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Revision as of 17:16, 15 June 2012

Name:connective tissue
Definition:"Tissue with cells that deposit non-polarized extracellular matrix including connective tissue fibres and ground substance." [VAO:0000017]
Xrefs:
links:

AAO:0000098
BTO:0000421
EFO:0000952
EV:0100150
FMA:9640
GAID:100
galen:ConnectiveTissue
MA:0000011
MAT:0000301
MESH:A.02.340
MIAA:0000301
ncithesaurus:Connective_Tissue
OpenCyc:Mx4rv-aBgZwpEbGdrcN5Y29ycA
SCTID:361919005
VAO:0000017
XAO:0001017

ZFA:0001632
Synonyms: "Bindegewebe" RELATED [BTO:0000421]
"fascia" RELATED []
"portion of connective tissue" EXACT [FMA:9640]
"textus connectivus" EXACT []
Alt_id: UBERON:FMA_9640-FMA_9721-MA_0000011-MA_0000115-MIAA_0000301-XAO_0000173-XAO_0001017
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000479(tissue)



Children

is a:UBERON:0002242 (nucleus pulposus),UBERON:0003566 (head connective tissue),UBERON:0003586 (trunk connective tissue),UBERON:0003587 (limb connective tissue),UBERON:0004755 (skeletal tissue),UBERON:0007195 (stroma of bone marrow),UBERON:0007616 (layer of synovial tissue),UBERON:0007845 (regular connective tissue),UBERON:0011821 (irregular connective tissue),UBERON:0011823 (dense connective tissue)
part of:CL:0002320 (connective tissue cell),UBERON:0014716 (interlobular duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002384 (connective tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.97e-46FFCP PHASE2:Hg19::chr2:74781828..74781898,+#_0fbf49358d5dc16f8494ff543c429df4p1@DOK1
1.97e-46FFCP PHASE1:Hg19::chr2:74781828..74781898,+#_0fbf49358d5dc16f8494ff543c429df4p1@DOK1
1.25e-44FFCP PHASE2:Hg19::chr19:48828606..48828637,+#_a4b9082fe27dfcebb8b96a6447a7d4d3p2@EMP3
1.25e-44FFCP PHASE1:Hg19::chr19:48828606..48828637,+#_a4b9082fe27dfcebb8b96a6447a7d4d3p2@EMP3
2.2e-44FFCP PHASE1:Hg19::chr18:18691563..18691610,-#_6658bf400d69264f3c5e95a56cc83228p4@ROCK1
2.2e-44FFCP PHASE2:Hg19::chr18:18691563..18691610,-#_6658bf400d69264f3c5e95a56cc83228p4@ROCK1
2.56e-43FFCP PHASE1:Hg19::chr2:182322231..182322262,+#_75e69be84e59b6b1766631938532c779p2@ITGA4
2.56e-43FFCP PHASE2:Hg19::chr2:182322231..182322262,+#_75e69be84e59b6b1766631938532c779p2@ITGA4
2.59e-39FFCP PHASE1:Hg19::chr6:31704075..31704106,-#_a9b50f603ca3dd8287dc64399cd7236fp2@CLIC1
2.59e-39FFCP PHASE2:Hg19::chr6:31704075..31704106,-#_a9b50f603ca3dd8287dc64399cd7236fp2@CLIC1
3.82e-39FFCP PHASE1:Hg19::chr5:78281092..78281154,-#_a74849aa2e7bba35113021711bf581f9p1@ARSB
3.82e-39FFCP PHASE2:Hg19::chr5:78281092..78281154,-#_a74849aa2e7bba35113021711bf581f9p1@ARSB
9.75e-39FFCP PHASE2:Hg19::chr16:50300440..50300485,+#_9343f8c6f43ed81150247c562018f9d3p1@ADCY7
9.75e-39FFCP PHASE1:Hg19::chr16:50300440..50300485,+#_9343f8c6f43ed81150247c562018f9d3p1@ADCY7
6.32e-37FFCP PHASE1:Hg19::chr19:48828647..48828658,+#_fc6519b01f89e79a359c98f3f3199157p3@EMP3
