadipocyte | ||
|namespace= | |namespace=efo | ||
|def="An | |def="An undifferentiatedﾂ�fibroblastﾂ�that can be stimulated to form a fat cell." [GOC:tfm, PMID:18793119] | ||
|xref=BTO:0001107 | |xref=BTO:0001107 | ||
|is_a=CL:0000057 | |is_a=CL:0000057;;EFO:0000324 | ||
|synonym= | |synonym= | ||
|comment= | |comment= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:40, 15 June 2012
| Name: | preadipocyte | ||
|---|---|---|---|
| Namespace: | efo | ||
| Definition: | "An undifferentiatedﾂ�fibroblastﾂ�that can be stimulated to form a fat cell." [GOC:tfm, PMID:18793119] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2010-09-20T02:31:53Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast),EFO:0000324(cell type) |
|---|
Children
| is a: | CL:0002578 (mesenteric preadipocyte),CL:0002579 (omentum preadipocyte),CL:0002580 (preadipocyte of the breast),CL:0002581 (perirenal preadipocyte),CL:0002582 (visceral preadipocyte),CL:0002583 (subcutaneous preadipocyte) |
|---|---|
| derives from: | FF:0000137 (human preadipocyte sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11279-116I1 (Preadipocyte - subcutaneous, donor1)
- 11280-116I2 (Preadipocyte - visceral, donor1)
- 11328-117E5 (Preadipocyte - breast, donor2)
- 11329-117E6 (Preadipocyte - omental, donor2)
- 11330-117E7
- 11356-117H6 (Preadipocyte - subcutaneous, donor2)
- 11357-117H7 (Preadipocyte - visceral, donor2)
- 11403-118D8 (Preadipocyte - omental, donor3)
- 11428-118G6 (Preadipocyte - subcutaneous, donor3)
- 11429-118G7 (Preadipocyte - visceral, donor3)
... further results Mouse (Mus musculus)
- 11279-116I1 (Preadipocyte - subcutaneous, donor1)
- 11280-116I2 (Preadipocyte - visceral, donor1)
- 11328-117E5 (Preadipocyte - breast, donor2)
- 11329-117E6 (Preadipocyte - omental, donor2)
- 11330-117E7
- 11356-117H6 (Preadipocyte - subcutaneous, donor2)
- 11357-117H7 (Preadipocyte - visceral, donor2)
- 11403-118D8 (Preadipocyte - omental, donor3)
- 11428-118G6 (Preadipocyte - subcutaneous, donor3)
- 11429-118G7 (Preadipocyte - visceral, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002334 (preadipocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.69e-73 | FFCP PHASE2:Hg19::chr4:112437251..112437278,+#_18fe73f75db059bcb94e906742398ea0 | p@chr4:112437251..112437278, + |
| 2.69e-73 | FFCP PHASE1:Hg19::chr4:112437251..112437278,+#_18fe73f75db059bcb94e906742398ea0 | p@chr4:112437251..112437278, + |
| 5.94e-66 | FFCP PHASE2:Hg19::chr4:112437339..112437350,+#_e6965deb2db08f1ed168f1ae5a74b21f | p@chr4:112437339..112437350, + |
| 5.94e-66 | FFCP PHASE1:Hg19::chr4:112437339..112437350,+#_e6965deb2db08f1ed168f1ae5a74b21f | p@chr4:112437339..112437350, + |
| 7.49e-62 | FFCP PHASE1:Hg19::chr6:35216360..35216374,+#_1ea16a47585d50797488a1d64efaf120 | p10@SCUBE3 |
