UBERON:0003124: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0003124
|name=chorion
|namespace=
|def="The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mamm...") |
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:18, 15 June 2012
| Name: | chorion | ||
|---|---|---|---|
| Definition: | "The outer membrane of the two membranes enclosing the embryo in reptiles, birds, and mammals. In placental mammals it contributes to the development of the placenta[BTO]. Wikipedia: The chorion is one of the membranes that exists during pregnancy between the developing fetus and mother. It is formed by extraembryonic mesoderm and the two layers of trophoblast and surrounds the embryo and other membranes. The chorionic villi emerge from the chorion, invade the endometrium, and allow transfer of nutrients from maternal blood to fetal blood." [Wikipedia:Chorion] | ||
| Xrefs: |
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| Synonyms: | "chorion (vertebrates)" EXACT [] | ||
| Comments: | Development notes: Extra-embryonic ectoderm[PMID:19829370]. Taxon notes: The chorion of placentals is bilaminar as in reptiles and birds, but forms from the trophoblast and includes the ajdacent mesodermal layer [ISBN10:0073040584 "Vertebrates, Kardong"]. | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005631(extraembryonic membrane) |
|---|
Children
| disjoint from: | UBERON:0000920 (egg chorion) |
|---|---|
| develops from: | UBERON:0001987 (placenta) |
| part of: | FF:0000038 (human chorionic membrane stem cell sample),CL:0002541 (chorionic membrane mesenchymal stem cell) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 12238-129G6 (chorionic membrane cells, donor1)
- 12239-129G7 (chorionic membrane cells, donor2)
- 12240-129G8 (chorionic membrane cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003124 (chorion), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.61e-117 | FFCP PHASE1:Hg19::chr20:36794938..36794945,-#_b2df6c993a4945088e6a7e38bb2c88db | p45@TGM2 |
| 5.61e-117 | FFCP PHASE2:Hg19::chr20:36794938..36794945,-#_b2df6c993a4945088e6a7e38bb2c88db | p45@TGM2 |
| 3.15e-112 | FFCP PHASE1:Hg19::chr1:103299100..103299144,+#_20fc84fbfe72dc4a5c867c50ead65d03 | p@chr1:103299100..103299144, + |
| 3.15e-112 | FFCP PHASE2:Hg19::chr1:103299100..103299144,+#_20fc84fbfe72dc4a5c867c50ead65d03 | p@chr1:103299100..103299144, + |
| 8.12e-106 | FFCP PHASE2:Hg19::chr3:55384975..55384986,-#_81322874e48cfdd4687643c18237bf8b | p1@ENST00000469806 |
| 8.12e-106 | FFCP PHASE1:Hg19::chr3:55384975..55384986,-#_81322874e48cfdd4687643c18237bf8b | p1@ENST00000469806 |
| 1.58e-98 | FFCP PHASE1:Hg19::chr11:8857295..8857310,-#_820bd0572bdae8b30e402d2127b882a1 | p21@ST5 |
| 1.58e-98 | FFCP PHASE2:Hg19::chr11:8857295..8857310,-#_820bd0572bdae8b30e402d2127b882a1 | p21@ST5 |
| 3.76e-98 | FFCP PHASE1:Hg19::chr11:8857248..8857269,-#_2e95861edc3dd0d289d1ab405efd6e0d | p16@ST5 |
| 3.76e-98 | FFCP PHASE2:Hg19::chr11:8857248..8857269,-#_2e95861edc3dd0d289d1ab405efd6e0d | p16@ST5 |
| 1.83e-97 | FFCP PHASE1:Hg19::chr2:174891341..174891354,-#_58b367fe44fca1d8bb073c80b5a2360c | p@chr2:174891341..174891354, - |
| 1.83e-97 | FFCP PHASE2:Hg19::chr2:174891341..174891354,-#_58b367fe44fca1d8bb073c80b5a2360c | p@chr2:174891341..174891354, - |
| 1.18e-92 | FFCP PHASE2:Hg19::chr8:19936775..19936791,+#_574b236859c56ac889e93fd489300c9f | p2@ENST00000519197 |
| 1.18e-92 | FFCP PHASE1:Hg19::chr8:19936775..19936791,+#_574b236859c56ac889e93fd489300c9f | p2@ENST00000519197 |
| 4.94e-92 | FFCP PHASE1:Hg19::chr11:8857215..8857232,-#_72a2ae99647b497539c9c7e76e778d08 | p17@ST5 |
| 4.94e-92 | FFCP PHASE2:Hg19::chr11:8857215..8857232,-#_72a2ae99647b497539c9c7e76e778d08 | p17@ST5 |
