Personal tools

FFCP PHASE1:Mm9::chr6:118369406..118369459,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001048!5.23e-15!147;UBERON:0004177!1.16e-12!29;UBERON:0002370!2.90e-11!23;UBERON:0000974!2.90e-11!23;UBERON:0004807!2.90e-11!23;UBERON:0005058!2.90e-11!23;UBERON:0003351!2.90e-11!23;UBERON:0009113!2.90e-11!23;UBERON:0003295!2.90e-11!23;UBERON:0009722!2.90e-11!23;UBERON:0005562!2.90e-11!23;UBERON:0007690!2.90e-11!23;UBERON:0005057!8.25e-11!51;UBERON:0006562!1.96e-10!24;UBERON:0001557!1.96e-10!24;UBERON:0001042!1.96e-10!24;UBERON:0008814!1.96e-10!24;UBERON:0009145!1.96e-10!24;UBERON:0003408!4.16e-10!24;UBERON:0000065!4.64e-10!41;UBERON:0001041!2.31e-09!92;UBERON:0001004!2.63e-09!42;UBERON:0000072!1.50e-08!27;UBERON:0000926!1.54e-08!193;UBERON:0004120!1.54e-08!193;UBERON:0006603!1.54e-08!193;UBERON:0002390!1.68e-08!45;UBERON:0003061!1.68e-08!45;UBERON:0000077!3.62e-08!97;UBERON:0002405!8.26e-08!70;UBERON:0002193!1.25e-07!48
|phase1_expression=28.8267924788629,9.07336059862339,5.45999087267443,13.3084252975005,8.5152274090879,20.1455126294268,20.5579123724063,33.1846941244851,55.329967805605,64.3677447385482,75.3359060192222,80.6496527442851,42.8001824828014,41.9617931611187,47.9678057014554,34.6232707236602,28.682037003254,47.792518051773,49.9096538324889,37.3462893582267,34.7827056717875,33.2624686522966,33.9559725880616,16.3192271249275,13.3057383018959,9.76194338995534,13.3536218809313,9.69620547086501,12.1614988452079,16.3819584343955,11.9734475753865,36.196748387199,44.8997294936736,47.5445043046316,22.5304263405994,16.1247605997738,20.6211049824993,18.8339233831608,25.0027310247616,18.8468547830567,20.5881020810855,18.442228093878,17.9638830621527,25.6829508670178,24.8373481487811,38.5448179539531,16.4302182313088,8.72100625521786,5.05278220289285,12.0546537426056,13.7186693192855,11.5002051491977,33.8920864236627,42.7963663786693,50.7501636705121,23.6678681153071,28.3668105539369,22.17389996793,16.9945827122062,20.6306481916093,18.3811107016792,10.8430250262122,16.8966011261116,8.99899717281399,10.8775299882367,10.6572017241915,6.89080254192331,7.30014780110954,22.0858874217057,21.7359560714022,23.9770455940576,15.7108041422092,17.0068776532742,22.1708346579067,23.3862949284497,21.1420320920305,15.4162233399144,23.8775322219301,25.1914714540239,18.3321939944969,19.1209175129036,18.2319679694866,16.1926139420801,26.449842671489,20.6277634498694,22.3917724959987,26.4811326286331,21.8087351615602,41.6494063332512,31.1354827639956,34.4938741554997,21.5105969245347,29.2387673494333,28.0645659651665,32.4888208723835,34.4980703064948,25.2799956237153,25.9054090318648,25.4590284510811,20.1403557470894,22.5349471642689,35.931413676009,68.7974147207943,49.7746692207332,24.4634876342672,26.8561457403604,27.8038444758131,27.1757633731363,75.6098620249741,23.4538579722423,27.4106816290495,25.5751001782199,18.6798552777407,22.9098413639986,29.5147654910619,20.2323212040778,53.6413079983591,30.2212655962615,33.6152009740952,31.22100203985,36.6596920644253,35.3958934788712,35.4144346314432,35.7192572354088,35.3964934514739,20.6920214718959,33.068974363634,26.3957201637099,28.4637308643665,26.213361895844,24.7050325522058,27.1413400563787,28.3333641913411,35.5444485689159,22.648896856992,24.9851545124347,31.0610059743465,28.2403823284911,21.2287117084287,31.5662783829711,37.4746875732587,27.1284483231498,31.5108727159361,34.8128129200502,39.7333155043755,39.7152532883034,31.9522880748675,31.3031078594209,46.3471184805611,44.6290349196053,42.7561231718396,30.9065982722881,36.7022368977789,34.8252166522167,37.4523488262457,42.792367365976,26.6841011179029,34.4846195533718,31.5421484329108,27.7548535197573,33.3027005173157,28.8099298337624,30.3033261549069,29.5146347621106,28.0766145455028,29.7643449280522,28.7052539497593,25.4548446360429,23.0383789878