| 7.49e-62 | FFCP PHASE2:Hg19::chr6:35216360..35216374,+#_1ea16a47585d50797488a1d64efaf120 | p10@SCUBE3 |
| 2.04e-57 | FFCP PHASE1:Hg19::chr2:191745264..191745275,+#_572e7623edc89cb466bb8061fe421c36 | p21@GLS |
| 2.04e-57 | FFCP PHASE2:Hg19::chr2:191745264..191745275,+#_572e7623edc89cb466bb8061fe421c36 | p21@GLS |
| 1.21e-50 | FFCP PHASE1:Hg19::chr15:81214436..81214445,+#_64c663cfcebc79a2ae60a74812481bcd | p13@KIAA1199 |
| 1.21e-50 | FFCP PHASE2:Hg19::chr15:81214436..81214445,+#_64c663cfcebc79a2ae60a74812481bcd | p13@KIAA1199 |
| 2.03e-50 | FFCP PHASE1:Hg19::chr10:105428632..105428639,-#_76a24a4a2934722b69abc9e9b60a2ab1 | p26@SH3PXD2A |
| 2.03e-50 | FFCP PHASE2:Hg19::chr10:105428632..105428639,-#_76a24a4a2934722b69abc9e9b60a2ab1 | p26@SH3PXD2A |
| 2.93e-50 | FFCP PHASE1:Hg19::chr6:35218350..35218364,+#_81d8d958f055c39a97ebff739f7dbad0 | p2@AK123742 |
| 2.93e-50 | FFCP PHASE2:Hg19::chr6:35218350..35218364,+#_81d8d958f055c39a97ebff739f7dbad0 | p2@AK123742 |
| 1.69e-49 | FFCP PHASE2:Hg19::chr15:81242191..81242201,+#_a6b914cb33fd49e78bf34314390cea20 | p19@KIAA1199 |
| 1.69e-49 | FFCP PHASE1:Hg19::chr15:81242191..81242201,+#_a6b914cb33fd49e78bf34314390cea20 | p19@KIAA1199 |
| 1.87e-48 | FFCP PHASE1:Hg19::chr6:35217101..35217114,+#_5651902789ca50bfbbf1e5aa54616def | p@chr6:35217101..35217114, + |
| 1.87e-48 | FFCP PHASE2:Hg19::chr6:35217101..35217114,+#_5651902789ca50bfbbf1e5aa54616def | p@chr6:35217101..35217114, + |
| 6.44e-45 | FFCP PHASE1:Hg19::chr7:40251315..40251325,-#_cf728cd88ee770e39676afa7b1919efe | p@chr7:40251315..40251325, - |
| 6.44e-45 | FFCP PHASE2:Hg19::chr7:40251315..40251325,-#_cf728cd88ee770e39676afa7b1919efe | p@chr7:40251315..40251325, - |
| 4.43e-44 | FFCP PHASE2:Hg19::chr20:61368258..61368275,+#_a80451159ee9d3827f801d28373d7809 | p@chr20:61368258..61368275, + |
| 4.43e-44 | FFCP PHASE1:Hg19::chr20:61368258..61368275,+#_a80451159ee9d3827f801d28373d7809 | p@chr20:61368258..61368275, + |
| 1.15e-42 | FFCP PHASE2:Hg19::chr15:81173239..81173250,+#_05d843e4d0fb18852016bfcf4ee6d54a | p@chr15:81173239..81173250, + |
| 1.15e-42 | FFCP PHASE1:Hg19::chr15:81173239..81173250,+#_05d843e4d0fb18852016bfcf4ee6d54a | p@chr15:81173239..81173250, + |
| 3.74e-42 | FFCP PHASE2:Hg19::chr6:35214004..35214032,+#_7c8d89a3bcf6abb30f4baeeb4067654e | p@chr6:35214004..35214032, + |
| 3.74e-42 | FFCP PHASE1:Hg19::chr6:35214004..35214032,+#_7c8d89a3bcf6abb30f4baeeb4067654e | p@chr6:35214004..35214032, + |
| 2.56e-41 | FFCP PHASE2:Hg19::chr6:169622388..169622400,-#_c3302daff1cee2f6abedab2df846f934 | p@chr6:169622388..169622400, - |
| 2.56e-41 | FFCP PHASE1:Hg19::chr6:169622388..169622400,-#_c3302daff1cee2f6abedab2df846f934 | p@chr6:169622388..169622400, - |
| 3.5e-40 | FFCP PHASE2:Hg19::chr12:8814772..8814786,-#_5e32f626e337c4ad070ba8aa43773f70 | p13@MFAP5 |
