Personal tools

FFCP PHASE1:Mm9::chr9:114310210..114310251,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000160!8.75e-09!43;UBERON:0005409!4.99e-07!59
|phase1_expression=15.534438169165,10.1202868215415,18.654968814971,15.1232105653415,17.0304548181758,16.2842893754533,16.5864974822823,15.1074288426644,6.05391505252167,6.08567768437183,4.62288514208863,8.05698805852898,15.0656642339461,13.4627419725256,5.99597571268193,8.50396123037269,6.99561878128147,13.7226041930833,17.9619908023518,17.8243653755173,14.627445905984,17.4752074113558,17.5003858723087,24.9588179557714,29.3643879765978,16.0784949952206,19.3842898271584,21.5471232685889,37.8146604718184,32.763916868791,27.7163138319131,6.98533740805594,10.4561013889377,0,16.1756907060714,20.1143920883776,18.3752420636132,9.20769587621197,10.9386948233332,13.088093599345,4.1176204162171,8.87959130445979,12.1377588257788,21.150665419897,20.2753862439029,24.4117180375036,33.6428278069657,25.7269684528927,27.6804590245434,27.0257559713254,29.9570942278276,46.0008205967909,9.89917375740644,22.4862264023517,15.7964085596958,22.3815709351274,28.6533439938757,25.7836046138721,9.71119012126069,11.6378015439847,12.6766280701236,21.3472055203553,24.0109594950008,71.0920776652305,94.9311708064295,85.9680939084781,42.5432156936135,33.0427742576537,7.67303131082735,9.04539786822327,10.5162480675691,19.1386159550548,13.4729809980484,9.0643191419066,8.4344014496048,8.27296907949019,18.7196997698961,9.83192503255945,13.9781945263182,11.2103344570665,13.9976094711687,10.939180781692,13.4007839520663,14.069065250792,11.0014738399303,10.9012576625257,12.2439645487229,12.3023634244698,6.81535739998656,13.8295954995417,21.7398366526258,15.487629785665,6.11974200336975,9.71465744948071,12.9955283489534,13.4408066129201,12.4995533917259,24.5419664512403,27.2775304833012,21.9070536196411,12.2533775205712,29.5150898052931,20.3844191765317,7.11066703153331,26.4119070033681,23.5624674891842,19.2099289105618,14.7297204837587,18.9024655062435,19.7428044956217,12.3174582003956,20.7036525252256,20.2941637585331,19.2924979907357,22.694620477191,18.598655516792,67.9786161269528,12.0017466243527,18.5768215909474,12.9413479957927,10.6003928860989,16.9706338597328,48.4618579167118,10.8328894894272,7.95897485891129,16.860165643767,21.2072770375479,22.1964010467561,19.0605340609597,12.8819949888148,8.6925114535539,7.53926112677186,13.0368240144207,14.5757810678288,12.8828587626927,10.8701646255398,21.9973025916683,23.5129174453076,51.5554427204696,9.46988351489133,8.58794923553845,7.35686734187113,10.803727788321,11.3028613376786,12.3826428455417,8.96796041993949,9.46387418053261,9.05461797586555,9.7005596819779,9.64441008855878,10.7330185740009,12.4941567483718,11.9560317167007,16.716103993064,13.9931852757402,11.5439874754726,25.2796747432765,25.4774428043568,24.1538974486254,15.9486844852336,12.8989332989603,16.0255234700303,22.7274946161802,16.3314312350345,13.1127045954272,16.7424440220294,16.3646774853768,14.7124331382634,8.55711219550098,12.148392341853,11.5928397650574,11.4035990191759,14.7098577245004,15.2995317386824,9.04246778825747,11.7311258112384,10.2429822724977,13.7514294665043,6.39864751605702,7.89604684325491,24.3559501898756,53.4461340251858,80.5008518718431,85.6015317506516,20.404749646414,118.912645310736,58.0584332328623,67.4462440219501,66.48275370762,18.8752075817387,20.3169766882213,26.6849306160852,11.7594098590911,9.93962059704641,29.3040112750009,22.1979947351393,20.9468686141036,25.5995742599663,29.9108820597737,26.4222164883488,33.2837303023715,37.5127378322274,13.933273473096,8.67594549723689,9.04171377520734,8.54476027062444,10.1430060694251,10.8529721888588,14.0044218479781,12.6586300478357,10.8630601939274,11.2570179407113,20.1275489138296,16.0020607497456,11.8574315783533,12.1237861414614,10.5844473977928,11.5786445127208,14.5955020231618,10.0430448238357,11.7334783