6.32e-37FFCP PHASE2:Hg19::chr19:48828647..48828658,+#_fc6519b01f89e79a359c98f3f3199157p3@EMP3
2.86e-36FFCP PHASE1:Mm9::chr7:26474167..26474188,-#_82303a99aaa84b94f1fa424fb1893c3cp@chr7:26474167..26474188, -
2.86e-36FFCP PHASE2:Mm9::chr7:26474167..26474188,-#_82303a99aaa84b94f1fa424fb1893c3cp@chr7:26474167..26474188, -
9.13e-36FFCP PHASE1:Hg19::chr15:73076030..73076121,-#_f2462942f586ad3994bab53c609348afp1@ADPGK
9.13e-36FFCP PHASE2:Hg19::chr15:73076030..73076121,-#_f2462942f586ad3994bab53c609348afp1@ADPGK
9.23e-36FFCP PHASE1:Hg19::chrX:117629766..117629846,+#_12311cdf7fc012cfd3ee761e2f0183b9p1@DOCK11
9.23e-36FFCP PHASE2:Hg19::chrX:117629766..117629846,+#_12311cdf7fc012cfd3ee761e2f0183b9p1@DOCK11
1.92e-35FFCP PHASE1:Hg19::chr1:153518270..153518290,-#_106550cb1d4eecf17b8c77a5d996694dp1@S100A4
1.92e-35FFCP PHASE2:Hg19::chr1:153518270..153518290,-#_106550cb1d4eecf17b8c77a5d996694dp1@S100A4
4.91e-35FFCP PHASE1:Hg19::chr2:182322070..182322155,+#_4256e67cc94728e51a80357ac92d2351p1@ITGA4
4.91e-35FFCP PHASE2:Hg19::chr2:182322070..182322155,+#_4256e67cc94728e51a80357ac92d2351p1@ITGA4
9.11e-35FFCP PHASE1:Hg19::chr1:145096480..145096513,+#_6128198932042fa2d3bc6d7dc856f94fp2@SEC22B
9.11e-35FFCP PHASE2:Hg19::chr1:145096480..145096513,+#_6128198932042fa2d3bc6d7dc856f94fp2@SEC22B
1.92e-34FFCP PHASE1:Hg19::chr13:41635029..41635044,-#_436bc160958f88f69d7b3a7d584196bcp4@ELF1
1.92e-34FFCP PHASE2:Hg19::chr13:41635029..41635044,-#_436bc160958f88f69d7b3a7d584196bcp4@ELF1
2.29e-34FFCP PHASE1:Hg19::chr12:44152740..44152815,+#_9067574350721180e022e16112f5e2a7p1@IRAK4
2.29e-34FFCP PHASE2:Hg19::chr12:44152740..44152815,+#_9067574350721180e022e16112f5e2a7p1@IRAK4
2.61e-34FFCP PHASE2:Hg19::chr2:114647617..114647739,+#_4449cb7fb4253038995bf5ca98be11f5p1@ACTR3
2.61e-34FFCP PHASE1:Hg19::chr2:114647617..114647739,+#_4449cb7fb4253038995bf5ca98be11f5p1@ACTR3
2.06e-33FFCP PHASE1:Hg19::chr2:197036289..197036314,-#_1a83757417f83e9ab0aa094aaf091b45p1@STK17B
2.06e-33FFCP PHASE2:Hg19::chr2:197036289..197036314,-#_1a83757417f83e9ab0aa094aaf091b45p1@STK17B
5.24e-33FFCP PHASE1:Mm9::chr4:140255879..140255890,+#_62d2843f7c3d21d2ee2abec0837cf8d4p@chr4:140255879..140255890, +
5.24e-33FFCP PHASE2:Mm9::chr4:140255879..140255890,+#_62d2843f7c3d21d2ee2abec0837cf8d4p@chr4:140255879..140255890, +
6.42e-33FFCP PHASE1:Hg19::chr12:123920991..123921047,-#_0e49341e5db66977bd1e90fcd2247dfap1@RILPL2
6.42e-33FFCP PHASE2:Hg19::chr12:123920991..123921047,-#_0e49341e5db66977bd1e90fcd2247dfap1@RILPL2
6.83e-32FFCP PHASE2:Hg19::chr8:121824235..121824275,-#_282a7ebd217dda96ec06a9d959d96bddp1@SNTB1
6.83e-32FFCP PHASE1:Hg19::chr8:121824235..121824275,-#_282a7ebd217dda96ec06a9d959d96bddp1@SNTB1
7.73e-32FFCP PHASE1:Hg19::chr3:50378235..50378286,-#_ab8ec9c6cb9c7ef66af3a4d61012dce8p2@RASSF1
7.73e-32FFCP PHASE2:Hg19::chr3:50378235..50378286,-#_ab8ec9c6cb9c7ef66af3a4d61012dce8p2@RASSF1