873,25.774291860418,30.4008035796959,28.9475975102158,28.3219648725455,26.8412837520744,28.8097229532854,24.9029161957868,17.8426142811251,21.4204958997471,47.7765681198924,46.6795710439481,38.660238396628,28.0340099226446,26.2406091736947,23.3977520118448,20.8792787079585,19.9285735216053,23.3741744184251,23.8747766449381,22.8107981929371,28.7622210769351,19.0201483889731,20.1132685986911,21.0531370057921,40.1012279260148,39.4477074855781,38.6937522906097,31.4203029211554,35.2081815849399,31.2388493393831,27.6030976721856,26.6897837330337,24.0624469647511,26.6807364378434,50.5540670319765,52.6778106903384,42.4989392407374,37.93484269965,32.3177394068239,26.9903402888305,26.7557407829254,27.8872590053061,26.907018492432,51.7565543498476,27.5384301274693,35.2602570619453,39.6548838376965,33.5473163285976,26.5343936749852,30.4842763774898,40.5511621188837,44.163508615789,41.2480558433707,38.4892007193143,34.506289033014,33.3261097240419,39.2218632194176,35.1526371356806,31.447985930126,32.6882275747849,31.6256197401374,30.5652417902635,31.9674419465141,30.1582567878545,34.2660580805787,30.4893849271802,30.0771053472158,24.72479085812,20.5120451536356,36.7214277643753,36.6082844446341,29.9732808445444,31.6255382880277,32.3135096599198,40.8636644498864,30.9690156974528,35.6676428793929,53.8398233227609,27.179794785752,30.4371589018823,30.2042037436499,33.2139799387349,30.2711526234334,28.1794439681687,31.6742636107268,42.4784442687881,35.2031922424723,35.0695326079111,32.0628635585027,28.644283609435,31.9732553861685,32.0451083528594,32.7180356529755,32.7977588113944,33.4998963411965,31.6255825724996,20.6271086496374,24.8520912200265,43.3947236615458,25.0955846538544,31.0788700795809,31.743901821967,27.4687979107189,27.3151374199521,17.3545020995322,31.6806805886009,26.6908409288413,23.376010193826,47.9818996059707,35.3607094464033,37.152761755744,32.4692775688531,40.5428022370301,25.0673519501672,24.4761398653873,36.2246267291448,30.3388695905937,44.6318810961005,36.5434806589101,46.3393431974275,40.4937366575545,31.7859664088509,36.1074746995038,28.7455945513201,12.4107180341965,36.6949752554117,38.4273792869744,33.4816556547584,28.2269199619533,26.8585953407798,29.9398848974302,25.8705316420301,26.175594198403,19.9607058869361,19.8828580187816,105.974272472628,43.9578645369298,38.7172867669608,47.4460899559476,37.0688693381088,36.3255669805173,41.1923907646596,39.9727461470927,55.1560151679239,90.5940453097523,80.0723417396866,42.9775124054322,31.4224083699755,38.3111870224806,38.4565636014273,39.9229531338484,41.7230845040656,43.6309481757487,43.4207209893257,48.4638959751109,44.2761546665549,42.346997757473,47.0721563973004,43.6801761047096,43.8288383180884,25.3938029649037,61.71209503799,81.8190372278418,57.5844234128789,21.2508553435409,25.7124991368119,33.883050489444,26.152942247646,20.5644562654499,28.8023439734704,22.5559365888517,35.5195218332426,26.4653900809279,33.5690434687615,29.4603619981983,31.0510350106631,29.7211994127986,34.8919654917838,30.5478583933574,55.0072942196136,33.1190644922856,33.4637867278103,32.3331933700831,38.3592087609208,30.1503353858023,27.3363475195987,31.5233637575508,30.4873249112224,25.017023964616,24.8409713892435,30.9347199873165,31.4635465098805,29.4515701062399,32.0489916772322,33.8168520810982,32.5634955905044,32.9874766992936,34.6152156674778,30.9117732282234,34.9726637433124,39.3996289673729,32.1888856428883,30.2320546595243,30.2091111133211,29.6151127620868,29.2684756596436,33.6729230640439,32.5929873230068,33.1073940278066,30.1332946035402,31.2259209130536,31.5107903240661,29.4379998253335,32.2154040338506,24.7312472158566,32.7504251823572,28.5778501884237,31.9451514554968,24.9268303605053,28.7516116169323
