Personal tools

FFCP PHASE1:Mm9::chr3:54916002..54916093,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000468!2.04e-07!333
|phase1_expression=29.1470901730725,20.9385244583617,16.3799726180233,40.8326685264221,37.567179745976,8.56184286750638,9.81173090501208,9.68424925811822,3.801295498095,2.80877431586392,9.07455231595176,11.0085579413564,7.70403284690426,8.13009742496676,6.32908547449759,6.68168382386426,8.39474253753776,8.04428521663506,6.85572168028694,5.51706547337439,14.7124891961351,9.03547655928056,11.7539905112521,15.359272588167,9.1763712426868,13.2073351746455,13.3536218809313,11.2045040996662,10.2612646506442,12.3494763582366,7.09537634096975,8.25539875497521,6.76571266343027,0,8.66554859253824,6.15068187826422,9.39179038806898,3.34825304589526,3.1253413780952,1.0470474879476,0,1.36609096991689,0.971020706062307,18.3809354244343,19.0588630692687,18.5382219683298,15.6478268869608,17.0059621976748,15.817405156882,25.0814569805826,20.0180582924268,12.9377307928474,6.54352163625172,5.80289713609076,8.06625117941913,18.5226793945882,28.3668105539369,29.9089813520917,10.7227724255587,12.1667925232568,13.9442908771359,21.3472055203553,16.8966011261116,11.2487464660175,8.89979726310277,7.104801149461,11.085204089181,10.373894243682,14.2054768862614,13.095576018174,15.7743721013537,12.8542942981712,17.8903518170807,12.6165523191403,14.2809751817172,17.4651569455904,30.8324466798288,38.6892634398119,43.9314685112856,11.6059933202571,12.7167824607349,13.5437476344758,37.1313388671837,19.6966913511088,34.9907987408895,10.0173719061047,14.0947963991112,8.57437450796383,23.6265723199534,17.7593166250946,25.7979394944493,21.5105969245347,19.039197343817,27.5248627735287,30.5394916200404,30.0178014355215,18.3982190372595,24.7123967738184,24.6796704372725,26.5004680882755,34.0841075859567,43.6310023208681,73.8935195149272,71.1066703153331,7.57718643539249,10.6411143499541,6.57181778519218,18.7261562739258,10.8753911131812,16.7739617143252,20.2977832316379,11.2652226975492,18.2186242832286,16.7302131013411,17.1679512418129,25.0076516746054,61.5515469658591,17.0627241165496,10.6153266233985,36.2357743882197,19.2132121060542,20.8496358848145,9.31958806090611,19.6163133997737,19.4785437336513,15.0719662573069,6.58983184782562,2.99951365496704,6.73472203487243,28.4602214869163,23.7900313465686,7.413606774659,15.4703644971126,10.9957646652042,25.973505569945,22.2270530402828,31.875720885149,13.43595282589,10.3616330957807,81.4409982280654,21.8602344177342,23.6799167566477,22.3277040958633,17.9338733224501,18.6420007674638,18.3202620007335,22.8632207925738,39.3229123523304,39.2333747137773,34.7955187508787,38.7092473160687,36.3864915829774,38.3705203931325,32.3874514865615,29.8384097791518,24.2821805518562,8.42655824775882,4.63226232806487,6.53576048609863,21.7482061162277,20.4037672183554,21.4273853138608,17.0456209621351,18.8893662477508,17.2779166433864,19.5328513590343,17.4377710909752,22.1854150497622,21.3927804887525,19.2075932972541,20.1861335769181,25.0001978497318,19.7595103761946,21.0704077453784,25.8656636733877,11.0107935245834,57.1624494561971,26.1806060996909,22.3952663061996,21.3657738111603,17.7837096624489,21.5801371346977,23.5720726475563,23.2075263857322,27.5226855695817,25.6930369369457,26.138861715228,17.9060824837036,30.0244694163445,23.3693046250098,25.9365659849633,22.7021051509979,24.8464950248537,21.3644718580193,16.9061603509621,19.3468761453049,16.8738663835834,20.1289803085214,17.8327034690406,13.8753539100826,14.7578804170892,13.8204823592417,22.8268522857105,11.1786220829783,9.23827277032054,7.42044970870017,9.33156