1.33e-31FFCP PHASE1:Hg19::chr2:197036269..197036287,-#_4c1a18d90a0a6b8afa2db39170551bdbp2@STK17B
1.33e-31FFCP PHASE2:Hg19::chr2:197036269..197036287,-#_4c1a18d90a0a6b8afa2db39170551bdbp2@STK17B
1.47e-31FFCP PHASE1:Hg19::chr10:26727647..26727722,+#_4ae7c4f395c007185d675ecaa5a53891p2@APBB1IP
1.47e-31FFCP PHASE2:Hg19::chr10:26727647..26727722,+#_4ae7c4f395c007185d675ecaa5a53891p2@APBB1IP
1.76e-31FFCP PHASE2:Mm9::chr1:175560978..175561013,+#_03236aefd9ee8d4f838f2c0b87513b0ap1@Pyhin1
1.76e-31FFCP PHASE1:Mm9::chr1:175560978..175561013,+#_03236aefd9ee8d4f838f2c0b87513b0ap1@Pyhin1
2.4e-31FFCP PHASE1:Hg19::chrX:19905661..19905699,-#_a982da7b2723e37fb018620e3e2bd345p1@SH3KBP1
2.4e-31FFCP PHASE2:Hg19::chrX:19905661..19905699,-#_a982da7b2723e37fb018620e3e2bd345p1@SH3KBP1
3.87e-31FFCP PHASE1:Hg19::chr2:68592394..68592405,+#_4c81aa85bfd3ba2b57e6a9246f5b407cp2@PLEK
3.87e-31FFCP PHASE2:Hg19::chr2:68592394..68592405,+#_4c81aa85bfd3ba2b57e6a9246f5b407cp2@PLEK
4.92e-31FFCP PHASE1:Hg19::chr17:56415424..56415454,-#_84a22c2c29dfd49cb23a8bf672f91270p@chr17:56415424..56415454, -
4.92e-31FFCP PHASE2:Hg19::chr17:56415424..56415454,-#_84a22c2c29dfd49cb23a8bf672f91270p@chr17:56415424..56415454, -
5.49e-31FFCP PHASE1:Hg19::chr14:95982953..95982999,-#_d450ae6fa01ea403275c856cf162895ap@chr14:95982953..95982999, -
5.49e-31FFCP PHASE2:Hg19::chr14:95982953..95982999,-#_d450ae6fa01ea403275c856cf162895ap@chr14:95982953..95982999, -
5.6e-31FFCP PHASE1:Hg19::chr10:18948026..18948051,-#_67b1b0cb7d645887b12af0e9ebd51e5bp1@BC033534
5.6e-31FFCP PHASE2:Hg19::chr10:18948026..18948051,-#_67b1b0cb7d645887b12af0e9ebd51e5bp1@BC033534
6.88e-31FFCP PHASE2:Mm9::chr3:60407657..60407673,+#_b324d7fdf4cd1f38e7d376ddc2470518p@chr3:60407657..60407673, +
6.88e-31FFCP PHASE1:Mm9::chr3:60407657..60407673,+#_b324d7fdf4cd1f38e7d376ddc2470518p@chr3:60407657..60407673, +
1.17e-30FFCP PHASE1:Hg19::chr19:48828539..48828550,+#_89403f9e44caf9d9ed92066a9c1660d0p4@EMP3
1.17e-30FFCP PHASE2:Hg19::chr19:48828539..48828550,+#_89403f9e44caf9d9ed92066a9c1660d0p4@EMP3
1.2e-30FFCP PHASE2:Hg19::chr13:41593405..41593416,-#_d752a658bf27f7b63a6b278f777da974p9@ELF1
1.2e-30FFCP PHASE1:Hg19::chr13:41593405..41593416,-#_d752a658bf27f7b63a6b278f777da974p9@ELF1
4.56e-30FFCP PHASE2:Hg19::chr3:5229382..5229408,+#_e712ff6ccb10fc622f2785c834d2c3aap1@EDEM1
4.56e-30FFCP PHASE1:Hg19::chr3:5229382..5229408,+#_e712ff6ccb10fc622f2785c834d2c3aap1@EDEM1
4.67e-30FFCP PHASE2:Mm9::chr17:84587077..84587097,-#_58060cd50cbaa3714af30b78aa0250d2p4@Zfp36l2
4.67e-30FFCP PHASE1:Mm9::chr17:84587077..84587097,-#_58060cd50cbaa3714af30b78aa0250d2p4@Zfp36l2
5.73e-30FFCP PHASE2:Hg19::chr13:100153737..100153785,+#_d637cde1d724beebb71121090dd2049dp1@TM9SF2
5.73e-30FFCP PHASE1:Hg19::chr13:100153737..100153785,+#_d637cde1d724beebb71121090dd2049dp1@TM9SF2
6.96e-30FFCP PHASE1:Hg19::chr18:3449527..3449582,+#_cfc34a1323c1db55611eb8afb4817062p6@TGIF1