|phase1_expression=28.8267924788629,9.07336059862339,5.45999087267443,13.3084252975005,8.5152274090879,20.1455126294268,20.5579123724063,33.1846941244851,55.329967805605,64.3677447385482,75.3359060192222,80.6496527442851,42.8001824828014,41.9617931611187,47.9678057014554,34.6232707236602,28.682037003254,47.792518051773,49.9096538324889,37.3462893582267,34.7827056717875,33.2624686522966,33.9559725880616,16.3192271249275,13.3057383018959,9.76194338995534,13.3536218809313,9.69620547086501,12.1614988452079,16.3819584343955,11.9734475753865,36.196748387199,44.8997294936736,47.5445043046316,22.5304263405994,16.1247605997738,20.6211049824993,18.8339233831608,25.0027310247616,18.8468547830567,20.5881020810855,18.442228093878,17.9638830621527,25.6829508670178,24.8373481487811,38.5448179539531,16.4302182313088,8.72100625521786,5.05278220289285,12.0546537426056,13.7186693192855,11.5002051491977,33.8920864236627,42.7963663786693,50.7501636705121,23.6678681153071,28.3668105539369,22.17389996793,16.9945827122062,20.6306481916093,18.3811107016792,10.8430250262122,16.8966011261116,8.99899717281399,10.8775299882367,10.6572017241915,6.89080254192331,7.30014780110954,22.0858874217057,21.7359560714022,23.9770455940576,15.7108041422092,17.0068776532742,22.1708346579067,23.3862949284497,21.1420320920305,15.4162233399144,23.8775322219301,25.1914714540239,18.3321939944969,19.1209175129036,18.2319679694866,16.1926139420801,26.449842671489,20.6277634498694,22.3917724959987,26.4811326286331,21.8087351615602,41.6494063332512,31.1354827639956,34.4938741554997,21.5105969245347,29.2387673494333,28.0645659651665,32.4888208723835,34.4980703064948,25.2799956237153,25.9054090318648,25.4590284510811,20.1403557470894,22.5349471642689,35.931413676009,68.7974147207943,49.7746692207332,24.4634876342672,26.8561457403604,27.8038444758131,27.1757633731363,75.6098620249741,23.4538579722423,27.4106816290495,25.5751001782199,18.6798552777407,22.9098413639986,29.5147654910619,20.2323212040778,53.6413079983591,30.2212655962615,33.6152009740952,31.22100203985,36.6596920644253,35.3958934788712,35.4144346314432,35.7192572354088,35.3964934514739,20.6920214718959,33.068974363634,26.3957201637099,28.4637308643665,26.213361895844,24.7050325522058,27.1413400563787,28.3333641913411,35.5444485689159,22.648896856992,24.9851545124347,31.0610059743465,28.2403823284911,21.2287117084287,31.5662783829711,37.4746875732587,27.1284483231498,31.5108727159361,34.8128129200502,39.7333155043755,39.7152532883034,31.9522880748675,31.3031078594209,46.3471184805611,44.6290349196053,42.7561231718396,30.9065982722881,36.7022368977789,34.8252166522167,37.4523488262457,42.792367365976,26.6841011179029,34.4846195533718,31.5421484329108,27.7548535197573,33.3027005173157,28.8099298337624,30.3033261549069,29.5146347621106,28.0766145455028,29.7643449280522,28.7052539497593,25.4548446360429,23.0383789878873,25.774291860418,30.4008035796959,28.9475975102158,28.3219648725455,26.8412837520744,28.8097229532854,24.9029161957868,17.8426142811251,21.4204958997471,47.7765681198924,46.6795710439481,38.660238396628,28.0340099226446,26.2406091736947,23.3977520118448,20.8792787079585,19.9285735216053,23.3741744184251,23.8747766449381,22.8107981929371,28.7622210769351,19.0201483889731,20.1132685986911,21.0531370057921,40.1012279260148,39.4477074855781,38.6937522906097,31.4203029211554,35.2081815849399,31.2388493393831,27.6030976721856,26.6897837330337,24.0624469647511,26.6807364378434,50.5540670319765,52.6778106903384,42.4989392407374,37.93484269965,32.3177394068239,26.9903402888305,26.7557407829254,27.8872590053061,26.907018492432,51.7565543498476,27.5384301274693,35.2602570619453,39.6548838376965,33.5473163285976,26.5343936749852,30.4842763774898,40.5511621188837,44.163508615789,41.2480558433707,38.4892007193143,34.506289033014,33.3261097240419,39.2218632194176,35.1526371356806,31.447985930126,32.6882275747849,31.6256197401374,30