CL:0002078: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0002078
|name=meso-epithelial cell
|namespace=cell
|def="Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenF...") |
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|name=meso-epithelial cell | |name=meso-epithelial cell | ||
|namespace=cell | |namespace=cell | ||
|def="Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial | |def="Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial%20cell.html] | ||
|xref=FMA:69076 | |xref=FMA:69076 | ||
|is_a=CL:0000066;;CL:0002371 | |is_a=CL:0000066;;CL:0002371 | ||
|synonym=" | |synonym="epithelial mesenchymal cell" EXACT [] | ||
|comment= | |comment= | ||
|alt_id= | |alt_id= | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:39, 15 June 2012
| Name: | meso-epithelial cell | ||
|---|---|---|---|
| Namespace: | cell | ||
| Definition: | "Epithelial cell derived from mesoderm or mesenchyme." [FMA:69076, GOC:tfm, http://63.198.234.228/OpenFMA/Meso-epithelial%20cell.html] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial mesenchymal cell" EXACT [] | ||
| Created by: | tmeehan | ||
| Creation date: | 2010-06-29T03:49:14Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000066(epithelial cell),CL:0002371(somatic cell) |
|---|---|
| develops_from: | CL:0000222(mesodermal cell) |
Children
| is a: | CL:0000115 (endothelial cell),CL:0000214 (synovial cell),CL:0002097 (cortical cell of adrenal gland),CL:0002174 (follicular cell of ovary),CL:0002306 (epithelial cell of proximal tubule) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10624-108H3 (granulosa cell tumor cell line:KGN)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
... further results Mouse (Mus musculus)
- 10441-106E9 (synovial sarcoma cell line:HS-SY-II)
- 10493-107B7 (mesothelioma cell line:ACC-MESO-1)
- 10494-107B8 (mesothelioma cell line:ACC-MESO-4)
- 10624-108H3 (granulosa cell tumor cell line:KGN)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11236-116D3 (Endothelial Cells - Lymphatic, donor1)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002078 (meso-epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.61e-117 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_b18ed2809f04249b04b64cf18144be92 | p@chr6:3753188..3753192, - |
| 3.61e-117 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_b18ed2809f04249b04b64cf18144be92 | p@chr6:3753188..3753192, - |
| 1.28e-111 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_865d75356dd3140b8e78d5dd71764359 | p1@MIR216A |
| 1.28e-111 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_865d75356dd3140b8e78d5dd71764359 | p1@MIR216A |
| 9.18e-108 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_31ec0435d4df9b43d30ac002548e2838 | p@chr11:124761247..124761258, - |
| 9.18e-108 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_31ec0435d4df9b43d30ac002548e2838 | p@chr11:124761247..124761258, - |
| 1.26e-107 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_0fa26827e4e3da91c6ddc99b9f749fbb | p5@ICAM2 |
| 1.26e-107 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_0fa26827e4e3da91c6ddc99b9f749fbb | p5@ICAM2 |
| 5.39e-97 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_e701ccfec059c50762b70cb2c52813b9 | p@chr16:2220383..2220402, + |
| 5.39e-97 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_e701ccfec059c50762b70cb2c52813b9 | p@chr16:2220383..2220402, + |
| 2.31e-93 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_0dcb5814a9f62c9eed66384ae880f10a | p@chrX:71299684..71299699, + |
| 2.31e-93 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_0dcb5814a9f62c9eed66384ae880f10a | p@chrX:71299684..71299699, + |
| 2.59e-93 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_1c67b1e5cfcaedbdc92bda504f8a3985 | p1@ENST00000513158 |
| 2.59e-93 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_1c67b1e5cfcaedbdc92bda504f8a3985 | p1@ENST00000513158 |
| 1.06e-92 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_3252057c82e8ee23d38ef7c6a67159c7 | p@chr13:32835894..32835907, + |
| 1.06e-92 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_3252057c82e8ee23d38ef7c6a67159c7 | p@chr13:32835894..32835907, + |
| 4.79e-90 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_8cffd539e7ec0046620d83e2b5947a6a | p@chr18:33047117..33047138, - |
| 4.79e-90 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_8cffd539e7ec0046620d83e2b5947a6a | p@chr18:33047117..33047138, - |
| 6.7e-90 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_530aaf60263bcfc81b5e0312f8753d4a | p@chr18:33046982..33046991, - |
| 6.7e-90 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_530aaf60263bcfc81b5e0312f8753d4a | p@chr18:33046982..33046991, - |
| 7.52e-90 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_d2bb636066285299bb17378b8e8f51d3 | p@chr15:39423060..39423066, + |
| 7.52e-90 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_d2bb636066285299bb17378b8e8f51d3 | p@chr15:39423060..39423066, + |
| 8.67e-89 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_17df8e21066d2c3bc2faf45ec08e6e38 | p2@BMX |
| 8.67e-89 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_17df8e21066d2c3bc2faf45ec08e6e38 | p2@BMX |