6.96e-30FFCP PHASE2:Hg19::chr18:3449527..3449582,+#_cfc34a1323c1db55611eb8afb4817062p6@TGIF1
1.15e-29FFCP PHASE1:Hg19::chr2:182322344..182322359,+#_7e830bb2dcfa449e6aa2af622d0eaec0p6@ITGA4
1.15e-29FFCP PHASE2:Hg19::chr2:182322344..182322359,+#_7e830bb2dcfa449e6aa2af622d0eaec0p6@ITGA4
1.92e-29FFCP PHASE2:Hg19::chr5:114938090..114938226,-#_d177330358f1a9c9ec31ff6d1beec0cbp1@TICAM2, p2@TMED7-TICAM2
1.92e-29FFCP PHASE1:Hg19::chr5:114938090..114938226,-#_d177330358f1a9c9ec31ff6d1beec0cbp1@TICAM2, p2@TMED7-TICAM2
1.95e-29FFCP PHASE2:Hg19::chr10:98480301..98480315,-#_16184999dea07d5d7b7559fb9a5fe336p3@PIK3AP1
1.95e-29FFCP PHASE1:Hg19::chr10:98480301..98480315,-#_16184999dea07d5d7b7559fb9a5fe336p3@PIK3AP1
2.03e-29FFCP PHASE2:Mm9::chr15:98860808..98860828,+#_c8e867ee223c92f8c0e15849a87f872ap3@Tuba1c
2.03e-29FFCP PHASE1:Mm9::chr15:98860808..98860828,+#_c8e867ee223c92f8c0e15849a87f872ap3@Tuba1c
2.21e-29FFCP PHASE1:Mm9::chrX:20723810..20723815,+#_75c19339570ecf8bb8cbb57cd175e507p1@uc009suo.1
2.21e-29FFCP PHASE2:Mm9::chrX:20723810..20723815,+#_75c19339570ecf8bb8cbb57cd175e507p1@uc009suo.1
3.02e-29FFCP PHASE2:Mm9::chr15:74789337..74789349,+#_3045ff4e1f08b5b69aa948b2560fa1a2p@chr15:74789337..74789349, +
3.02e-29FFCP PHASE1:Mm9::chr15:74789337..74789349,+#_3045ff4e1f08b5b69aa948b2560fa1a2p@chr15:74789337..74789349, +
3.2e-29FFCP PHASE2:Hg19::chr10:70847852..70847873,+#_5d761bf6957c46a74cb148ad8b17b67ep1@SRGN
3.2e-29FFCP PHASE1:Hg19::chr10:70847852..70847873,+#_5d761bf6957c46a74cb148ad8b17b67ep1@SRGN
3.22e-29FFCP PHASE2:Hg19::chr3:15837528..15837578,-#_971da769c7e00c0782bef58b05d172bcp@chr3:15837528..15837578, -
3.22e-29FFCP PHASE1:Hg19::chr3:15837528..15837578,-#_971da769c7e00c0782bef58b05d172bcp@chr3:15837528..15837578, -
4.35e-29FFCP PHASE2:Mm9::chr7:29166045..29166061,-#_15ec727a4b8ae18aef37eb8f098a6008p@chr7:29166045..29166061, -
4.35e-29FFCP PHASE1:Mm9::chr7:29166045..29166061,-#_15ec727a4b8ae18aef37eb8f098a6008p@chr7:29166045..29166061, -
5.68e-29FFCP PHASE2:Mm9::chr7:80684250..80684264,+#_df0d3d5eef676566103edd37964fd035p@chr7:80684250..80684264, +
5.68e-29FFCP PHASE1:Mm9::chr7:80684250..80684264,+#_df0d3d5eef676566103edd37964fd035p@chr7:80684250..80684264, +
5.89e-29FFCP PHASE1:Hg19::chr17:16319065..16319082,+#_5cf601d5e5d4df91b98f6d38f015963bp4@TRPV2
5.89e-29FFCP PHASE2:Hg19::chr17:16319065..16319082,+#_5cf601d5e5d4df91b98f6d38f015963bp4@TRPV2
6.27e-29FFCP PHASE2:Hg19::chr17:16319083..16319126,+#_102db80051401b96f20ed7c9ab5850e0p2@TRPV2
6.27e-29FFCP PHASE1:Hg19::chr17:16319083..16319126,+#_102db80051401b96f20ed7c9ab5850e0p2@TRPV2
6.76e-29FFCP PHASE2:Hg19::chr4:80994619..80994633,-#_a27207a75f083345e78bfb0d74a3808fp6@ANTXR2
6.76e-29FFCP PHASE1:Hg19::chr4:80994619..80994633,-#_a27207a75f083345e78bfb0d74a3808fp6@ANTXR2

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