UBERON:0002204: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0002204
|name=musculoskeletal system
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|def="Anatomical system that provides locomotion and physical support to the organism." [Wikipedia:Mus...") |
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Revision as of 17:15, 15 June 2012
| Name: | musculoskeletal system | ||
|---|---|---|---|
| Definition: | "Anatomical system that provides locomotion and physical support to the organism." [Wikipedia:Musculoskeletal_system, XB:curator] | ||
| Xrefs: |
| ||
| Synonyms: | "musculo-skeletal system" EXACT [] | ||
| Alt_id: | UBERON:FMA_7482-MA_0002418-XAO_0000168 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000467(anatomical system),UBERON:0004120(mesoderm-derived structure) |
|---|---|
| disjoint_from: | UBERON:0002294(biliary system),UBERON:0002330(exocrine system),UBERON:0002390(hematopoietic system),UBERON:0002405(immune system),UBERON:0002416(integumental system),UBERON:0002423(hepatobiliary system),UBERON:0004456(entire sense organ system) |
| develops_from: | UBERON:0000926(mesoderm) |
Children
| disjoint from: | UBERON:0000949 (endocrine system),UBERON:0000990 (reproductive system),UBERON:0001004 (respiratory system),UBERON:0001007 (digestive system),UBERON:0001008 (renal system),UBERON:0001009 (circulatory system),UBERON:0001016 (nervous system),UBERON:0001033 (gustatory system),UBERON:0001434 (skeletal system) |
|---|---|
| part of: | UBERON:0000043 (tendon),UBERON:0000383 (musculature of body),UBERON:0001434 (skeletal system),UBERON:0002418 (cartilage tissue) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10023-101D5 (skeletal muscle, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10048-101G3 (smooth muscle, adult, pool1)
- 10066-101I3 (skeletal muscle, fetal, donor1)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10094-102C4
- 10192-103E3 (bone marrow, adult)
- 10195-103E6 (olfactory region, adult)
- 10264-104D3
- 10267-104D6
... further results Mouse (Mus musculus)
- 10023-101D5 (skeletal muscle, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10048-101G3 (smooth muscle, adult, pool1)
- 10066-101I3 (skeletal muscle, fetal, donor1)
- 10069-101I6 (diaphragm, fetal, donor1)
- 10094-102C4
- 10192-103E3 (bone marrow, adult)
- 10195-103E6 (olfactory region, adult)
- 10264-104D3
- 10267-104D6
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002204 (musculoskeletal system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.27e-48 | FFCP PHASE1:Hg19::chr1:161187824..161187847,+#_b2b3f485fdff4fb5aa3b7cd17355dd95 | p@chr1:161187824..161187847, + |
| 5.27e-48 | FFCP PHASE2:Hg19::chr1:161187824..161187847,+#_b2b3f485fdff4fb5aa3b7cd17355dd95 | p@chr1:161187824..161187847, + |
| 6.7e-48 | FFCP PHASE1:Hg19::chr1:161188661..161188679,+#_05425af145c144b6dd139f33d45da3f5 | p@chr1:161188661..161188679, + |