.5652417902635,31.9674419465141,30.1582567878545,34.2660580805787,30.4893849271802,30.0771053472158,24.72479085812,20.5120451536356,36.7214277643753,36.6082844446341,29.9732808445444,31.6255382880277,32.3135096599198,40.8636644498864,30.9690156974528,35.6676428793929,53.8398233227609,27.179794785752,30.4371589018823,30.2042037436499,33.2139799387349,30.2711526234334,28.1794439681687,31.6742636107268,42.4784442687881,35.2031922424723,35.0695326079111,32.0628635585027,28.644283609435,31.9732553861685,32.0451083528594,32.7180356529755,32.7977588113944,33.4998963411965,31.6255825724996,20.6271086496374,24.8520912200265,43.3947236615458,25.0955846538544,31.0788700795809,31.743901821967,27.4687979107189,27.3151374199521,17.3545020995322,31.6806805886009,26.6908409288413,23.376010193826,47.9818996059707,35.3607094464033,37.152761755744,32.4692775688531,40.5428022370301,25.0673519501672,24.4761398653873,36.2246267291448,30.3388695905937,44.6318810961005,36.5434806589101,46.3393431974275,40.4937366575545,31.7859664088509,36.1074746995038,28.7455945513201,12.4107180341965,36.6949752554117,38.4273792869744,33.4816556547584,28.2269199619533,26.8585953407798,29.9398848974302,25.8705316420301,26.175594198403,19.9607058869361,19.8828580187816,105.974272472628,43.9578645369298,38.7172867669608,47.4460899559476,37.0688693381088,36.3255669805173,41.1923907646596,39.9727461470927,55.1560151679239,90.5940453097523,80.0723417396866,42.9775124054322,31.4224083699755,38.3111870224806,38.4565636014273,39.9229531338484,41.7230845040656,43.6309481757487,43.4207209893257,48.4638959751109,44.2761546665549,42.346997757473,47.0721563973004,43.6801761047096,43.8288383180884,25.3938029649037,61.71209503799,81.8190372278418,57.5844234128789,21.2508553435409,25.7124991368119,33.883050489444,26.152942247646,20.5644562654499,28.8023439734704,22.5559365888517,35.5195218332426,26.4653900809279,33.5690434687615,29.4603619981983,31.0510350106631,29.7211994127986,34.8919654917838,30.5478583933574,55.0072942196136,33.1190644922856,33.4637867278103,32.3331933700831,38.3592087609208,30.1503353858023,27.3363475195987,31.5233637575508,30.4873249112224,25.017023964616,24.8409713892435,30.9347199873165,31.4635465098805,29.4515701062399,32.0489916772322,33.8168520810982,32.5634955905044,32.9874766992936,34.6152156674778,30.9117732282234,34.9726637433124,39.3996289673729,32.1888856428883,30.2320546595243,30.2091111133211,29.6151127620868,29.2684756596436,33.6729230640439,32.5929873230068,33.1073940278066,30.1332946035402,31.2259209130536,31.5107903240661,29.4379998253335,32.2154040338506,24.7312472158566,32.7504251823572,28.5778501884237,31.9451514554968,24.9268303605053,28.7516116169323
|short_description=p1@Bms1
|short_description=p1@Bms1
}}
}}

Revision as of 17:12, 19 April 2012

Short description:p1@Bms1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bms1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000032237, NM_194339, uc009dlo.1, uc012erc.1_5end
EntrezGene:Bms1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bms1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.83
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.31
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.56
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E933.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E755.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F264.37
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E675.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F180.65
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E442.80
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E841.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A147.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A334.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A528.68
