UBERON:0001855: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001855
|name=cochlear duct of membranous labyrinth
|namespace=
|def="An endolymph filled cavity inside the cochlea, located in between the scala tympa...") |
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|part_of=UBERON:0001844;;UBERON:0001849;;UBERON:0002499 | |part_of=UBERON:0001844;;UBERON:0001849;;UBERON:0002499 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
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Revision as of 17:13, 15 June 2012
Name: | cochlear duct of membranous labyrinth | ||
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Definition: | "An endolymph filled cavity inside the cochlea, located in between the scala tympani and the scala vestibuli, separated by the basilar membrane and Reissner's membrane (the vestibular membrane) respectively. Houses the organ of Corti[WP]." [Wikipedia:Cochlear_duct] | ||
Xrefs: |
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Synonyms: |
"cochlea duct" EXACT [NIF_GrossAnatomy:birnlex_2562] "cochlear aqueduct" RELATED [] "cochlear duct" EXACT [] "ductus cochlearis" RELATED [BTO:0001692] "membranous cochlea" RELATED [BTO:0001692] "Reissner's canal" EXACT [] "reissners canal" EXACT [NIF_GrossAnatomy:birnlex_2562] "scala media" RELATED [Wikipedia:Cochlear_duct] "scala medias" EXACT [NIF_GrossAnatomy:birnlex_2562] "scala of Loewenberg" RELATED [BTO:0001692] | ||
Comments: | TODO: check cochlear duct vs cochlear aqueduct vs scala media | ||
Alt_id: | UBERON:FMA_61119-MA_0000243 | ||
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000058(duct),UBERON:0004121(ectoderm-derived structure),UBERON:0005744(cranial conduit) |
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part_of: | UBERON:0001844(cochlea),UBERON:0001849(membranous labyrinth),UBERON:0002499(cochlear labyrinth) |
Children
part of: | UBERON:0002227 (spiral organ of cochlea) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001855 (cochlear duct of membranous labyrinth), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_1eba4701f2dfc2ab7dc48555b485e41e | p4@Chrna10 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_1eba4701f2dfc2ab7dc48555b485e41e | p4@Gipc3 |
1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Tmc1 |
1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_1eba4701f2dfc2ab7dc48555b485e41e | p2@9230102O04Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr14:102297728..102297742, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_1eba4701f2dfc2ab7dc48555b485e41e | p5@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr11:8405038..8405048, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr12:109905399..109905416, + |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_1eba4701f2dfc2ab7dc48555b485e41e | p10@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr18:81327205..81327211, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_1eba4701f2dfc2ab7dc48555b485e41e | p2@uc007rhb.1 |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_1eba4701f2dfc2ab7dc48555b485e41e | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr8:13414266..13414279, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Tomt |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr4:101908153..101908163, + |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr16:93971357..93971363, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr8:94180607..94180619, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_1eba4701f2dfc2ab7dc48555b485e41e | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr9:66860888..66860899, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr2:53464178..53464186, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_1eba4701f2dfc2ab7dc48555b485e41e | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_1eba4701f2dfc2ab7dc48555b485e41e | p2@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr15:89215319..89215330, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr13:58283583..58283607, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_1eba4701f2dfc2ab7dc48555b485e41e | p10@Sec11a |
1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr12:109905399..109905416, + |
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr16:93971357..93971363, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_1eba4701f2dfc2ab7dc48555b485e41e | p2@Slc26a5 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_1eba4701f2dfc2ab7dc48555b485e41e | p2@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Epyc |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_1eba4701f2dfc2ab7dc48555b485e41e | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr14:102297728..102297742, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_1eba4701f2dfc2ab7dc48555b485e41e | p2@Fscn2 |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr6:113251570..113251578, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_1eba4701f2dfc2ab7dc48555b485e41e | p15@Mctp1 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_1eba4701f2dfc2ab7dc48555b485e41e | p41@Cacnb2 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr10:67371994..67372010, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr1:172843885..172843890, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Tmc1 |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr3:154459184..154459195, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr14:47293496..47293510, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr7:133957514..133957529, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr5:72652660..72652667, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr13:78257454..78257465, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr17:13983198..13983203, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Otog |
1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr13:43699188..43699216, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr19:55256373..55256384, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_1eba4701f2dfc2ab7dc48555b485e41e | p2@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr14:20649897..20649907, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr1:60561636..60561645, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_1eba4701f2dfc2ab7dc48555b485e41e | p7@Glt25d2 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_1eba4701f2dfc2ab7dc48555b485e41e | p9@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr13:58283583..58283607, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_1eba4701f2dfc2ab7dc48555b485e41e | p1@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr1:93235253..93235264, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr11:4689837..4689845, - |
1.87e-86 | FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr8:94180607..94180619, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr3:154459231..154459240, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_1eba4701f2dfc2ab7dc48555b485e41e | p4@uc007rhb.1 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr1:182528371..182528385, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr15:65641741..65641748, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr12:13572961..13572974, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_1eba4701f2dfc2ab7dc48555b485e41e | p18@Trpm3 |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr14:102297747..102297765, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_1eba4701f2dfc2ab7dc48555b485e41e | p3@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr15:65641741..65641748, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_1eba4701f2dfc2ab7dc48555b485e41e | p41@Cacnb2 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_1eba4701f2dfc2ab7dc48555b485e41e | p6@Jag1 |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr12:109905468..109905474, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_1eba4701f2dfc2ab7dc48555b485e41e | p@chr17:13983179..13983190, + |