| 6.7e-48 | FFCP PHASE2:Hg19::chr1:161188661..161188679,+#_05425af145c144b6dd139f33d45da3f5 | p@chr1:161188661..161188679, + |
| 2.1e-46 | FFCP PHASE1:Hg19::chr17:7483531..7483548,-#_21002080ac9221fdccef6d21bd016786 | p@chr17:7483531..7483548, - |
| 2.1e-46 | FFCP PHASE2:Hg19::chr17:7483531..7483548,-#_21002080ac9221fdccef6d21bd016786 | p@chr17:7483531..7483548, - |
| 9.31e-46 | FFCP PHASE2:Hg19::chr7:77050554..77050601,+#_ed42cfaab5483d633653b1923cc41668 | p@chr7:77050554..77050601, + |
| 9.31e-46 | FFCP PHASE1:Hg19::chr7:77050554..77050601,+#_ed42cfaab5483d633653b1923cc41668 | p@chr7:77050554..77050601, + |
| 2.23e-45 | FFCP PHASE2:Hg19::chr17:7482481..7482508,-#_883ae2d9132dccfd55bbcc91ea5aaf12 | p@chr17:7482481..7482508, - |
| 2.23e-45 | FFCP PHASE1:Hg19::chr17:7482481..7482508,-#_883ae2d9132dccfd55bbcc91ea5aaf12 | p@chr17:7482481..7482508, - |
| 4.82e-45 | FFCP PHASE2:Hg19::chr16:50313426..50313459,+#_139d289b12ca4ca16c589d137e496a03 | p@chr16:50313426..50313459, + |
| 4.82e-45 | FFCP PHASE1:Hg19::chr16:50313426..50313459,+#_139d289b12ca4ca16c589d137e496a03 | p@chr16:50313426..50313459, + |
| 1.31e-44 | FFCP PHASE2:Hg19::chr1:161188746..161188758,+#_0d8efcd62bf170b84a548f6a3715167e | p@chr1:161188746..161188758, + |
| 1.31e-44 | FFCP PHASE1:Hg19::chr1:161188746..161188758,+#_0d8efcd62bf170b84a548f6a3715167e | p@chr1:161188746..161188758, + |
| 3.73e-44 | FFCP PHASE1:Hg19::chr18:2847062..2847071,+#_b67e9a843e39932c8aafc0d055e1b7c2 | p7@EMILIN2 |
| 3.73e-44 | FFCP PHASE2:Hg19::chr18:2847062..2847071,+#_b67e9a843e39932c8aafc0d055e1b7c2 | p7@EMILIN2 |
| 5.47e-44 | FFCP PHASE2:Hg19::chr19:18288651..18288682,+#_a7864770367342d97d6df20a6bcb7a01 | p5@IFI30 |
| 5.47e-44 | FFCP PHASE1:Hg19::chr19:18288651..18288682,+#_a7864770367342d97d6df20a6bcb7a01 | p5@IFI30 |
| 6.06e-44 | FFCP PHASE2:Hg19::chr19:18288828..18288861,+#_b2e99a60913dc676093d688d9e2ffa08 | p7@IFI30 |
| 6.06e-44 | FFCP PHASE1:Hg19::chr19:18288828..18288861,+#_b2e99a60913dc676093d688d9e2ffa08 | p7@IFI30 |
| 2.48e-43 | FFCP PHASE1:Hg19::chr5:180242646..180242657,-#_ffb9607a7051207169683c777b049ae3 | p15@MGAT1 |
| 2.48e-43 | FFCP PHASE2:Hg19::chr5:180242646..180242657,-#_ffb9607a7051207169683c777b049ae3 | p15@MGAT1 |
| 6.58e-43 | FFCP PHASE1:Hg19::chr7:2832730..2832791,+#_fa5437c0926a17d375855c4bbe91fa52 | p@chr7:2832730..2832791, + |
| 6.58e-43 | FFCP PHASE2:Hg19::chr7:2832730..2832791,+#_fa5437c0926a17d375855c4bbe91fa52 | p@chr7:2832730..2832791, + |
| 8.21e-43 | FFCP PHASE2:Hg19::chr1:26602990..26603008,+#_4ce846b4fa01fbffff11746a1293a44d | p@chr1:26602990..26603008, + |
| 8.21e-43 | FFCP PHASE1:Hg19::chr1:26602990..26603008,+#_4ce846b4fa01fbffff11746a1293a44d | p@chr1:26602990..26603008, + |
| 1.68e-42 | FFCP PHASE2:Hg19::chr17:40168698..40168726,-#_f460c05e82aceb5e7c107e9f1ce83445 | p1@AK126179 |
| 1.68e-42 | FFCP PHASE1:Hg19::chr17:40168698..40168726,-#_f460c05e82aceb5e7c107e9f1ce83445 | p1@AK126179 |