| 3.5e-40 | FFCP PHASE1:Hg19::chr12:8814772..8814786,-#_5e32f626e337c4ad070ba8aa43773f70 | p13@MFAP5 |
| 7.02e-40 | FFCP PHASE1:Hg19::chr6:35218158..35218175,+#_9f88b79e44ed8011959644a94fd7c0c3 | p@chr6:35218158..35218175, + |
| 7.02e-40 | FFCP PHASE2:Hg19::chr6:35218158..35218175,+#_9f88b79e44ed8011959644a94fd7c0c3 | p@chr6:35218158..35218175, + |
| 7.93e-40 | FFCP PHASE2:Hg19::chr19:18900031..18900054,+#_3482739636506258048d8a14d7c7e15c | p@chr19:18900031..18900054, + |
| 7.93e-40 | FFCP PHASE1:Hg19::chr19:18900031..18900054,+#_3482739636506258048d8a14d7c7e15c | p@chr19:18900031..18900054, + |
| 1.79e-39 | FFCP PHASE2:Hg19::chr19:18896512..18896527,-#_c4dac0ad78c3d7194ce7bcbe8ae8f71e | p@chr19:18896512..18896527, - |
| 1.79e-39 | FFCP PHASE1:Hg19::chr19:18896512..18896527,-#_c4dac0ad78c3d7194ce7bcbe8ae8f71e | p@chr19:18896512..18896527, - |
| 3.78e-39 | FFCP PHASE1:Hg19::chr19:18900893..18900901,-#_269035056cb0b3616a794ca6e8a2cd60 | p@chr19:18900893..18900901, - |
| 3.78e-39 | FFCP PHASE2:Hg19::chr19:18900893..18900901,-#_269035056cb0b3616a794ca6e8a2cd60 | p@chr19:18900893..18900901, - |
| 6.8e-39 | FFCP PHASE2:Hg19::chr14:74965436..74965448,-#_ca7430d4ea9eaf1c43446bab174df4bb | p27@LTBP2 |
| 6.8e-39 | FFCP PHASE1:Hg19::chr14:74965436..74965448,-#_ca7430d4ea9eaf1c43446bab174df4bb | p27@LTBP2 |
| 1.04e-38 | FFCP PHASE2:Hg19::chr15:81243109..81243120,+#_db59ddea42a2ecc4d72e56882286f853 | p@chr15:81243109..81243120, + |
| 1.04e-38 | FFCP PHASE1:Hg19::chr15:81243109..81243120,+#_db59ddea42a2ecc4d72e56882286f853 | p@chr15:81243109..81243120, + |
| 1.62e-38 | FFCP PHASE1:Hg19::chrX:2670141..2670151,+#_5c60337d90a05c9d5eaecc90cf20e3ea | p5@XG |
| 1.62e-38 | FFCP PHASE2:Hg19::chrX:2670141..2670151,+#_5c60337d90a05c9d5eaecc90cf20e3ea | p5@XG |
| 4.7e-38 | FFCP PHASE1:Hg19::chrX:2670039..2670048,+#_01398399fbd727061d675e85bfff9a77 | p4@XG |
| 4.7e-38 | FFCP PHASE2:Hg19::chrX:2670039..2670048,+#_01398399fbd727061d675e85bfff9a77 | p4@XG |
| 4.91e-38 | FFCP PHASE2:Hg19::chr9:132460997..132461006,+#_2586e38634ff51129f16bc29347bca53 | p@chr9:132460997..132461006, + |
| 4.91e-38 | FFCP PHASE1:Hg19::chr9:132460997..132461006,+#_2586e38634ff51129f16bc29347bca53 | p@chr9:132460997..132461006, + |
| 4.95e-38 | FFCP PHASE1:Hg19::chr5:111312488..111312498,-#_cdc73666a0d54fe2fe47eb93b4a547d7 | p35@C5orf13 |
| 4.95e-38 | FFCP PHASE2:Hg19::chr5:111312488..111312498,-#_cdc73666a0d54fe2fe47eb93b4a547d7 | p35@C5orf13 |
| 9.65e-38 | FFCP PHASE2:Hg19::chr3:120500144..120500155,+#_2ccdf6faea41d39d121d52c4556e770f | p@chr3:120500144..120500155, + |
| 9.65e-38 | FFCP PHASE1:Hg19::chr3:120500144..120500155,+#_2ccdf6faea41d39d121d52c4556e770f | p@chr3:120500144..120500155, + |
| 1.02e-37 | FFCP PHASE2:Hg19::chr19:18896642..18896656,-#_e7e7cadbbe6d5c66cd40927d6f8409bc | p@chr19:18896642..18896656, - |