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A247.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A449.91
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A637.35
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I933.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.31
GP2+ M cell, pool1.CNhs13228.11845-124H99.76
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B912.16
Ileum epithelium, pool2.CNhs13232.10253-104C116.38
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I336.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G644.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.12
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.62
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H318.85
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H218.44
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.68
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.84
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B338.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.72
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.72
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I942.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A150.75
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C123.67
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C316.99
Mouse Granule cells, donor2.CNhs12357.11731-123E320.63
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C610.84
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F521.74
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.01
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.17
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.33
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F419.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.23
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E416.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E526.45
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.63
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F626.48
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.81
Mouse Schwann, donor1.CNhs12507.11728-123D941.65
Mouse Schwann, donor2.CNhs12573.11746-123F931.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G334.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C429.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.06
Mouse hepatocyte, donor6.CNhs13090.11822-124F432.49
Mouse hepatocyte, donor8.CNhs13091.11824-124F634.50
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A725.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I725.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I820.14
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G622.53
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H135.93
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I868.80
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G226.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G327.80
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.18
accessory axillary lymph node, adult.CNhs10475.1063-29H975.61
adrenal gland, adult.CNhs10508.49-24D723.45
adrenal gland, embryo E14.CNhs11038.406-44C527.41
adrenal gland, embryo E16.CNhs11004.1254-43D625.58
adrenal gland, embryo E17.CNhs11043.1263-45I118.68
adrenal gland, embryo E18.CNhs11026.1262-18F522.91
adrenal gland, neonate N00.CNhs11191.1311-23C129.51
adrenal gland, neonate N25.CNhs11223.1377-27I320.23
amnion, adult pregnant day17.5.CNhs10488.583-22A853.64
aorta, adult.CNhs10498.46-23H130.22
bone (os femoris), adult.CNhs10483.56-12G233.62
bone (os femoris), neonate N02.CNhs11227.1985-43F531.22
bone (os femoris), neonate N16.CNhs11225.1525-43A636.66
bone (os femoris), neonate N20.CNhs11195.1350-25C335.40
cecum, adult.CNhs10467.37-13H435.41
cerebellum, adult.CNhs10494.15-8B235.72
cerebellum, neonate N30.CNhs11135.1395-42I235.40