558387113,7.47649195232492,9.93040821947537,14.3848068725405,9.72811360650212,13.1789478330279,10.0637744569148,22.7005978077787,22.4667124642484,32.5826752551774,23.6804585848924,27.0168371963486,19.0295785871603,29.5606602361956,19.2298672201591,22.0668611507745,17.3670783733492,13.5680068527871,13.8065311713888,20.6841666729267,17.8127712839996,19.710357378741,24.7154891419105,16.877921415721,20.7221978239075,19.8169210256671,24.1266054302836,14.1415477792864,20.6540994667995,20.6952559728549,44.6330640166062,37.7421630826894,28.3607455501649,21.7124997395761,20.8235424814729,15.6175497718655,20.2497993868831,26.2865677747807,18.0466926006739,24.3445816478396,17.8116708736954,17.82760733259,23.7172666767914,15.7447445046685,15.0456490320765,34.188595904113,28.1794439681687,15.0122811905007,58.4078608695836,25.2491861601181,24.1858845571801,24.7072654480227,29.2348873951965,34.7401717176638,30.4945385938501,25.8108947929029,23.5288269733916,36.3442271626188,46.3841877729995,63.9440368138758,47.6615448055303,27.3692862927592,24.7075086025061,25.7204442037911,23.5862510744224,33.8900753443934,27.3151374199521,27.0973804711993,11.7335854031855,27.5381692122966,23.8170669899359,28.525321758876,25.0269861378654,21.8935917489206,22.0838836405802,20.6817533678777,29.4395644996149,44.5020724825223,7.34744787430767,22.0833948720648,13.1488114432495,6.59289599516419,5.74115756428306,4.80434163733698,10.3686842296252,7.83728133012485,8.98299829728755,3.81868247206045,25.7813834768625,19.7219883113043,19.4409613479242,17.9815934572443,13.9752040797554,15.3745354878696,16.1174238664405,10.2084817373772,9.33227807700909,33.552322906694,8.45539408026285,21.9789322684649,21.6750622498798,31.1121901350476,22.8612887555584,19.767866682421,18.3077292287376,20.1816796508123,14.3657301863224,13.5287107662563,15.8416503441826,8.84831137758899,19.4616206678558,15.5093545318889,12.3424781828905,12.8899220880587,11.1261558677508,11.7791540529569,9.30444021199837,7.77441664600737,8.38274873204998,8.36857336635776,9.35595655101623,10.2946670555153,8.41513695707296,19.4988129909082,26.1943424981396,26.3758738431859,21.321346278238,15.0687883345109,12.7624083306804,12.2711588259068,15.4345232936927,19.5613120573792,7.90652579663893,6.44455331110048,9.73922372846974,5.84300819968538,15.0718154349541,10.5755145634558,18.2256075062588,9.90706647093285,14.9536994964788,7.7664046762773,35.3914855262042,20.7492934168536,22.7075695652998,24.5537784238977,28.2977769547776,29.7826483689023,23.113659691368,24.3121367541895,23.1061830906107,20.9738685763952,20.5318232911094,24.5214243801899,26.9687541513261,27.1466646196646,28.7177344778066,26.6724467118521,33.3746858721184,29.7080199514106,28.0218412546248,25.4654131832507,25.0294554241353,25.9114676992633,30.9967046931517,26.8890870769808,25.8800796142159,26.9074453095531,20.8537889074961,26.5700408552221,28.3830597937851,21.3234063229941,25.6251639148216,34.2795598666961,29.4646351082176,28.8182524605897,23.7275131506804,22.4829520144151,28.5396562303398,19.9830080264917,22.3807348520547,24.2650561031467,20.4043695345971