038259,12.0519010900384,12.2038929110021,18.4256883185997,18.5674039891091,13.4642217021881,14.817703545982,15.5025282754142,15.7860220970912,15.8947415274266,14.850908440467,15.4774492682217,40.7136466636035,33.1782467129413,33.4399705652945,23.1786866895975,13.1651483789989,12.8932855251423,11.3115112309906,9.59389523376617,9.4652465824877,14.055794794679,9.26320610251035,14.8160654730582,14.704712489438,13.0215204162863,14.1683745586213,14.9050487534769,14.6256477840214,9.63963949265421,22.9942938037395,18.16269157406,17.4289046508326,24.4155781999352,26.5490276679926,17.7229864393136,21.7672961014621,27.1591314848493,30.4160949667196,18.1386737286917,28.1686839553361,18.1766864738753,20.6768479463138,18.6461687182131,33.7339547439996,19.5957532171555,20.7668159509811,10.2634823597847,10.6074120701859,14.1462443120851,18.0887038315119,16.2315624017884,20.7331765958672,24.3571959291679,17.835049812842,31.1393144169816,73.4359565523023,11.5420377059036,16.6308359496783,9.71038091343309,10.9822556482886,8.69946768648825,25.0673519501672,14.2777482548092,11.1066072518604,14.0343070214991,15.0007567169466,7.72310673719233,7.79157098009843,8.00723606222829,14.4481665494777,18.1936888020755,19.2097963588149,21.0027535963325,9.80641580101519,16.4688768372747,18.468913280528,18.3997700492732,25.5484199583028,12.6772485601731,17.4398791580459,22.2492550686425,35.7737326285348,9.32008969630389,1.12738587736838,14.8021380583539,12.0784698033681,15.3616438791798,15.37001899385,17.4024809255502,19.5986588538409,12.8902340995511,9.33248165388827,3.8653459332161,3.45636007509439,16.4325782726653,13.1771389938607,12.9415806027682,13.5117655896907,15.0382424360684,17.6826405755326,12.8609130986367,14.6212631902831,13.024672043311,15.317568137655,14.518970659705,13.3517296613461,15.9711657122947,21.0378423926824,7.48210265930198,13.0971712490698,5.11368982674011,10.9125000636651,17.0006842748328,45.2314765837349,28.2053501371588,12.862102744744,72.2263829810923,16.942555278512,14.2700823317225,13.7494923225455,11.8578695817144,11.6464028361009,12.8416962556249,18.2256075062588,10.8077088773813,9.5159905886683,12.9440077937955,2.69847103718859,8.37952234142165,11.0976843740187,10.6966955510049,5.03071590307158,6.80220981265052,15.3350242183115,17.512979865306,18.2923949467335,19.2049880940486,17.4900716924265,14.9014809695,14.0462261204824,15.173961119954,13.5547706735247,14.2888107384922,17.1508802398386,11.1887347868949,11.9504911232959,14.1310963329021,15.0862471049583,15.4403951358624,12.3986818772607,15.2613737463945,14.3987352035456,13.8767956942349,12.9878860739669,10.2597187460759,14.9384525230448,19.6399795080208,13.64302708428,14.2831499444567,13.5046244245997,12.3949472948773,19.4835677090953,20.2346568129736,21.0538447600868,21.7019764588781,15.4943548975763,13.8972594045295,12.2889952878823
|phase1_expression=15.534438169165,10.1202868215415,18.654968814971,15.1232105653415,17.0304548181758,16.2842893754533,16.5864974822823,15.1074288426644,6.05391505252167,6.08567768437183,4.62288514208863,8.05698805852898,15.0656642339461,13.4627419725256,5.99597571268193,8.50396123037269,6.99561878128147,13.7226041930833,17.9619908023518,17.8243653755173,14.627445905984,17.4752074113558,17.5003858723087,24.9588179557714,29.3643879765978,16.0784949952206,19.3842898271584,21.5471232685889,37.8146604718184,32.763916868791,27.7163138319131,6.98533740805594,10.4561013889377,0,16.1756907060714,20.1143920883776,18.3752420636132,9.20769587621197,10.9386948233332,13.088093599345,4.1176204162171,8.87959130445979,12.1377588257788,21.150665419897,20.2753862439029,24.4117180375036,33.6428278069657,25.7269684528927,27.6804590245434,27.0257559713254,29.9570942278276,46.0008205967909,9.89917375740644,22.4862264023517,15.7964085596958,22.3815709351274,28.6533439938757,25.7836046138721,9.71119012126069,11.6378015439847,12.6766280701236,21.3472055203