| 3.52e-90 | FFCP PHASE2:Hg19::chr19:4234683..4234696,+#_dca8a7c9dfd2f22bb04cf3d84b72f288 | p@chr19:4234683..4234696, + |
| 3.52e-90 | FFCP PHASE2:Hg19::chr7:150553527..150553540,+#_dca8a7c9dfd2f22bb04cf3d84b72f288 | p10@ABP1 |
| 3.52e-90 | FFCP PHASE1:Hg19::chr7:150553527..150553540,+#_dca8a7c9dfd2f22bb04cf3d84b72f288 | p10@ABP1 |
| 3.52e-90 | FFCP PHASE1:Hg19::chr14:77951114..77951128,-#_dca8a7c9dfd2f22bb04cf3d84b72f288 | p9@ISM2 |
| 3.52e-90 | FFCP PHASE2:Hg19::chr14:77951114..77951128,-#_dca8a7c9dfd2f22bb04cf3d84b72f288 | p9@ISM2 |
| 3.52e-90 | FFCP PHASE1:Hg19::chr19:4234683..4234696,+#_dca8a7c9dfd2f22bb04cf3d84b72f288 | p@chr19:4234683..4234696, + |
| 4.43e-90 | FFCP PHASE2:Hg19::chr4:10616734..10616776,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr4:10616734..10616776, + |
| 4.43e-90 | FFCP PHASE1:Hg19::chr1:120056675..120056682,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr1:120056675..120056682, + |
| 4.43e-90 | FFCP PHASE2:Hg19::chr1:120056675..120056682,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr1:120056675..120056682, + |
| 4.43e-90 | FFCP PHASE1:Hg19::chr20:11850605..11850610,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr20:11850605..11850610, + |
| 4.43e-90 | FFCP PHASE2:Hg19::chr16:30123873..30123913,-#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr16:30123873..30123913, - |
| 4.43e-90 | FFCP PHASE2:Hg19::chr20:11850605..11850610,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr20:11850605..11850610, + |
| 4.43e-90 | FFCP PHASE1:Hg19::chr16:30123873..30123913,-#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr16:30123873..30123913, - |
| 4.43e-90 | FFCP PHASE1:Hg19::chr4:10616734..10616776,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr4:10616734..10616776, + |
| 4.43e-90 | FFCP PHASE2:Hg19::chr1:43987714..43987727,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr1:43987714..43987727, + |
| 4.43e-90 | FFCP PHASE1:Hg19::chr1:43987714..43987727,+#_7d4dc3ce246c8166dbec006d82dab1f3 | p@chr1:43987714..43987727, + |
| 5.58e-90 | FFCP PHASE2:Hg19::chr14:34509180..34509193,+#_fa6bb5527d1e8e1056adc5cf885fd113 | p1@ENST00000555922 |
| 5.58e-90 | FFCP PHASE1:Hg19::chr14:34509180..34509193,+#_fa6bb5527d1e8e1056adc5cf885fd113 | p1@ENST00000555922 |
| 5.58e-90 | FFCP PHASE2:Hg19::chr1:43987687..43987701,+#_fa6bb5527d1e8e1056adc5cf885fd113 | p@chr1:43987687..43987701, + |
| 5.58e-90 | FFCP PHASE1:Hg19::chr1:43987687..43987701,+#_fa6bb5527d1e8e1056adc5cf885fd113 | p@chr1:43987687..43987701, + |
| 5.58e-90 | FFCP PHASE1:Hg19::chr2:86094764..86094796,-#_fa6bb5527d1e8e1056adc5cf885fd113 | p9@ST3GAL5 |
| 5.58e-90 | FFCP PHASE2:Hg19::chr2:86094764..86094796,-#_fa6bb5527d1e8e1056adc5cf885fd113 | p9@ST3GAL5 |
| 5.11e-88 | FFCP PHASE1:Hg19::chrX:110507067..110507079,-#_e99d28219af1cfb914723434fa2a7e06 | p6@CAPN6 |
| 5.11e-88 | FFCP PHASE2:Hg19::chrX:110507067..110507079,-#_e99d28219af1cfb914723434fa2a7e06 | p6@CAPN6 |
| 1.05e-87 | FFCP PHASE2:Hg19::chr2:237683203..237683210,+#_a93425b79ebf03dbf03e21a184748bc8 | p@chr2:237683203..237683210, + |
| 1.05e-87 | FFCP PHASE1:Hg19::chr2:237683203..237683210,+#_a93425b79ebf03dbf03e21a184748bc8 | p@chr2:237683203..237683210, + |
| 1.5e-87 | FFCP PHASE1:Hg19::chr11:1950008..1950019,+#_89138a419ba14f43bfc70ac5aca066aa | p@chr11:1950008..1950019, + |
| 1.5e-87 | FFCP PHASE2:Hg19::chr11:1950008..1950019,+#_89138a419ba14f43bfc70ac5aca066aa | p@chr11:1950008..1950019, + |
| 2.15e-87 | FFCP PHASE1:Hg19::chr17:2278441..2278454,+#_286876a790a731a2d908dc2e4fffa406 | p13@SGSM2 |
| 2.15e-87 | FFCP PHASE2:Hg19::chr17:2278441..2278454,+#_286876a790a731a2d908dc2e4fffa406 | p13@SGSM2 |