|phase1_expression=29.1470901730725,20.9385244583617,16.3799726180233,40.8326685264221,37.567179745976,8.56184286750638,9.81173090501208,9.68424925811822,3.801295498095,2.80877431586392,9.07455231595176,11.0085579413564,7.70403284690426,8.13009742496676,6.32908547449759,6.68168382386426,8.39474253753776,8.04428521663506,6.85572168028694,5.51706547337439,14.7124891961351,9.03547655928056,11.7539905112521,15.359272588167,9.1763712426868,13.2073351746455,13.3536218809313,11.2045040996662,10.2612646506442,12.3494763582366,7.09537634096975,8.25539875497521,6.76571266343027,0,8.66554859253824,6.15068187826422,9.39179038806898,3.34825304589526,3.1253413780952,1.0470474879476,0,1.36609096991689,0.971020706062307,18.3809354244343,19.0588630692687,18.5382219683298,15.6478268869608,17.0059621976748,15.817405156882,25.0814569805826,20.0180582924268,12.9377307928474,6.54352163625172,5.80289713609076,8.06625117941913,18.5226793945882,28.3668105539369,29.9089813520917,10.7227724255587,12.1667925232568,13.9442908771359,21.3472055203553,16.8966011261116,11.2487464660175,8.89979726310277,7.104801149461,11.085204089181,10.373894243682,14.2054768862614,13.095576018174,15.7743721013537,12.8542942981712,17.8903518170807,12.6165523191403,14.2809751817172,17.4651569455904,30.8324466798288,38.6892634398119,43.9314685112856,11.6059933202571,12.7167824607349,13.5437476344758,37.1313388671837,19.6966913511088,34.9907987408895,10.0173719061047,14.0947963991112,8.57437450796383,23.6265723199534,17.7593166250946,25.7979394944493,21.5105969245347,19.039197343817,27.5248627735287,30.5394916200404,30.0178014355215,18.3982190372595,24.7123967738184,24.6796704372725,26.5004680882755,34.0841075859567,43.6310023208681,73.8935195149272,71.1066703153331,7.57718643539249,10.6411143499541,6.57181778519218,18.7261562739258,10.8753911131812,16.7739617143252,20.2977832316379,11.2652226975492,18.2186242832286,16.7302131013411,17.1679512418129,25.0076516746054,61.5515469658591,17.0627241165496,10.6153266233985,36.2357743882197,19.2132121060542,20.8496358848145,9.31958806090611,19.6163133997737,19.4785437336513,15.0719662573069,6.58983184782562,2.99951365496704,6.73472203487243,28.4602214869163,23.7900313465686,7.413606774659,15.4703644971126,10.9957646652042,25.973505569945,22.2270530402828,31.875720885149,13.43595282589,10.3616330957807,81.4409982280654,21.8602344177342,23.6799167566477,22.3277040958633,17.9338733224501,18.6420007674638,18.3202620007335,22.8632207925738,39.3229123523304,39.2333747137773,34.7955187508787,38.7092473160687,36.3864915829774,38.3705203931325,32.3874514865615,29.8384097791518,24.2821805518562,8.42655824775882,4.63226232806487,6.53576048609863,21.7482061162277,20.4037672183554,21.4273853138608,17.0456209621351,18.8893662477508,17.2779166433864,19.5328513590343,17.4377710909752,22.1854150497622,21.3927804887525,19.2075932972541,20.1861335769181,25.0001978497318,19.7595103761946,21.0704077453784,25.8656636733877,11.0107935245834,57.1624494561971,26.1806060996909,22.3952663061996,21.3657738111603,17.7837096624489,21.5801371346977,23.5720726475563,23.2075263857322,27.5226855695817,25.6930369369457,26.138861715228,17.9060824837036,30.0244694163445,23.3693046250098,25.9365659849633,22.7021051509979,24.8464950248537,21.3644718580193,16.9061603509621,19.3468761453049,16.8738663835834,20.1289803085214,17.8327034690406,13.8753539100826,14.7578804170892,13.8204823592417,22.8268522857105,11.1786220829783,9.23827277032054,7.42044970870017,9.33156558387113,7.47649195232492,9.93040821947537,14.3848068725405,9.72811360650212,13.1789478330279,10.0637744569148,22.7005978077787,22.4667124642484,32.5826752551774,23.6804585848924,27.0168371963486,19.0295785871603,29.5606602361956,19.2298672201591,22.0668611507745,17.3670783733492,13.5680068527871,13.8065311713888,20.6841666729267,17.8127712839996,19.710357378741,24.7154891419105,16.877921415721,20.7221978239075,19.8169210256671,24.1266054302836,14.1415477792864,20.6540994667995,20.6952559728549,44.6330640166062,37.7421630826894,28.3607455501649,21.7124997395761,20.8235424814729,15.6175497718655,20.2497993868831,26.2865677747807,18.0466