553,24.0109594950008,71.0920776652305,94.9311708064295,85.9680939084781,42.5432156936135,33.0427742576537,7.67303131082735,9.04539786822327,10.5162480675691,19.1386159550548,13.4729809980484,9.0643191419066,8.4344014496048,8.27296907949019,18.7196997698961,9.83192503255945,13.9781945263182,11.2103344570665,13.9976094711687,10.939180781692,13.4007839520663,14.069065250792,11.0014738399303,10.9012576625257,12.2439645487229,12.3023634244698,6.81535739998656,13.8295954995417,21.7398366526258,15.487629785665,6.11974200336975,9.71465744948071,12.9955283489534,13.4408066129201,12.4995533917259,24.5419664512403,27.2775304833012,21.9070536196411,12.2533775205712,29.5150898052931,20.3844191765317,7.11066703153331,26.4119070033681,23.5624674891842,19.2099289105618,14.7297204837587,18.9024655062435,19.7428044956217,12.3174582003956,20.7036525252256,20.2941637585331,19.2924979907357,22.694620477191,18.598655516792,67.9786161269528,12.0017466243527,18.5768215909474,12.9413479957927,10.6003928860989,16.9706338597328,48.4618579167118,10.8328894894272,7.95897485891129,16.860165643767,21.2072770375479,22.1964010467561,19.0605340609597,12.8819949888148,8.6925114535539,7.53926112677186,13.0368240144207,14.5757810678288,12.8828587626927,10.8701646255398,21.9973025916683,23.5129174453076,51.5554427204696,9.46988351489133,8.58794923553845,7.35686734187113,10.803727788321,11.3028613376786,12.3826428455417,8.96796041993949,9.46387418053261,9.05461797586555,9.7005596819779,9.64441008855878,10.7330185740009,12.4941567483718,11.9560317167007,16.716103993064,13.9931852757402,11.5439874754726,25.2796747432765,25.4774428043568,24.1538974486254,15.9486844852336,12.8989332989603,16.0255234700303,22.7274946161802,16.3314312350345,13.1127045954272,16.7424440220294,16.3646774853768,14.7124331382634,8.55711219550098,12.148392341853,11.5928397650574,11.4035990191759,14.7098577245004,15.2995317386824,9.04246778825747,11.7311258112384,10.2429822724977,13.7514294665043,6.39864751605702,7.89604684325491,24.3559501898756,53.4461340251858,80.5008518718431,85.6015317506516,20.404749646414,118.912645310736,58.0584332328623,67.4462440219501,66.48275370762,18.8752075817387,20.3169766882213,26.6849306160852,11.7594098590911,9.93962059704641,29.3040112750009,22.1979947351393,20.9468686141036,25.5995742599663,29.9108820597737,26.4222164883488,33.2837303023715,37.5127378322274,13.933273473096,8.67594549723689,9.04171377520734,8.54476027062444,10.1430060694251,10.8529721888588,14.0044218479781,12.6586300478357,10.8630601939274,11.2570179407113,20.1275489138296,16.0020607497456,11.8574315783533,12.1237861414614,10.5844473977928,11.5786445127208,14.5955020231618,10.0430448238357,11.7334783038259,12.0519010900384,12.2038929110021,18.4256883185997,18.5674039891091,13.4642217021881,14.817703545982,15.5025282754142,15.7860220970912,15.8947415274266,14.850908440467,15.4774492682217,40.7136466636035,33.1782467129413,33.4399705652945,23.1786866895975,13.1651483789989,12.8932855251423,11.3115112309906,9.59389523376617,9.4652465824877,14.055794794679,9.26320610251035,14.8160654730582,14.704712489438,13.0215204162863,14.1683745586213,14.9050487534769,14.6256477840214,9.63963949265421,22.9942938037395,18.16269157406,17.4289046508326,24.4155781999352,26.5490276679926,17.7229864393136,21.7672961014621,27.1591314848493,30.4160949667196,18.1386737286917,28.1686839553361,18.1766864738753,20.6768479463138,18.6461687182131,33.7339547439996,19.5957532171555,20.7668159509811,10.2634823597847,10.6074120701859,14.1462443120851,18.0887038315119,16.2315624017884,20.7331765958672,24.3571959291679,17.835049812842,31.1393144169816,73.4359565523023,11.5420377059036,16.6308359496783,9.71038091343309,10.9822556482886,8.69946768648825,25.0673519501672,14.2777482548092,11.1066072518604,14.0343070214991,15.0007567169466,7.72310673719233,7.79157098009843,8.00723606222829,14.4481665494777,18.1936888020755