| 1.97e-42 | FFCP PHASE1:Hg19::chr1:111743000..111743011,+#_3660c63b83b55ad7232c0abf7a146fb3 | p8@CHI3L2 |
| 1.97e-42 | FFCP PHASE2:Hg19::chr1:111743000..111743011,+#_3660c63b83b55ad7232c0abf7a146fb3 | p8@CHI3L2 |
| 2.1e-42 | FFCP PHASE1:Hg19::chr2:145276939..145276960,+#_1f324d62337d9cd028807a42ba8f513a | p2@ZEB2-AS1 |
| 2.1e-42 | FFCP PHASE2:Hg19::chr2:145276939..145276960,+#_1f324d62337d9cd028807a42ba8f513a | p2@ZEB2-AS1 |
| 7.01e-42 | FFCP PHASE2:Hg19::chr19:48828606..48828637,+#_8452a067e8ff6ea2cb0864c5c3516ded | p2@EMP3 |
| 7.01e-42 | FFCP PHASE1:Hg19::chr19:48828606..48828637,+#_8452a067e8ff6ea2cb0864c5c3516ded | p2@EMP3 |
| 8.34e-42 | FFCP PHASE2:Hg19::chr2:145429606..145429658,+#_a6e2e8959bcb6f680daf40f1caea55b4 | p@chr2:145429606..145429658, + |
| 8.34e-42 | FFCP PHASE1:Hg19::chr2:145429606..145429658,+#_a6e2e8959bcb6f680daf40f1caea55b4 | p@chr2:145429606..145429658, + |
| 8.67e-42 | FFCP PHASE1:Hg19::chr19:18288064..18288080,+#_acd44db170f98600fd8a29df2199bef4 | p@chr19:18288064..18288080, + |
| 8.67e-42 | FFCP PHASE2:Hg19::chr19:18288064..18288080,+#_acd44db170f98600fd8a29df2199bef4 | p@chr19:18288064..18288080, + |
| 9.66e-42 | FFCP PHASE2:Hg19::chr4:3387239..3387324,-#_91dd648e811d014b7469179baffe7132 | p@chr4:3387239..3387324, - |
| 9.66e-42 | FFCP PHASE1:Hg19::chr4:3387239..3387324,-#_91dd648e811d014b7469179baffe7132 | p@chr4:3387239..3387324, - |
| 1.07e-41 | FFCP PHASE2:Hg19::chrX:37664331..37664352,+#_a39bd43a98c1acebb0d6b270e1381fe0 | p@chrX:37664331..37664352, + |
| 1.07e-41 | FFCP PHASE1:Hg19::chrX:37664331..37664352,+#_a39bd43a98c1acebb0d6b270e1381fe0 | p@chrX:37664331..37664352, + |
| 1.41e-41 | FFCP PHASE1:Hg19::chr5:131280548..131280574,-#_c96e694abe2dde978dc39cecc9a09783 | p1@ENST00000425320 |
| 1.41e-41 | FFCP PHASE2:Hg19::chr5:131280548..131280574,-#_c96e694abe2dde978dc39cecc9a09783 | p1@ENST00000425320 |
| 2.86e-41 | FFCP PHASE1:Hg19::chr19:52299474..52299504,-#_b2de243a86ea81133cdba1f619bd0630 | p@chr19:52299474..52299504, - |
| 2.86e-41 | FFCP PHASE2:Hg19::chr19:52299474..52299504,-#_b2de243a86ea81133cdba1f619bd0630 | p@chr19:52299474..52299504, - |
| 3.69e-41 | FFCP PHASE1:Hg19::chr17:72542163..72542182,-#_ead5ae1b85b5760936c0144f04b65116 | p2@CD300C |
| 3.69e-41 | FFCP PHASE2:Hg19::chr17:72542163..72542182,-#_ead5ae1b85b5760936c0144f04b65116 | p2@CD300C |
| 4.28e-41 | FFCP PHASE2:Hg19::chr17:7484875..7484887,+#_257cb0ce8ed58e688a581c3f5b6f5d4e | p@chr17:7484875..7484887, + |
| 4.28e-41 | FFCP PHASE1:Hg19::chr17:7484875..7484887,+#_257cb0ce8ed58e688a581c3f5b6f5d4e | p@chr17:7484875..7484887, + |
| 5.25e-41 | FFCP PHASE2:Hg19::chr3:149531627..149531651,+#_5664f46662c27ff87ad556c836a0de20 | p7@RNF13 |
| 5.25e-41 | FFCP PHASE1:Hg19::chr3:149531627..149531651,+#_5664f46662c27ff87ad556c836a0de20 | p7@RNF13 |
| 5.5e-41 | FFCP PHASE2:Hg19::chr2:38358217..38358244,+#_b4c1369f7fc54e08b142ab4513d83d5a | p1@CYP1B1-AS1 |