926006739,24.3445816478396,17.8116708736954,17.82760733259,23.7172666767914,15.7447445046685,15.0456490320765,34.188595904113,28.1794439681687,15.0122811905007,58.4078608695836,25.2491861601181,24.1858845571801,24.7072654480227,29.2348873951965,34.7401717176638,30.4945385938501,25.8108947929029,23.5288269733916,36.3442271626188,46.3841877729995,63.9440368138758,47.6615448055303,27.3692862927592,24.7075086025061,25.7204442037911,23.5862510744224,33.8900753443934,27.3151374199521,27.0973804711993,11.7335854031855,27.5381692122966,23.8170669899359,28.525321758876,25.0269861378654,21.8935917489206,22.0838836405802,20.6817533678777,29.4395644996149,44.5020724825223,7.34744787430767,22.0833948720648,13.1488114432495,6.59289599516419,5.74115756428306,4.80434163733698,10.3686842296252,7.83728133012485,8.98299829728755,3.81868247206045,25.7813834768625,19.7219883113043,19.4409613479242,17.9815934572443,13.9752040797554,15.3745354878696,16.1174238664405,10.2084817373772,9.33227807700909,33.552322906694,8.45539408026285,21.9789322684649,21.6750622498798,31.1121901350476,22.8612887555584,19.767866682421,18.3077292287376,20.1816796508123,14.3657301863224,13.5287107662563,15.8416503441826,8.84831137758899,19.4616206678558,15.5093545318889,12.3424781828905,12.8899220880587,11.1261558677508,11.7791540529569,9.30444021199837,7.77441664600737,8.38274873204998,8.36857336635776,9.35595655101623,10.2946670555153,8.41513695707296,19.4988129909082,26.1943424981396,26.3758738431859,21.321346278238,15.0687883345109,12.7624083306804,12.2711588259068,15.4345232936927,19.5613120573792,7.90652579663893,6.44455331110048,9.73922372846974,5.84300819968538,15.0718154349541,10.5755145634558,18.2256075062588,9.90706647093285,14.9536994964788,7.7664046762773,35.3914855262042,20.7492934168536,22.7075695652998,24.5537784238977,28.2977769547776,29.7826483689023,23.113659691368,24.3121367541895,23.1061830906107,20.9738685763952,20.5318232911094,24.5214243801899,26.9687541513261,27.1466646196646,28.7177344778066,26.6724467118521,33.3746858721184,29.7080199514106,28.0218412546248,25.4654131832507,25.0294554241353,25.9114676992633,30.9967046931517,26.8890870769808,25.8800796142159,26.9074453095531,20.8537889074961,26.5700408552221,28.3830597937851,21.3234063229941,25.6251639148216,34.2795598666961,29.4646351082176,28.8182524605897,23.7275131506804,22.4829520144151,28.5396562303398,19.9830080264917,22.3807348520547,24.2650561031467,20.4043695345971
|short_description=p1@Spg20
|short_description=p1@Spg20
}}
}}

Revision as of 11:24, 19 April 2012

Short description:p1@Spg20
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Spg20_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000044116, ENSMUST00000107971, ENSMUST00000118118, NM_001144987, NM_001144988, NM_144895, uc008pga.2, uc008pgb.2, uc008pgc.2, uc008pgd.1, uc008pge.2_5end
EntrezGene:Spg20
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Spg20

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G729.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I520.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.83
CD326+ enterocyte, pool2.CNhs13197.11849-124I437.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I78.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I89.81
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.01
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.68
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.86
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I911.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D29.18
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I211.20