colon, adult.CNhs10468.36-18H720.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C733.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D428.46
corpora quadrigemina, adult.CNhs10501.16-22A426.21
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F127.14
cortex, adult.CNhs10473.12-14D528.33
cortex, neonate N30.CNhs11107.1392-42F235.54
diencephalon, adult.CNhs10482.20-12F222.65
diencephalon, neonate N30.CNhs11201.1388-42B224.99
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A228.24
epididymis, adult.CNhs10490.58-23B221.23
eyeball, adult.CNhs10484.31-12G431.57
eyeball, embryo E12.CNhs11016.345-16C637.47
eyeball, embryo E14.CNhs10521.399-16E227.13
eyeball, embryo E15.CNhs10593.426-16C931.51
eyeball, embryo E17.CNhs11023.1261-18D434.81
eyeball, neonate N00.CNhs11207.633-15C639.73
eyeball, neonate N01.CNhs11140.1532-43E739.72
eyeball, neonate N02.CNhs11205.1551-44G831.95
eyeball, neonate N16.CNhs11188.777-19A231.30
forelimb, embryo E11.CNhs10596.335-25E246.35
forelimb, embryo E12.CNhs10600.359-14H244.63
forelimb, embryo E13.CNhs10589.384-1E242.76
forelimb, embryo E14.CNhs10577.413-26A830.91
forelimb, embryo E15.CNhs11007.437-20E736.70
forelimb, embryo E17.CNhs10598.1517-43C434.83
forelimb, embryo E18.CNhs11008.1520-43B537.45
gonad, embryo E13.CNhs11044.1564-45I642.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C826.68
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D234.48
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D531.54
heart, embryo E11.CNhs10586.331-24E927.75
heart, embryo E12.CNhs11015.353-12F533.30
heart, embryo E13.CNhs11013.376-3I928.81
heart, embryo E14.CNhs10597.403-26D430.30
heart, embryo E15.CNhs11017.431-16C829.51
heart, embryo E16.CNhs11021.457-17C628.08
heart, embryo E17.CNhs11025.479-18E529.76
heart, embryo E18.CNhs11030.1283-20G328.71
heart, neonate N00.CNhs11213.639-21E325.45
heart, neonate N03.CNhs11221.1349-25I223.04
heart, neonate N10.CNhs11118.749-24G125.77
heart, neonate N16.CNhs11209.782-15G130.40
heart, neonate N20.CNhs11127.821-26I628.95
heart, neonate N25.CNhs11196.1351-25D328.32
heart, neonate N30.CNhs11202.1390-42D226.84
hippocampus, adult.CNhs10478.13-16E828.81
hippocampus, neonate N00.CNhs11228.627-43G124.90
intestinal mucosa, adult.CNhs10506.860-29I317.84
intestine, adult.CNhs10496.178-9A321.42
intestine, embryo E12.CNhs11019.1251-16I547.78
intestine, embryo E13.CNhs11010.381-16D546.68
intestine, embryo E15.CNhs10602.976-16D838.66
intestine, embryo E16.CNhs10585.463-22H428.03
intestine, embryo E17.CNhs10582.482-18D326.24
intestine, embryo E18.CNhs10526.1289-20F723.40
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E919.93
intestine, neonate N06.CNhs11102.688-20B823.37
intestine, neonate N07.CNhs11095.720-20F223.87
intestine, neonate N10.CNhs11098.755-23A522.81
intestine, neonate N20.CNhs11187.827-18D128.76
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G120.11
kidney, embryo E14.CNhs10606.411-4I921.05
kidney, embryo E15.CNhs10997.434-16F840.10
kidney, embryo E16.CNhs10584.464-22A539.45
kidney, embryo E17.CNhs11028.483-18I238.69
kidney, embryo E18.CNhs11001.1288-20C731.42
kidney, neonate N00.CNhs11214.646-21G735.21
kidney, neonate N10.CNhs11206.758-6D531.24
kidney, neonate N20.CNhs11113.832-19I127.60
kidney, neonate N25.CNhs11122.1353-25F326.69
kidney, neonate N30.CNhs11203.1385-42H124.06
liver, adult pregnant day01.CNhs10466.508-5B226.68
liver, embryo E12.CNhs10601.355-15F850.55
liver, embryo E13.CNhs10524.378-3H652.68
liver, embryo E14.CNhs10594.409-16E142.50
liver, embryo E15.CNhs10520.433-16D737.93
liver, embryo E16.CNhs10523.462-17F532.32
liver, embryo E17.CNhs10510.481-18A326.99
liver, embryo E18.CNhs10579.499-43G426.76
liver, neonate N00.CNhs11117.641-24F427.89
liver, neonate N03.CNhs11123.1345-25G226.91
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H227.54
