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(Created page with "{{DOID |id=DOID:3904 |name=bronchogenic carcinoma |namespace= |def= |xref= |is_a=DOID:1325 |synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];...")
 
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|id=DOID:3904
|id=DOID:3904
|name=bronchogenic carcinoma
|name=bronchogenic carcinoma
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=MSH:D002283;;NCI:C35875;;SNOMEDCT_2010_1_31:154485001;;SNOMEDCT_2010_1_31:254622008;;SNOMEDCT_2010_1_31:269561006;;SNOMEDCT_2010_1_31:363493006;;UMLS_CUI:C0007121
|is_a=DOID:1325
|is_a=DOID:1325
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 14:00, 11 June 2012

Name:bronchogenic carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D002283
NCI:C35875
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:254622008
SNOMEDCT_2010_1_31:269561006
SNOMEDCT_2010_1_31:363493006

UMLS_CUI:C0007121
Synonyms: "BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008]
"bronchial cancer" EXACT [CSP2005:2017-5516]
"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875]
"bronchogenic carcinoma" EXACT [CSP2005:2017-6052]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1325(bronchus cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3904 (bronchogenic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr8:98104439..98104444,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98104439..98104444, -
1.78e-29FFCP PHASE2:Hg19::chr8:1616323..1616360,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:1616323..1616360, +
1.78e-29FFCP PHASE2:Hg19::chr5:33619084..33619089,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:33619084..33619089, -
1.78e-29FFCP PHASE2:Hg19::chr3:145094664..145094665,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:145094664..145094665, +
1.78e-29FFCP PHASE2:Hg19::chr11:31093041..31093047,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:31093041..31093047, -
1.78e-29FFCP PHASE1:Hg19::chr2:234862409..234862414,+#_39df5efeecaef77fad20cc2f4b578036p14@TRPM8
1.78e-29FFCP PHASE2:Hg19::chrX:154251771..154251775,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:154251771..154251775, -
1.78e-29FFCP PHASE1:Hg19::chr11:98528704..98528712,+#_39df5efeecaef77fad20cc2f4b578036p@chr11:98528704..98528712, +
1.78e-29FFCP PHASE2:Hg19::chr10:129704512..129704515,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704512..129704515, +
1.78e-29FFCP PHASE1:Hg19::chr9:97856010..97856019,+#_39df5efeecaef77fad20cc2f4b578036p@chr9:97856010..97856019, +
1.78e-29FFCP PHASE1:Hg19::chr4:37653629..37653673,-#_39df5efeecaef77fad20cc2f4b578036p@chr4:37653629..37653673, -
1.78e-29FFCP PHASE1:Hg19::chr3:87647430..87647437,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:87647430..87647437, -
1.78e-29FFCP PHASE1:Hg19::chr21:38295313..38295326,-#_39df5efeecaef77fad20cc2f4b578036p@chr21:38295313..38295326, -
1.78e-29FFCP PHASE1:Hg19::chr12:84126726..84126727,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:84126726..84126727, -
1.78e-29FFCP PHASE2:Hg19::chr6:125378772..125378777,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:125378772..125378777, +
1.78e-29FFCP PHASE1:Hg19::chr5:6961030..6961034,+#_39df5efeecaef77fad20cc2f4b578036p@chr5:6961030..6961034, +
1.78e-29FFCP PHASE1:Hg19::chr12:15722105..15722121,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:15722105..15722121, +
1.78e-29FFCP PHASE2:Hg19::chr2:97626375..97626385,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626375..97626385, -
1.78e-29FFCP PHASE1:Hg19::chr11:42142040..42142055,+#_39df5efeecaef77fad20cc2f4b578036p@chr11:42142040..42142055, +
1.78e-29FFCP PHASE2:Hg19::chr14:60194267..60194275,-#_39df5efeecaef77fad20cc2f4b578036p20@RTN1
1.78e-29FFCP PHASE2:Hg19::chr13:76688920..76688924,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76688920..76688924, +
1.78e-29FFCP PHASE1:Hg19::chr7:95766136..95766143,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:95766136..95766143, -
1.78e-29FFCP PHASE1:Hg19::chr2:208001650..208001675,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:208001650..208001675, -
1.78e-29FFCP PHASE2:Hg19::chr3:86701921..86701925,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:86701921..86701925, -
1.78e-29FFCP PHASE2:Hg19::chr17:59657604..59657621,-#_39df5efeecaef77fad20cc2f4b578036p@chr17:59657604..59657621, -
1.78e-29FFCP PHASE1:Hg19::chr8:73794113..73794122,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:73794113..73794122, +
1.78e-29FFCP PHASE1:Hg19::chr5:134915254..134915270,-#_39df5efeecaef77fad20cc2f4b578036p3@CXCL14
1.78e-29FFCP PHASE1:Hg19::chr2:97626185..97626188,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626185..97626188, -
1.78e-29FFCP PHASE1:Hg19::chr1:219599419..219599426,-#_39df5efeecaef77fad20cc2f4b578036p@chr1:219599419..219599426, -
1.78e-29FFCP PHASE1:Hg19::chr10:66459172..66459188,-#_39df5efeecaef77fad20cc2f4b578036p@chr10:66459172..66459188, -