Ileum epithelium, pool1.CNhs13199.10252-104B910.26
Ileum epithelium, pool2.CNhs13232.10253-104C112.35
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G66.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.67
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.15
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.06
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.54
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.82
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C420.02
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.54
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.80
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.52
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C529.91
Mouse Granule cells, donor1.CNhs12131.11713-123C310.72
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C621.35
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.10
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D915.77
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.28
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.93
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E437.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F614.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.57
Mouse Schwann, donor1.CNhs12507.11728-123D923.63
Mouse Schwann, donor2.CNhs12573.11746-123F917.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F721.51
Mouse hepatocyte, donor1.CNhs13078.11714-123C419.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C827.52
Mouse hepatocyte, donor6.CNhs13090.11822-124F430.54
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.02
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I724.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I826.50
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G634.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H143.63
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I873.89
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B671.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.57
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B618.73
accessory axillary lymph node, adult.CNhs10475.1063-29H910.88
adrenal gland, adult.CNhs10508.49-24D716.77
adrenal gland, embryo E14.CNhs11038.406-44C520.30
adrenal gland, embryo E16.CNhs11004.1254-43D611.27
adrenal gland, embryo E17.CNhs11043.1263-45I118.22
adrenal gland, embryo E18.CNhs11026.1262-18F516.73
adrenal gland, neonate N00.CNhs11191.1311-23C117.17
adrenal gland, neonate N25.CNhs11223.1377-27I325.01
amnion, adult pregnant day17.5.CNhs10488.583-22A861.55
aorta, adult.CNhs10498.46-23H117.06
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F536.24
bone (os femoris), neonate N16.CNhs11225.1525-43A619.21
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B219.62
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H715.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C76.59
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.73
corpora quadrigemina, adult.CNhs10501.16-22A428.46
corpus striatum, adult.CNhs10487.19-21D823.79
corpus striatum, neonate N00.CNhs11226.630-43F17.41
cortex, adult.CNhs10473.12-14D515.47
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F225.97
diencephalon, neonate N30.CNhs11201.1388-42B222.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A213.44
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G481.44
eyeball, embryo E12.CNhs11016.345-16C621.86
eyeball, embryo E14.CNhs10521.399-16E223.68
eyeball, embryo E15.CNhs10593.426-16C922.33
eyeball, embryo E17.CNhs11023.1261-18D417.93
eyeball, neonate N00.CNhs11207.633-15C618.64