,19.2097963588149,21.0027535963325,9.80641580101519,16.4688768372747,18.468913280528,18.3997700492732,25.5484199583028,12.6772485601731,17.4398791580459,22.2492550686425,35.7737326285348,9.32008969630389,1.12738587736838,14.8021380583539,12.0784698033681,15.3616438791798,15.37001899385,17.4024809255502,19.5986588538409,12.8902340995511,9.33248165388827,3.8653459332161,3.45636007509439,16.4325782726653,13.1771389938607,12.9415806027682,13.5117655896907,15.0382424360684,17.6826405755326,12.8609130986367,14.6212631902831,13.024672043311,15.317568137655,14.518970659705,13.3517296613461,15.9711657122947,21.0378423926824,7.48210265930198,13.0971712490698,5.11368982674011,10.9125000636651,17.0006842748328,45.2314765837349,28.2053501371588,12.862102744744,72.2263829810923,16.942555278512,14.2700823317225,13.7494923225455,11.8578695817144,11.6464028361009,12.8416962556249,18.2256075062588,10.8077088773813,9.5159905886683,12.9440077937955,2.69847103718859,8.37952234142165,11.0976843740187,10.6966955510049,5.03071590307158,6.80220981265052,15.3350242183115,17.512979865306,18.2923949467335,19.2049880940486,17.4900716924265,14.9014809695,14.0462261204824,15.173961119954,13.5547706735247,14.2888107384922,17.1508802398386,11.1887347868949,11.9504911232959,14.1310963329021,15.0862471049583,15.4403951358624,12.3986818772607,15.2613737463945,14.3987352035456,13.8767956942349,12.9878860739669,10.2597187460759,14.9384525230448,19.6399795080208,13.64302708428,14.2831499444567,13.5046244245997,12.3949472948773,19.4835677090953,20.2346568129736,21.0538447600868,21.7019764588781,15.4943548975763,13.8972594045295,12.2889952878823
|short_description=p1@Tmppe,p2@Glb1
|short_description=p1@Tmppe,p2@Glb1
}}
}}

Revision as of 02:37, 20 April 2012

Short description:p1@Tmppe, p2@Glb1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tmppe_5end, CAGE_peak_2_at_Glb1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000111820, ENSMUST00000166248, NM_001200002, NM_009752, uc009rxh.2, uc009rxi.2, uc009rxj.2, uc009rxk.2, uc009rxl.2, uc009rxm.2, uc009rxn.2, uc012hcb.1_5end
EntrezGene:100504715,12091
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tmppep2@Glb1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.53
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I510.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I315.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.28
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.59
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.05
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E64.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.07
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A38.50
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.72
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A617.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H217.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D124.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D229.36
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I119.38
GP2+ M cell, pool3.CNhs13240.11847-124I221.55
Ileum epithelium, pool1.CNhs13199.10252-104B937.81
Ileum epithelium, pool2.CNhs13232.10253-104C132.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F620.11
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F718.38
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H313.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H28.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H412.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.28
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B324.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B733.64
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C225.73
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B827.68
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C327.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C446.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.90