| 5.5e-41 | FFCP PHASE1:Hg19::chr2:38358217..38358244,+#_b4c1369f7fc54e08b142ab4513d83d5a | p1@CYP1B1-AS1 |
| 7.86e-41 | FFCP PHASE2:Hg19::chr1:17944806..17944819,+#_65a1e7acd53711a11e5bdba5c279a629 | p10@ARHGEF10L |
| 7.86e-41 | FFCP PHASE1:Hg19::chr1:17944806..17944819,+#_65a1e7acd53711a11e5bdba5c279a629 | p10@ARHGEF10L |
| 8.28e-41 | FFCP PHASE2:Hg19::chr19:18288914..18288931,-#_c9d4f82074007e7f8ebff16e0209142a | p5@CU676849, p5@CU689079 |
| 8.28e-41 | FFCP PHASE1:Hg19::chr19:18288914..18288931,-#_c9d4f82074007e7f8ebff16e0209142a | p5@CU676849, p5@CU689079 |
| 1.3e-40 | FFCP PHASE2:Hg19::chr4:185314188..185314207,-#_74b9ffe49a504de1b16111ab3c54e4f3 | p@chr4:185314188..185314207, - |
| 1.3e-40 | FFCP PHASE1:Hg19::chr4:185314188..185314207,-#_74b9ffe49a504de1b16111ab3c54e4f3 | p@chr4:185314188..185314207, - |
| 1.39e-40 | FFCP PHASE2:Hg19::chr1:108593061..108593077,+#_0217a6c78c98b653cf556d87295231cd | p@chr1:108593061..108593077, + |
| 1.39e-40 | FFCP PHASE1:Hg19::chr1:108593061..108593077,+#_0217a6c78c98b653cf556d87295231cd | p@chr1:108593061..108593077, + |
| 1.51e-40 | FFCP PHASE2:Hg19::chr2:129283966..129283970,+#_16d6aada0f04d8ebc1c16d97159b7295 | p@chr2:129283966..129283970, + |
| 1.51e-40 | FFCP PHASE1:Hg19::chr2:129283966..129283970,+#_16d6aada0f04d8ebc1c16d97159b7295 | p@chr2:129283966..129283970, + |
| 1.56e-40 | FFCP PHASE1:Hg19::chrX:153286067..153286101,-#_afcb65d21f033d4a4f018752b7648960 | p@chrX:153286067..153286101, - |
| 1.56e-40 | FFCP PHASE2:Hg19::chrX:153286067..153286101,-#_afcb65d21f033d4a4f018752b7648960 | p@chrX:153286067..153286101, - |
| 1.76e-40 | FFCP PHASE1:Hg19::chr4:159727272..159727307,+#_be4386857ebab6346aea758b5fb4d575 | p7@FNIP2 |
| 1.76e-40 | FFCP PHASE2:Hg19::chr4:159727272..159727307,+#_be4386857ebab6346aea758b5fb4d575 | p7@FNIP2 |
| 1.8e-40 | FFCP PHASE1:Hg19::chr19:18286116..18286156,+#_1bca0615bf183aaa8c2cfe3f6b29066d | p@chr19:18286116..18286156, + |
| 1.8e-40 | FFCP PHASE2:Hg19::chr19:18286116..18286156,+#_1bca0615bf183aaa8c2cfe3f6b29066d | p@chr19:18286116..18286156, + |
| 1.81e-40 | FFCP PHASE1:Hg19::chr1:145610717..145610730,+#_405c0e82465a41164268eb7aea445dcc | p4@RNF115 |
| 1.81e-40 | FFCP PHASE2:Hg19::chr1:145610717..145610730,+#_405c0e82465a41164268eb7aea445dcc | p4@RNF115 |
| 2.17e-40 | FFCP PHASE1:Hg19::chr15:65174546..65174583,-#_1e0d322d9ee01520020a64b0881c3b5e | p@chr15:65174546..65174583, - |
| 2.17e-40 | FFCP PHASE2:Hg19::chr15:65174546..65174583,-#_1e0d322d9ee01520020a64b0881c3b5e | p@chr15:65174546..65174583, - |
| 2.44e-40 | FFCP PHASE2:Hg19::chr10:73648356..73648408,-#_a5cef4fe7b5b4a409ed4fbde1ec3de09 | p@chr10:73648356..73648408, - |
| 2.44e-40 | FFCP PHASE1:Hg19::chr10:73648356..73648408,-#_a5cef4fe7b5b4a409ed4fbde1ec3de09 | p@chr10:73648356..73648408, - |
| 2.73e-40 | FFCP PHASE2:Hg19::chr8:116588888..116588904,+#_4c395f22c7c2f0a32a401e4a51fabcea | p@chr8:116588888..116588904, + |