| 8.68e-88 | FFCP PHASE1:Hg19::chr12:105863654..105863682,+#_c12819a03c65dbfd4b6d2b263a0fcf64 | p@chr12:105863654..105863682, + |
| 8.68e-88 | FFCP PHASE2:Hg19::chr12:105863654..105863682,+#_c12819a03c65dbfd4b6d2b263a0fcf64 | p@chr12:105863654..105863682, + |
| 1.94e-87 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_15f3e6257442d9c35d9d2bb7a8cfb708 | p6@CLEC14A |
| 1.94e-87 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_15f3e6257442d9c35d9d2bb7a8cfb708 | p6@CLEC14A |
| 8.81e-87 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_d2c3c083703c5c16578c009242905552 | p5@CLEC14A |
| 8.81e-87 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_d2c3c083703c5c16578c009242905552 | p5@CLEC14A |
| 2.0e-86 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_1366f614473e3d9a32ea4b971262ef78 | p@chr18:33047157..33047168, - |
| 2.0e-86 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_1366f614473e3d9a32ea4b971262ef78 | p@chr18:33047157..33047168, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:114422970..114422985,-#_ab2327fa167ab3045dff25e12b49065f | p@chr5:114422970..114422985, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:82209805..82209851,+#_ab2327fa167ab3045dff25e12b49065f | p@chr15:82209805..82209851, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:60398371..60398393,-#_ab2327fa167ab3045dff25e12b49065f | p@chr18:60398371..60398393, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:132405466..132405470,+#_ab2327fa167ab3045dff25e12b49065f | p@chr1:132405466..132405470, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:96429295..96429302,-#_ab2327fa167ab3045dff25e12b49065f | p@chr13:96429295..96429302, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:8471698..8471701,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:8471698..8471701, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:86691530..86691535,-#_ab2327fa167ab3045dff25e12b49065f | p@chr12:86691530..86691535, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:90508949..90508955,-#_ab2327fa167ab3045dff25e12b49065f | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:39513150..39513152,+#_ab2327fa167ab3045dff25e12b49065f | p@chr18:39513150..39513152, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:35093616..35093631,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35093616..35093631, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:124112234..124112240,+#_ab2327fa167ab3045dff25e12b49065f | p@chr5:124112234..124112240, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:57687477..57687488,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:57687477..57687488, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:107196799..107196814,+#_ab2327fa167ab3045dff25e12b49065f | p@chr11:107196799..107196814, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr7:87919399..87919406,+#_ab2327fa167ab3045dff25e12b49065f | p@chr7:87919399..87919406, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:25364645..25364655,+#_ab2327fa167ab3045dff25e12b49065f | p@chr12:25364645..25364655, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:60279719..60279737,-#_ab2327fa167ab3045dff25e12b49065f | p@chr10:60279719..60279737, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr19:29573929..29573932,+#_ab2327fa167ab3045dff25e12b49065f | p@chr19:29573929..29573932, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:35900327..35900366,+#_ab2327fa167ab3045dff25e12b49065f | p@chr18:35900327..35900366, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:82207617..82207621,+#_ab2327fa167ab3045dff25e12b49065f | p@chr15:82207617..82207621, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr18:5125608..5125613,+#_ab2327fa167ab3045dff25e12b49065f | p@chr18:5125608..5125613, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:54785454..54785456,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:54785454..54785456, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:34798555..34798562,+#_ab2327fa167ab3045dff25e12b49065f | p@chr17:34798555..34798562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:113550715..113550722,-#_ab2327fa167ab3045dff25e12b49065f | p@chr13:113550715..113550722, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr16:91441786..91441787,-#_ab2327fa167ab3045dff25e12b49065f | p@chr16:91441786..91441787, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:137487112..137487117,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:137487112..137487117, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:114123814..114123821,-#_ab2327fa167ab3045dff25e12b49065f | p@chr8:114123814..114123821, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:74684893..74684910,-#_ab2327fa167ab3045dff25e12b49065f | p@chr12:74684893..74684910, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:126939557..126939562,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:126939557..126939562, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:90270007..90270012,+#_ab2327fa167ab3045dff25e12b49065f | p@chr3:90270007..90270012, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr13:96429602..96429605,-#_ab2327fa167ab3045dff25e12b49065f | p@chr13:96429602..96429605, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:97402708..97402712,+#_ab2327fa167ab3045dff25e12b49065f | p@chr15:97402708..97402712, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr3:104857794..104857802,-#_ab2327fa167ab3045dff25e12b49065f | p@chr3:104857794..104857802, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:137487112..137487117,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:137487112..137487117, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr16:85547242..85547252,+#_ab2327fa167ab3045dff25e12b49065f | p@chr16:85547242..85547252, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr15:59435855..59435878,-#_ab2327fa167ab3045dff25e12b49065f | p@chr15:59435855..59435878, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr14:15179132..15179141,+#_ab2327fa167ab3045dff25e12b49065f | p8@Il3ra |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:118287827..118287833,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:118287827..118287833, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr18:47491114..47491123,+#_ab2327fa167ab3045dff25e12b49065f | p@chr18:47491114..47491123, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:42915101..42915106,-#_ab2327fa167ab3045dff25e12b49065f | p@chr9:42915101..42915106, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:93499468..93499494,-#_ab2327fa167ab3045dff25e12b49065f | p@chr10:93499468..93499494, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr2:129407463..129407468,-#_ab2327fa167ab3045dff25e12b49065f | p@chr2:129407463..129407468, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:32912678..32912687,+#_ab2327fa167ab3045dff25e12b49065f | p@chr5:32912678..32912687, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr4:86335502..86335509,+#_ab2327fa167ab3045dff25e12b49065f | p@chr4:86335502..86335509, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr17:35093764..35093773,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:35093764..35093773, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:94580525..94580530,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:94580525..94580530, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr12:8400090..8400093,+#_ab2327fa167ab3045dff25e12b49065f | p@chr12:8400090..8400093, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr1:173044327..173044331,+#_ab2327fa167ab3045dff25e12b49065f | p@chr1:173044327..173044331, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr11:48685851..48685860,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:48685851..48685860, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr12:88237840..88237851,-#_ab2327fa167ab3045dff25e12b49065f | p@chr12:88237840..88237851, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr10:85585991..85586025,-#_ab2327fa167ab3045dff25e12b49065f | p@chr10:85585991..85586025, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:117419958..117419964,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:117419958..117419964, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:34796428..34796430,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:34796428..34796430, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr5:53111093..53111095,+#_ab2327fa167ab3045dff25e12b49065f | p@chr5:53111093..53111095, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr13:113543694..113543702,-#_ab2327fa167ab3045dff25e12b49065f | p@chr13:113543694..113543702, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:114250006..114250039,-#_ab2327fa167ab3045dff25e12b49065f | p@chr8:114250006..114250039, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr11:117737077..117737096,-#_ab2327fa167ab3045dff25e12b49065f | p@chr11:117737077..117737096, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:93895817..93895819,-#_ab2327fa167ab3045dff25e12b49065f | p@chr10:93895817..93895819, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr6:51831254..51831256,-#_ab2327fa167ab3045dff25e12b49065f | p@chr6:51831254..51831256, - |
| 3.07e-86 | FFCP PHASE1:Mm9::chr5:64344878..64344887,-#_ab2327fa167ab3045dff25e12b49065f | p@chr5:64344878..64344887, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr15:90508949..90508955,-#_ab2327fa167ab3045dff25e12b49065f | p@chr15:90508949..90508955, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr8:87745380..87745385,+#_ab2327fa167ab3045dff25e12b49065f | p@chr8:87745380..87745385, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr17:48822294..48822295,-#_ab2327fa167ab3045dff25e12b49065f | p@chr17:48822294..48822295, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr2:11935531..11935538,-#_ab2327fa167ab3045dff25e12b49065f | p@chr2:11935531..11935538, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr7:87919399..87919406,+#_ab2327fa167ab3045dff25e12b49065f | p@chr7:87919399..87919406, + |
| 3.07e-86 | FFCP PHASE1:Mm9::chr4:62009160..62009164,-#_ab2327fa167ab3045dff25e12b49065f | p@chr4:62009160..62009164, - |
| 3.07e-86 | FFCP PHASE2:Mm9::chr9:62199266..62199267,+#_ab2327fa167ab3045dff25e12b49065f | p@chr9:62199266..62199267, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr10:85586219..85586227,+#_ab2327fa167ab3045dff25e12b49065f | p@chr10:85586219..85586227, + |
| 3.07e-86 | FFCP PHASE2:Mm9::chr3:9705000..9705004,-#_ab2327fa167ab3045dff25e12b49065f | p4@Pag1 |