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I922.49
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.80
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C122.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.65
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C39.71
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D124.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C771.09
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E794.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D285.97
Mouse Microglia, donor1.CNhs12629.11718-123C842.54
Mouse Microglia, donor2.CNhs12634.11736-123E833.04
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.47
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.43
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D318.72
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.21
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.90
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.24
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.30
Mouse Schwann, donor1.CNhs12507.11728-123D96.82
Mouse Schwann, donor2.CNhs12573.11746-123F913.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.50
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E327.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G612.25
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.41
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G223.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B614.73
accessory axillary lymph node, adult.CNhs10475.1063-29H918.90
adrenal gland, adult.CNhs10508.49-24D719.74
adrenal gland, embryo E14.CNhs11038.406-44C512.32
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I120.29
adrenal gland, embryo E18.CNhs11026.1262-18F519.29
adrenal gland, neonate N00.CNhs11191.1311-23C122.69
adrenal gland, neonate N25.CNhs11223.1377-27I318.60
amnion, adult pregnant day17.5.CNhs10488.583-22A867.98
aorta, adult.CNhs10498.46-23H112.00
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F512.94
bone (os femoris), neonate N16.CNhs11225.1525-43A610.60
bone (os femoris), neonate N20.CNhs11195.1350-25C316.97
cecum, adult.CNhs10467.37-13H448.46
cerebellum, adult.CNhs10494.15-8B210.83
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H716.86
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.21
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.06
corpora quadrigemina, adult.CNhs10501.16-22A412.88
corpus striatum, adult.CNhs10487.19-21D88.69
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B210.87
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.51
epididymis, adult.CNhs10490.58-23B251.56
eyeball, adult.CNhs10484.31-12G49.47
eyeball, embryo E12.CNhs11016.345-16C68.59
eyeball, embryo E14.CNhs10521.399-16E27.36
eyeball, embryo E15.CNhs10593.426-16C910.80
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C612.38
eyeball, neonate N01.CNhs11140.1532-43E78.97
eyeball, neonate N02.CNhs11205.1551-44G89.46
eyeball, neonate N16.CNhs11188.777-19A29.05
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H29.64
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A812.49
forelimb, embryo E15.CNhs11007.437-20E711.96
forelimb, embryo E17.CNhs10598.1517-43C416.72
forelimb, embryo E18.CNhs11008.1520-43B513.99
gonad, embryo E13.CNhs11044.1564-45I611.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D524.15
heart, embryo E11.CNhs10586.331-24E915.95
heart, embryo E12.CNhs11015.353-12F512.90
heart, embryo E13.CNhs11013.376-3I916.03
heart, embryo E14.CNhs10597.403-26D422.73
heart, embryo E15.CNhs11017.431-16C816.33
heart, embryo E16.CNhs11021.457-17C613.11
heart, embryo E17.CNhs11025.479-18E516.74
heart, embryo E18.CNhs11030.1283-20G316.36
heart, neonate N00.CNhs11213.639-21E314.71
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G112.15
heart, neonate N16.CNhs11209.782-15G111.59