| 2.73e-40 | FFCP PHASE1:Hg19::chr8:116588888..116588904,+#_4c395f22c7c2f0a32a401e4a51fabcea | p@chr8:116588888..116588904, + |
| 2.82e-40 | FFCP PHASE1:Hg19::chr4:185314125..185314143,-#_f9e40c21413ff990bda76a70141e9b7b | p@chr4:185314125..185314143, - |
| 2.82e-40 | FFCP PHASE2:Hg19::chr4:185314125..185314143,-#_f9e40c21413ff990bda76a70141e9b7b | p@chr4:185314125..185314143, - |
| 5.58e-40 | FFCP PHASE2:Hg19::chr4:185314151..185314178,-#_a9efb3b9cb6177235edf1d7af0f9e1df | p@chr4:185314151..185314178, - |
| 5.58e-40 | FFCP PHASE1:Hg19::chr4:185314151..185314178,-#_a9efb3b9cb6177235edf1d7af0f9e1df | p@chr4:185314151..185314178, - |
| 5.77e-40 | FFCP PHASE2:Hg19::chr1:161188826..161188842,+#_aacbb30722fc86aa808a2cd873e83400 | p@chr1:161188826..161188842, + |
| 5.77e-40 | FFCP PHASE1:Hg19::chr1:161188826..161188842,+#_aacbb30722fc86aa808a2cd873e83400 | p@chr1:161188826..161188842, + |
| 6.01e-40 | FFCP PHASE1:Hg19::chr15:59469817..59469836,+#_ca5c31ed68a7601eccb72d670c19a73f | p@chr15:59469817..59469836, + |
| 6.01e-40 | FFCP PHASE2:Hg19::chr15:59469817..59469836,+#_ca5c31ed68a7601eccb72d670c19a73f | p@chr15:59469817..59469836, + |
| 6.16e-40 | FFCP PHASE1:Hg19::chr4:7655804..7655844,-#_c621b6e0040f6d87d3cb55376acc874b | p@chr4:7655804..7655844, - |
| 6.16e-40 | FFCP PHASE2:Hg19::chr4:7655804..7655844,-#_c621b6e0040f6d87d3cb55376acc874b | p@chr4:7655804..7655844, - |
| 8.97e-40 | FFCP PHASE1:Hg19::chr5:114938090..114938226,-#_0d17e5ca71a552de15ae0fd4fa031924 | p1@TICAM2, p2@TMED7-TICAM2 |
| 8.97e-40 | FFCP PHASE2:Hg19::chr5:114938090..114938226,-#_0d17e5ca71a552de15ae0fd4fa031924 | p1@TICAM2, p2@TMED7-TICAM2 |
| 1.5e-39 | FFCP PHASE1:Hg19::chr19:51625924..51625942,+#_798041aa0d3486e131044c05849e459c | p@chr19:51625924..51625942, + |
| 1.5e-39 | FFCP PHASE2:Hg19::chr19:51625924..51625942,+#_798041aa0d3486e131044c05849e459c | p@chr19:51625924..51625942, + |
| 1.88e-39 | FFCP PHASE1:Hg19::chr4:185266972..185267007,+#_9f4f9b55ed905fb7c43fc9db9ea5dc3f | p@chr4:185266972..185267007, + |
| 1.88e-39 | FFCP PHASE2:Hg19::chr4:185266972..185267007,+#_9f4f9b55ed905fb7c43fc9db9ea5dc3f | p@chr4:185266972..185267007, + |
| 2.79e-39 | FFCP PHASE2:Hg19::chr1:161188686..161188721,+#_688653296304777fdc305ee397659ab8 | p@chr1:161188686..161188721, + |
| 2.79e-39 | FFCP PHASE1:Hg19::chr1:161188686..161188721,+#_688653296304777fdc305ee397659ab8 | p@chr1:161188686..161188721, + |
| 3.46e-39 | FFCP PHASE1:Hg19::chr2:119726719..119726744,+#_6c47d9b0b50c34146bf8f973a0f19de6 | p@chr2:119726719..119726744, + |
| 3.46e-39 | FFCP PHASE2:Hg19::chr2:119726719..119726744,+#_6c47d9b0b50c34146bf8f973a0f19de6 | p@chr2:119726719..119726744, + |
| 3.93e-39 | FFCP PHASE2:Hg19::chr7:6066589..6066602,-#_2f1170739dc5445ed9a5bc517ea000d7 | p4@EIF2AK1 |
| 3.93e-39 | FFCP PHASE1:Hg19::chr7:6066589..6066602,-#_2f1170739dc5445ed9a5bc517ea000d7 | p4@EIF2AK1 |