| 1.11e-86 | FFCP PHASE2:Hg19::chr2:237683212..237683239,+#_426d7429c3a211158f16debe1699a1e6 | p@chr2:237683212..237683239, + |
| 1.11e-86 | FFCP PHASE1:Hg19::chr2:237683212..237683239,+#_426d7429c3a211158f16debe1699a1e6 | p@chr2:237683212..237683239, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27440741..27440750,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:27440741..27440750, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:4310640..4310648,+#_9d1158fd50cdaf34c974534aee2b4c8b | p59@Frmd4a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:35991777..35991786,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr17:35991777..35991786, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:89171538..89171544,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr3:89171538..89171544, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:4310640..4310648,+#_9d1158fd50cdaf34c974534aee2b4c8b | p59@Frmd4a |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:92613101..92613124,+#_9d1158fd50cdaf34c974534aee2b4c8b | p2@ENSMUST00000148919 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:137716644..137716651,-#_9d1158fd50cdaf34c974534aee2b4c8b | p5@Nsmce4a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:89171538..89171544,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr3:89171538..89171544, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:35991777..35991786,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr17:35991777..35991786, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:97907005..97907011,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr6:97907005..97907011, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:61041595..61041607,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:61041595..61041607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:69915427..69915460,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr14:69915427..69915460, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:8927606..8927607,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr17:8927606..8927607, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43250181..43250190,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:43250181..43250190, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27337717..27337754,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:27337717..27337754, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43250181..43250190,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:43250181..43250190, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:140663013..140663022,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr4:140663013..140663022, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:69915427..69915460,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr14:69915427..69915460, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27734346..27734351,-#_9d1158fd50cdaf34c974534aee2b4c8b | p2@Prl7a1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:140663013..140663022,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr4:140663013..140663022, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:97907005..97907011,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr6:97907005..97907011, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:8927606..8927607,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr17:8927606..8927607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:55273056..55273059,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr14:55273056..55273059, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:121053540..121053548,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr6:121053540..121053548, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:17788884..17788890,+#_9d1158fd50cdaf34c974534aee2b4c8b | p3@Psg29 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:55273056..55273059,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr14:55273056..55273059, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27335655..27335658,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:27335655..27335658, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27734346..27734351,-#_9d1158fd50cdaf34c974534aee2b4c8b | p2@Prl7a1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:17788884..17788890,+#_9d1158fd50cdaf34c974534aee2b4c8b | p3@Psg29 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:137716644..137716651,-#_9d1158fd50cdaf34c974534aee2b4c8b | p5@Nsmce4a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:121053540..121053548,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr6:121053540..121053548, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:61041595..61041607,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:61041595..61041607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27335655..27335658,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:27335655..27335658, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:27440741..27440750,+#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:27440741..27440750, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:27337717..27337754,-#_9d1158fd50cdaf34c974534aee2b4c8b | p@chr13:27337717..27337754, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:92613101..92613124,+#_9d1158fd50cdaf34c974534aee2b4c8b | p2@ENSMUST00000148919 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr16:70747947..70747956,+#_43c28df285224ba70a431dbf86c56d37 | p1@BC128395 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr9:118997516..118997525,+#_43c28df285224ba70a431dbf86c56d37 | p@chr9:118997516..118997525, + |
| 1.28e-84 | FFCP PHASE2:Hg19::chr6:22303026..22303033,-#_43c28df285224ba70a431dbf86c56d37 | p10@PRL |
| 1.28e-84 | FFCP PHASE1:Hg19::chr6:22303026..22303033,-#_43c28df285224ba70a431dbf86c56d37 | p10@PRL |
| 1.28e-84 | FFCP PHASE1:Hg19::chr14:77950741..77950750,-#_43c28df285224ba70a431dbf86c56d37 | p10@ISM2 |
| 1.28e-84 | FFCP PHASE1:Hg19::chr22:32957467..32957470,+#_43c28df285224ba70a431dbf86c56d37 | p@chr22:32957467..32957470, + |
| 1.28e-84 | FFCP PHASE2:Hg19::chr9:118997516..118997525,+#_43c28df285224ba70a431dbf86c56d37 | p@chr9:118997516..118997525, + |
| 1.28e-84 | FFCP PHASE1:Hg19::chr10:134275596..134275597,+#_43c28df285224ba70a431dbf86c56d37 | p@chr10:134275596..134275597, + |
| 1.28e-84 | FFCP PHASE2:Hg19::chr14:77950741..77950750,-#_43c28df285224ba70a431dbf86c56d37 | p10@ISM2 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr22:32957467..32957470,+#_43c28df285224ba70a431dbf86c56d37 | p@chr22:32957467..32957470, + |
| 1.28e-84 | FFCP PHASE1:Hg19::chr19:17423022..17423028,+#_43c28df285224ba70a431dbf86c56d37 | p@chr19:17423022..17423028, + |
| 1.28e-84 | FFCP PHASE1:Hg19::chr2:216693832..216693839,-#_43c28df285224ba70a431dbf86c56d37 | p@chr2:216693832..216693839, - |
| 1.28e-84 | FFCP PHASE2:Hg19::chr19:17423022..17423028,+#_43c28df285224ba70a431dbf86c56d37 | p@chr19:17423022..17423028, + |
| 1.28e-84 | FFCP PHASE2:Hg19::chr16:70747947..70747956,+#_43c28df285224ba70a431dbf86c56d37 | p1@BC128395 |
| 1.28e-84 | FFCP PHASE2:Hg19::chr2:216693832..216693839,-#_43c28df285224ba70a431dbf86c56d37 | p@chr2:216693832..216693839, - |
| 1.28e-84 | FFCP PHASE1:Hg19::chr7:150554537..150554542,+#_43c28df285224ba70a431dbf86c56d37 | p24@ABP1 |