| 1.02e-37 | FFCP PHASE1:Hg19::chr19:18896642..18896656,-#_e7e7cadbbe6d5c66cd40927d6f8409bc | p@chr19:18896642..18896656, - |
| 1.14e-37 | FFCP PHASE1:Hg19::chr15:81225699..81225710,+#_351ecdbc95239c19f5aed71e67354300 | p26@KIAA1199 |
| 1.14e-37 | FFCP PHASE2:Hg19::chr15:81225699..81225710,+#_351ecdbc95239c19f5aed71e67354300 | p26@KIAA1199 |
| 1.66e-37 | FFCP PHASE1:Hg19::chr8:74464406..74464424,-#_ac6ebcb183b6236a619119f577496d2f | p4@STAU2 |
| 1.66e-37 | FFCP PHASE2:Hg19::chr8:74464406..74464424,-#_ac6ebcb183b6236a619119f577496d2f | p4@STAU2 |
| 5.98e-37 | FFCP PHASE1:Hg19::chr19:18899713..18899727,-#_a60175334fbe3b1010e6969ac66824e2 | p@chr19:18899713..18899727, - |
| 5.98e-37 | FFCP PHASE2:Hg19::chr19:18899713..18899727,-#_a60175334fbe3b1010e6969ac66824e2 | p@chr19:18899713..18899727, - |
| 6.58e-37 | FFCP PHASE1:Hg19::chr1:860201..860213,-#_41b5359432a77e399b9097f2c325d043 | p@chr1:860201..860213, - |
| 6.58e-37 | FFCP PHASE2:Hg19::chr1:860201..860213,-#_41b5359432a77e399b9097f2c325d043 | p@chr1:860201..860213, - |
| 1.72e-36 | FFCP PHASE1:Hg19::chr4:41540152..41540157,+#_d1b060cdf4923613abc9e9231d88a4da | p20@LIMCH1 |
| 1.72e-36 | FFCP PHASE2:Hg19::chr4:41540152..41540157,+#_d1b060cdf4923613abc9e9231d88a4da | p20@LIMCH1 |
| 3.61e-36 | FFCP PHASE2:Hg19::chr19:18900836..18900848,-#_6f691250750714aec0237144da5840a5 | p@chr19:18900836..18900848, - |
| 3.61e-36 | FFCP PHASE1:Hg19::chr19:18900836..18900848,-#_6f691250750714aec0237144da5840a5 | p@chr19:18900836..18900848, - |
| 1.26e-35 | FFCP PHASE1:Hg19::chr19:46894342..46894354,+#_2faa72e7f041e0ac123da2552e0e45b8 | p@chr19:46894342..46894354, + |
| 1.26e-35 | FFCP PHASE2:Hg19::chr19:46894342..46894354,+#_2faa72e7f041e0ac123da2552e0e45b8 | p@chr19:46894342..46894354, + |
| 2.73e-35 | FFCP PHASE1:Hg19::chr10:105428550..105428555,-#_7400dbbd4d4521105366aa1c41c2afb4 | p25@SH3PXD2A |
| 2.73e-35 | FFCP PHASE2:Hg19::chr10:105428550..105428555,-#_7400dbbd4d4521105366aa1c41c2afb4 | p25@SH3PXD2A |
| 5.88e-35 | FFCP PHASE2:Hg19::chr12:8814756..8814767,-#_8979a2bdf609afbed484ddda11ea234a | p19@MFAP5 |
| 5.88e-35 | FFCP PHASE1:Hg19::chr12:8814756..8814767,-#_8979a2bdf609afbed484ddda11ea234a | p19@MFAP5 |
| 1.06e-34 | FFCP PHASE2:Hg19::chr15:68631946..68631967,-#_36bbe6444df5213249a790218c293ab9 | p@chr15:68631946..68631967, - |
| 1.06e-34 | FFCP PHASE1:Hg19::chr15:68631946..68631967,-#_36bbe6444df5213249a790218c293ab9 | p@chr15:68631946..68631967, - |
| 1.21e-34 | FFCP PHASE1:Hg19::chr19:18893717..18893745,+#_2c6e3178a390cb67d47b50f99a607878 | p@chr19:18893717..18893745, + |
| 1.21e-34 | FFCP PHASE2:Hg19::chr19:18893717..18893745,+#_2c6e3178a390cb67d47b50f99a607878 | p@chr19:18893717..18893745, + |
| 1.51e-34 | FFCP PHASE2:Hg19::chr13:102104738..102104747,+#_76f6dd3d075bdfb770874a451d9d88b2 | p11@ITGBL1 |
