CL:0000457: Difference between revisions
From FANTOM5_SSTAR
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|name=biogenic amine secreting cell
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Revision as of 17:37, 15 June 2012
| Name: | biogenic amine secreting cell |
|---|---|
| Namespace: | cell |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000163(endocrine cell) |
|---|
Children
| is a: | CL:0000336 (adrenal gland;;adrenal medulla chromaffin cell),CL:0002274 (histamine secreting cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11486-119E1
- 11487-119E2 (Mast cell - stimulated, donor1)
- 11563-120D6 (Mast cell, donor1)
- 11564-120D7
- 11565-120D8 (Mast cell, donor2)
- 11566-120D9 (Mast cell, donor3)
- 11567-120E1 (Mast cell, donor4)
- 11939-126A4 (Mast cell, expanded, donor5)
- 11940-126A5 (Mast cell, expanded and stimulated, donor5)
- 11941-126A6 (Mast cell, expanded, donor8)
... further results Mouse (Mus musculus)
- 11486-119E1
- 11487-119E2 (Mast cell - stimulated, donor1)
- 11563-120D6 (Mast cell, donor1)
- 11564-120D7
- 11565-120D8 (Mast cell, donor2)
- 11566-120D9 (Mast cell, donor3)
- 11567-120E1 (Mast cell, donor4)
- 11939-126A4 (Mast cell, expanded, donor5)
- 11940-126A5 (Mast cell, expanded and stimulated, donor5)
- 11941-126A6 (Mast cell, expanded, donor8)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000457 (biogenic amine secreting cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