heart, neonate N20.CNhs11127.821-26I611.40
heart, neonate N25.CNhs11196.1351-25D314.71
heart, neonate N30.CNhs11202.1390-42D215.30
hippocampus, adult.CNhs10478.13-16E89.04
hippocampus, neonate N00.CNhs11228.627-43G111.73
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A313.75
intestine, embryo E12.CNhs11019.1251-16I56.40
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D824.36
intestine, embryo E16.CNhs10585.463-22H453.45
intestine, embryo E17.CNhs10582.482-18D380.50
intestine, embryo E18.CNhs10526.1289-20F785.60
intestine, neonate N00.CNhs11126.644-26D120.40
intestine, neonate N01.CNhs11192.1322-23E9118.91
intestine, neonate N06.CNhs11102.688-20B858.06
intestine, neonate N07.CNhs11095.720-20F267.45
intestine, neonate N10.CNhs11098.755-23A566.48
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E320.32
intestine, neonate N30.CNhs11131.1384-42G126.68
kidney, embryo E14.CNhs10606.411-4I911.76
kidney, embryo E15.CNhs10997.434-16F89.94
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I222.20
kidney, embryo E18.CNhs11001.1288-20C720.95
kidney, neonate N00.CNhs11214.646-21G725.60
kidney, neonate N10.CNhs11206.758-6D529.91
kidney, neonate N20.CNhs11113.832-19I126.42
kidney, neonate N25.CNhs11122.1353-25F333.28
kidney, neonate N30.CNhs11203.1385-42H137.51
liver, adult pregnant day01.CNhs10466.508-5B213.93
liver, embryo E12.CNhs10601.355-15F88.68
liver, embryo E13.CNhs10524.378-3H69.04
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F510.85
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G412.66
liver, neonate N00.CNhs11117.641-24F410.86
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H216.00
liver, neonate N10.CNhs11115.751-24B911.86
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H110.58
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B114.60
lung, embryo E12.CNhs10522.354-16G210.04
lung, embryo E14.CNhs10604.404-26F811.73
lung, embryo E15.CNhs11020.432-17C512.05
lung, embryo E16.CNhs10998.458-17B612.20
lung, embryo E17.CNhs10605.480-44A618.43
lung, embryo E18.CNhs10583.1287-20I618.57
lung, neonate N00.CNhs11224.640-42C613.46
lung, neonate N06.CNhs11212.683-20E514.82
lung, neonate N07.CNhs11111.715-19A315.50
lung, neonate N10.CNhs11219.750-23E615.79
lung, neonate N20.CNhs11109.822-18A415.89
lung, neonate N25.CNhs11119.1359-25C714.85
lung, neonate N30.CNhs11133.1394-42H215.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A140.71
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A133.18
mammary gland, adult lactating day02.CNhs10480.595-22B633.44
mammary gland, adult pregnant day19.CNhs10476.588-5H223.18
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A312.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C29.59
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.26
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.82
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.02
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.17
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D514.91
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D614.63
olfactory brain, adult.CNhs10489.18-22I99.64
ovary, adult.CNhs10507.91-2I722.99
ovary, embryo E18.CNhs11040.505-44H718.16
ovary, neonate N00.CNhs11217.1299-22I417.43
oviduct, adult pregnant day01.CNhs10500.988-6G624.42
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F417.72
pancreas, embryo E15.CNhs11042.1556-45F221.77
pancreas, embryo E16.CNhs11003.460-26E527.16
pancreas, embryo E17.CNhs10599.1558-45G330.42
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G928.17
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D820.68
pancreas, neonate N16.CNhs11136.787-43B618.65
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H519.60
pituitary gland, adult.CNhs10493.21-1G820.77
pituitary gland, embryo E12.CNhs11018.346-16E610.26
pituitary gland, embryo E13.CNhs11009.370-44C710.61