| 1.51e-34 | FFCP PHASE1:Hg19::chr13:102104738..102104747,+#_76f6dd3d075bdfb770874a451d9d88b2 | p11@ITGBL1 |
| 1.54e-34 | FFCP PHASE2:Hg19::chr18:74817666..74817686,-#_fed3b76f234b1b6feac8fe34269dcf9c | p2@AB463902, p2@CU688026 |
| 1.54e-34 | FFCP PHASE1:Hg19::chr18:74817666..74817686,-#_fed3b76f234b1b6feac8fe34269dcf9c | p2@AB463902, p2@CU688026 |
| 1.56e-34 | FFCP PHASE2:Hg19::chr19:18897375..18897390,-#_d425ef904c49bf5b6af4cdfcbc93009f | p4@COMP |
| 1.56e-34 | FFCP PHASE1:Hg19::chr19:18897375..18897390,-#_d425ef904c49bf5b6af4cdfcbc93009f | p4@COMP |
| 2.03e-34 | FFCP PHASE2:Hg19::chr15:26342114..26342124,+#_249cc215af326bd3853f8684a8ad6ed9 | p@chr15:26342114..26342124, + |
| 2.03e-34 | FFCP PHASE1:Hg19::chr15:26342114..26342124,+#_249cc215af326bd3853f8684a8ad6ed9 | p@chr15:26342114..26342124, + |
| 2.33e-34 | FFCP PHASE1:Hg19::chr19:18896862..18896874,-#_c9ed4f1813548796c6478f16af0b3302 | p@chr19:18896862..18896874, - |
| 2.33e-34 | FFCP PHASE2:Hg19::chr19:18896862..18896874,-#_c9ed4f1813548796c6478f16af0b3302 | p@chr19:18896862..18896874, - |
| 3.13e-34 | FFCP PHASE1:Hg19::chr7:155005898..155005912,+#_013aea887152e65ddf666ad03d021445 | p@chr7:155005898..155005912, + |
| 3.13e-34 | FFCP PHASE2:Hg19::chr7:155005898..155005912,+#_013aea887152e65ddf666ad03d021445 | p@chr7:155005898..155005912, + |
| 5.98e-34 | FFCP PHASE2:Hg19::chr5:150159331..150159340,-#_47421bf98f17619e1fa9f49136d894f7 | p@chr5:150159331..150159340, - |
| 5.98e-34 | FFCP PHASE1:Hg19::chr5:150159331..150159340,-#_47421bf98f17619e1fa9f49136d894f7 | p@chr5:150159331..150159340, - |
| 1.45e-33 | FFCP PHASE1:Hg19::chr7:134430175..134430178,+#_f98fe9afc975976bbf26495e9e4174ad | p85@CALD1 |
| 1.45e-33 | FFCP PHASE2:Hg19::chr7:134430175..134430178,+#_f98fe9afc975976bbf26495e9e4174ad | p85@CALD1 |
| 2.03e-33 | FFCP PHASE1:Hg19::chr6:35219318..35219336,+#_4791dd0dab2524895f84c949154602de | p3@AK123742 |
| 2.03e-33 | FFCP PHASE2:Hg19::chr6:35219318..35219336,+#_4791dd0dab2524895f84c949154602de | p3@AK123742 |
| 2.83e-33 | FFCP PHASE1:Hg19::chr15:39087815..39087824,-#_4bbdd4585aeaf436ec487ec8786d1203 | p@chr15:39087815..39087824, - |
| 2.83e-33 | FFCP PHASE2:Hg19::chr15:39087815..39087824,-#_4bbdd4585aeaf436ec487ec8786d1203 | p@chr15:39087815..39087824, - |
| 2.89e-33 | FFCP PHASE1:Hg19::chr1:200452510..200452521,-#_d51b0ac960d84d424c2bab36a52c56a7 | p@chr1:200452510..200452521, - |
| 2.89e-33 | FFCP PHASE2:Hg19::chr1:200452510..200452521,-#_d51b0ac960d84d424c2bab36a52c56a7 | p@chr1:200452510..200452521, - |
| 3.34e-33 | FFCP PHASE1:Hg19::chr19:18899276..18899289,-#_5ce32bde1906a322e0577006ca72a4f5 | p@chr19:18899276..18899289, - |
| 3.34e-33 | FFCP PHASE2:Hg19::chr19:18899276..18899289,-#_5ce32bde1906a322e0577006ca72a4f5 | p@chr19:18899276..18899289, - |