liver, neonate N10.CNhs11115.751-24B935.26
liver, neonate N20.CNhs11220.823-25A339.65
liver, neonate N25.CNhs11198.1368-26H133.55
liver, neonate N30.CNhs11106.1382-42D126.53
lung, adult.CNhs10474.28-22B130.48
lung, embryo E12.CNhs10522.354-16G240.55
lung, embryo E14.CNhs10604.404-26F844.16
lung, embryo E15.CNhs11020.432-17C541.25
lung, embryo E16.CNhs10998.458-17B638.49
lung, embryo E17.CNhs10605.480-44A634.51
lung, embryo E18.CNhs10583.1287-20I633.33
lung, neonate N00.CNhs11224.640-42C639.22
lung, neonate N06.CNhs11212.683-20E535.15
lung, neonate N07.CNhs11111.715-19A331.45
lung, neonate N10.CNhs11219.750-23E632.69
lung, neonate N20.CNhs11109.822-18A431.63
lung, neonate N25.CNhs11119.1359-25C730.57
lung, neonate N30.CNhs11133.1394-42H231.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A134.27
mammary gland, adult lactating day02.CNhs10480.595-22B630.49
mammary gland, adult pregnant day19.CNhs10476.588-5H230.08
medulla oblongata, adult.CNhs10477.17-12C224.72
medulla oblongata, neonate N30.CNhs11200.1396-42A320.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C736.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C236.61
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.97
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E231.63
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E332.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D740.86
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D935.67
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D453.84
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D527.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.44
olfactory brain, adult.CNhs10489.18-22I930.20
ovary, adult.CNhs10507.91-2I733.21
ovary, embryo E18.CNhs11040.505-44H730.27
ovary, neonate N00.CNhs11217.1299-22I428.18
oviduct, adult pregnant day01.CNhs10500.988-6G631.67
pancreas, adult.CNhs10486.34-16E442.48
pancreas, embryo E14.CNhs11012.405-44F435.20
pancreas, embryo E15.CNhs11042.1556-45F235.07
pancreas, embryo E16.CNhs11003.460-26E532.06
pancreas, embryo E17.CNhs10599.1558-45G328.64
pancreas, embryo E18.CNhs10580.1535-43I731.97
pancreas, neonate N00.CNhs11105.645-26G932.05
pancreas, neonate N01.CNhs11138.1531-43D732.72
pancreas, neonate N02.CNhs11139.1539-43D832.80
pancreas, neonate N16.CNhs11136.787-43B633.50
pancreas, neonate N25.CNhs11094.1555-45E231.63
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G824.85
pituitary gland, embryo E12.CNhs11018.346-16E643.39
pituitary gland, embryo E13.CNhs11009.370-44C725.10
pituitary gland, embryo E14.CNhs11037.398-44A531.08
pituitary gland, embryo E15.CNhs10592.427-16B931.74
pituitary gland, embryo E16.CNhs11036.449-43F627.47
pituitary gland, embryo E17.CNhs11039.1265-44F527.32
pituitary gland, neonate N00.CNhs11190.1308-22E917.35
placenta, adult pregnant day10.CNhs10472.539-13I731.68
placenta, adult pregnant day17.CNhs10464.577-18G326.69
prostate, adult.CNhs10470.859-1F823.38
skin, adult.CNhs10492.30-1C347.98
skin, neonate N00.CNhs11124.650-25G435.36
skin, neonate N03.CNhs11215.662-22H337.15
skin, neonate N06.CNhs11097.693-20I532.47
skin, neonate N10.CNhs11108.762-6C440.54
small intestine, neonate N16.CNhs11114.790-21I125.07
spinal cord, adult.CNhs10505.24-13C924.48
spleen, adult.CNhs10465.25-2G236.22
spleen, embryo E16.CNhs11035.461-43C130.34
spleen, embryo E18.CNhs11011.1271-21F244.63
spleen, neonate N10.CNhs11116.752-24D136.54
spleen, neonate N20.CNhs11112.824-19H146.34
spleen, neonate N25.CNhs11099.1354-25G340.49
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C631.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C936.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D328.75
stomach, adult.CNhs10503.33-1H612.41
stomach, embryo E12.CNhs10588.356-43E336.69
stomach, embryo E15.CNhs10603.1252-16G838.43
stomach, embryo E16.CNhs11022.459-17D433.48