pituitary gland, embryo E14.CNhs11037.398-44A514.15
pituitary gland, embryo E15.CNhs10592.427-16B918.09
pituitary gland, embryo E16.CNhs11036.449-43F616.23
pituitary gland, embryo E17.CNhs11039.1265-44F520.73
pituitary gland, neonate N00.CNhs11190.1308-22E924.36
placenta, adult pregnant day10.CNhs10472.539-13I717.84
placenta, adult pregnant day17.CNhs10464.577-18G331.14
prostate, adult.CNhs10470.859-1F873.44
skin, adult.CNhs10492.30-1C311.54
skin, neonate N00.CNhs11124.650-25G416.63
skin, neonate N03.CNhs11215.662-22H39.71
skin, neonate N06.CNhs11097.693-20I510.98
skin, neonate N10.CNhs11108.762-6C48.70
small intestine, neonate N16.CNhs11114.790-21I125.07
spinal cord, adult.CNhs10505.24-13C914.28
spleen, adult.CNhs10465.25-2G211.11
spleen, embryo E16.CNhs11035.461-43C114.03
spleen, embryo E18.CNhs11011.1271-21F215.00
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H17.79
spleen, neonate N25.CNhs11099.1354-25G38.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.21
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E39.81
stomach, embryo E15.CNhs10603.1252-16G816.47
stomach, embryo E16.CNhs11022.459-17D418.47
stomach, embryo E17.CNhs11006.1035-18D518.40
stomach, embryo E18.CNhs10999.1286-20C625.55
stomach, neonate N03.CNhs11193.1340-24B812.68
stomach, neonate N07.CNhs11210.718-18A917.44
stomach, neonate N25.CNhs11104.1355-25E422.25
stomach, neonate N30.CNhs11134.1386-42I135.77
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F514.80
testis, embryo E15.CNhs11034.443-27C512.08
testis, embryo E16.CNhs11033.470-26G515.36
testis, embryo E17.CNhs11029.486-18I515.37
testis, embryo E18.CNhs11027.503-18G517.40
testis, neonate N00.CNhs11189.1300-22B719.60
testis, neonate N07.CNhs11222.726-26I412.89
testis, neonate N10.CNhs11204.763-44D99.33
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B516.43
thymus, embryo E14.CNhs11041.402-44I413.18
thymus, embryo E15.CNhs11005.430-45I212.94
thymus, embryo E16.CNhs11002.456-26C513.51
thymus, embryo E17.CNhs10581.478-18C115.04
thymus, embryo E18.CNhs10595.1273-19G417.68
thymus, neonate N02.CNhs11181.1541-43F812.86
thymus, neonate N03.CNhs11137.2104-43C714.62
thymus, neonate N06.CNhs11197.681-26C413.02
thymus, neonate N07.CNhs11211.713-19D315.32
thymus, neonate N10.CNhs11194.748-24E414.52
thymus, neonate N20.CNhs11186.820-7A213.35
thymus, neonate N25.CNhs11125.1362-25G715.97
thymus, neonate N30.CNhs11132.1393-42G221.04
tongue, adult.CNhs10499.32-1B47.48
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.91
urinary bladder, adult.CNhs10481.879-12E417.00
uterus, adult pregnant day19.CNhs10497.590-15F545.23
uterus, adult.CNhs10509.92-27E528.21
vagina, adult.CNhs10502.89-27D512.86
vesicular gland, adult.CNhs10491.51-27F872.23
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A116.94
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.75
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.81
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H211.10
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G517.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G518.29
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.49
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G514.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G515.17
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G514.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.99
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.94
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.64
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.39
whole body, embryo E17.5.CNhs10513.490-9F919.48
whole body, embryo E17.CNhs10517.475-3I520.23
whole body, embryo E18.CNhs10516.493-3B321.05
whole body, neonate N00.CNhs10525.657-19C221.70
whole body, neonate N01.CNhs10576.659-23C615.49
whole body, neonate N06.CNhs10515.692-21D113.90
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:114310210..114310251,%2B&oldid=1155366"