1.78e-29FFCP PHASE1:Hg19::chr13:92569013..92569022,-#_39df5efeecaef77fad20cc2f4b578036p@chr13:92569013..92569022, -
1.78e-29FFCP PHASE2:Hg19::chr2:189756256..189756260,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:189756256..189756260, +
1.78e-29FFCP PHASE2:Hg19::chr18:74671119..74671124,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:74671119..74671124, +
1.78e-29FFCP PHASE2:Hg19::chr12:88178319..88178329,-#_39df5efeecaef77fad20cc2f4b578036p2@MKRN9P
1.78e-29FFCP PHASE1:Hg19::chr7:44574327..44574332,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:44574327..44574332, -
1.78e-29FFCP PHASE1:Hg19::chr3:86701885..86701893,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:86701885..86701893, -
1.78e-29FFCP PHASE1:Hg19::chr21:26144899..26144920,-#_39df5efeecaef77fad20cc2f4b578036p@chr21:26144899..26144920, -
1.78e-29FFCP PHASE1:Hg19::chr18:39258990..39258996,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:39258990..39258996, -
1.78e-29FFCP PHASE1:Hg19::chr17:58979826..58979836,+#_39df5efeecaef77fad20cc2f4b578036p@chr17:58979826..58979836, +
1.78e-29FFCP PHASE2:Hg19::chr3:194808375..194808396,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:194808375..194808396, +
1.78e-29FFCP PHASE2:Hg19::chr20:2779236..2779242,-#_39df5efeecaef77fad20cc2f4b578036p12@CPXM1
1.78e-29FFCP PHASE2:Hg19::chr1:181360250..181360259,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:181360250..181360259, +
1.78e-29FFCP PHASE1:Hg19::chr8:98080543..98080550,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98080543..98080550, -
1.78e-29FFCP PHASE1:Hg19::chr6:169224860..169224875,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:169224860..169224875, +
1.78e-29FFCP PHASE1:Hg19::chr11:20538015..20538023,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:20538015..20538023, -
1.78e-29FFCP PHASE2:Hg19::chr18:10085504..10085505,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:10085504..10085505, +
1.78e-29FFCP PHASE2:Hg19::chr14:58448696..58448733,-#_39df5efeecaef77fad20cc2f4b578036p9@SLC35F4
1.78e-29FFCP PHASE1:Hg19::chr7:138721040..138721056,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:138721040..138721056, +
1.78e-29FFCP PHASE2:Hg19::chr4:178653531..178653568,+#_39df5efeecaef77fad20cc2f4b578036p@chr4:178653531..178653568, +
1.78e-29FFCP PHASE1:Hg19::chr10:129704473..129704478,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704473..129704478, +
1.78e-29FFCP PHASE2:Hg19::chr3:78360347..78360353,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:78360347..78360353, +
1.78e-29FFCP PHASE2:Hg19::chr18:33311016..33311032,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:33311016..33311032, -
1.78e-29FFCP PHASE2:Hg19::chr13:92569013..92569022,-#_39df5efeecaef77fad20cc2f4b578036p@chr13:92569013..92569022, -
1.78e-29FFCP PHASE2:Hg19::chr12:58158560..58158567,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:58158560..58158567, -
1.78e-29FFCP PHASE1:Hg19::chr15:96959907..96959930,+#_39df5efeecaef77fad20cc2f4b578036p@chr15:96959907..96959930, +
1.78e-29FFCP PHASE2:Hg19::chr7:79840117..79840122,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:79840117..79840122, +
1.78e-29FFCP PHASE1:Hg19::chr7:26657673..26657685,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26657673..26657685, -
1.78e-29FFCP PHASE1:Hg19::chr2:135120480..135120481,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:135120480..135120481, +
1.78e-29FFCP PHASE2:Hg19::chr8:38441630..38441635,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:38441630..38441635, +
1.78e-29FFCP PHASE1:Hg19::chr12:65516484..65516493,-#_39df5efeecaef77fad20cc2f4b578036p@chr12:65516484..65516493, -
1.78e-29FFCP PHASE2:Hg19::chr1:168756303..168756308,+#_39df5efeecaef77fad20cc2f4b578036p1@MGC4473
1.78e-29FFCP PHASE2:Hg19::chr12:15722105..15722121,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:15722105..15722121, +
1.78e-29FFCP PHASE1:Hg19::chr8:98015616..98015617,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98015616..98015617, -
1.78e-29FFCP PHASE1:Hg19::chr6:154710410..154710428,-#_39df5efeecaef77fad20cc2f4b578036p@chr6:154710410..154710428, -
1.78e-29FFCP PHASE2:Hg19::chr2:220594691..220594695,+#_39df5efeecaef77fad20cc2f4b578036p4@ENST00000442416
1.78e-29FFCP PHASE2:Hg19::chr2:103235132..103235142,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:103235132..103235142, +
1.78e-29FFCP PHASE2:Hg19::chr17:79974020..79974025,+#_39df5efeecaef77fad20cc2f4b578036p@chr17:79974020..79974025, +
1.78e-29FFCP PHASE2:Hg19::chr13:25269076..25269105,-#_39df5efeecaef77fad20cc2f4b578036p@chr13:25269076..25269105, -
1.78e-29FFCP PHASE2:Hg19::chr10:29213612..29213644,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:29213612..29213644, +
1.78e-29FFCP PHASE1:Hg19::chrX:135761931..135761934,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:135761931..135761934, -

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