stomach, embryo E17.CNhs11006.1035-18D528.23
stomach, embryo E18.CNhs10999.1286-20C626.86
stomach, neonate N03.CNhs11193.1340-24B829.94
stomach, neonate N07.CNhs11210.718-18A925.87
stomach, neonate N25.CNhs11104.1355-25E426.18
stomach, neonate N30.CNhs11134.1386-42I119.96
submandibular gland, adult.CNhs10469.59-29C119.88
testis, adult.CNhs10504.57-7G5105.97
testis, embryo E13.CNhs11031.389-23F543.96
testis, embryo E15.CNhs11034.443-27C538.72
testis, embryo E16.CNhs11033.470-26G547.45
testis, embryo E17.CNhs11029.486-18I537.07
testis, embryo E18.CNhs11027.503-18G536.33
testis, neonate N00.CNhs11189.1300-22B741.19
testis, neonate N07.CNhs11222.726-26I439.97
testis, neonate N10.CNhs11204.763-44D955.16
testis, neonate N20.CNhs11110.839-18H390.59
testis, neonate N30.CNhs11130.1391-42E280.07
thymus, adult.CNhs10471.38-12B542.98
thymus, embryo E14.CNhs11041.402-44I431.42
thymus, embryo E15.CNhs11005.430-45I238.31
thymus, embryo E16.CNhs11002.456-26C538.46
thymus, embryo E17.CNhs10581.478-18C139.92
thymus, embryo E18.CNhs10595.1273-19G441.72
thymus, neonate N02.CNhs11181.1541-43F843.63
thymus, neonate N03.CNhs11137.2104-43C743.42
thymus, neonate N06.CNhs11197.681-26C448.46
thymus, neonate N07.CNhs11211.713-19D344.28
thymus, neonate N10.CNhs11194.748-24E442.35
thymus, neonate N20.CNhs11186.820-7A247.07
thymus, neonate N25.CNhs11125.1362-25G743.68
thymus, neonate N30.CNhs11132.1393-42G243.83
tongue, adult.CNhs10499.32-1B425.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H361.71
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F781.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G557.58
urinary bladder, adult.CNhs10481.879-12E421.25
uterus, adult pregnant day19.CNhs10497.590-15F525.71
uterus, adult.CNhs10509.92-27E533.88
vagina, adult.CNhs10502.89-27D526.15
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A222.56
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A335.52
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A433.57
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A529.46
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.72
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A834.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A930.55
whole body, embryo E11.CNhs11014.324-5I855.01
whole body, embryo E12.CNhs10587.857-27C933.12
whole body, embryo E13.CNhs10512.372-23H233.46
whole body, embryo E14.5.CNhs10578.420-27D232.33
whole body, embryo E14.CNhs10519.395-14B138.36
whole body, embryo E16.CNhs10514.453-14F230.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G527.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G531.52
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G524.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.93
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G532.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G533.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.56
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G532.99
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.62
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G539.40
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.23
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.59
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G533.11
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.51
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G529.44
whole body, embryo E17.5.CNhs10513.490-9F932.22
whole body, embryo E17.CNhs10517.475-3I524.73
whole body, embryo E18.CNhs10516.493-3B332.75
whole body, neonate N00.CNhs10525.657-19C228.58
whole body, neonate N01.CNhs10576.659-23C631.95
whole body, neonate N06.CNhs10515.692-21D124.93
whole body, neonate N10.CNhs10518.761-6B428.75





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:118369406..118369459,-&oldid=1096104"