eyeball, neonate N01.CNhs11140.1532-43E718.32
eyeball, neonate N02.CNhs11205.1551-44G822.86
eyeball, neonate N16.CNhs11188.777-19A239.32
forelimb, embryo E11.CNhs10596.335-25E239.23
forelimb, embryo E12.CNhs10600.359-14H234.80
forelimb, embryo E13.CNhs10589.384-1E238.71
forelimb, embryo E14.CNhs10577.413-26A836.39
forelimb, embryo E15.CNhs11007.437-20E738.37
forelimb, embryo E17.CNhs10598.1517-43C432.39
forelimb, embryo E18.CNhs11008.1520-43B529.84
gonad, embryo E13.CNhs11044.1564-45I624.28
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E921.75
heart, embryo E12.CNhs11015.353-12F520.40
heart, embryo E13.CNhs11013.376-3I921.43
heart, embryo E14.CNhs10597.403-26D417.05
heart, embryo E15.CNhs11017.431-16C818.89
heart, embryo E16.CNhs11021.457-17C617.28
heart, embryo E17.CNhs11025.479-18E519.53
heart, embryo E18.CNhs11030.1283-20G317.44
heart, neonate N00.CNhs11213.639-21E322.19
heart, neonate N03.CNhs11221.1349-25I221.39
heart, neonate N10.CNhs11118.749-24G119.21
heart, neonate N16.CNhs11209.782-15G120.19
heart, neonate N20.CNhs11127.821-26I625.00
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D221.07
hippocampus, adult.CNhs10478.13-16E825.87
hippocampus, neonate N00.CNhs11228.627-43G111.01
intestinal mucosa, adult.CNhs10506.860-29I357.16
intestine, adult.CNhs10496.178-9A326.18
intestine, embryo E12.CNhs11019.1251-16I522.40
intestine, embryo E13.CNhs11010.381-16D521.37
intestine, embryo E15.CNhs10602.976-16D817.78
intestine, embryo E16.CNhs10585.463-22H421.58
intestine, embryo E17.CNhs10582.482-18D323.57
intestine, embryo E18.CNhs10526.1289-20F723.21
intestine, neonate N00.CNhs11126.644-26D127.52
intestine, neonate N01.CNhs11192.1322-23E925.69
intestine, neonate N06.CNhs11102.688-20B826.14
intestine, neonate N07.CNhs11095.720-20F217.91
intestine, neonate N10.CNhs11098.755-23A530.02
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E325.94
intestine, neonate N30.CNhs11131.1384-42G122.70
kidney, embryo E14.CNhs10606.411-4I924.85
kidney, embryo E15.CNhs10997.434-16F821.36
kidney, embryo E16.CNhs10584.464-22A516.91
kidney, embryo E17.CNhs11028.483-18I219.35
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G720.13
kidney, neonate N10.CNhs11206.758-6D517.83
kidney, neonate N20.CNhs11113.832-19I113.88
kidney, neonate N25.CNhs11122.1353-25F314.76
kidney, neonate N30.CNhs11203.1385-42H113.82
liver, adult pregnant day01.CNhs10466.508-5B222.83
liver, embryo E12.CNhs10601.355-15F811.18
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E17.42
liver, embryo E15.CNhs10520.433-16D79.33
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G414.38
liver, neonate N00.CNhs11117.641-24F49.73
liver, neonate N03.CNhs11123.1345-25G213.18
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H222.70
liver, neonate N10.CNhs11115.751-24B922.47
liver, neonate N20.CNhs11220.823-25A332.58
liver, neonate N25.CNhs11198.1368-26H123.68
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B119.03
lung, embryo E12.CNhs10522.354-16G229.56
lung, embryo E14.CNhs10604.404-26F819.23
lung, embryo E15.CNhs11020.432-17C522.07
lung, embryo E16.CNhs10998.458-17B617.37
lung, embryo E17.CNhs10605.480-44A613.57
lung, embryo E18.CNhs10583.1287-20I613.81
lung, neonate N00.CNhs11224.640-42C620.68
lung, neonate N06.CNhs11212.683-20E517.81
lung, neonate N07.CNhs11111.715-19A319.71
lung, neonate N10.CNhs11219.750-23E624.72
lung, neonate N20.CNhs11109.822-18A416.88
lung, neonate N25.CNhs11119.1359-25C720.72
lung, neonate N30.CNhs11133.1394-42H219.82
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H220.70
medulla oblongata, adult.CNhs10477.17-12C244.63
medulla oblongata, neonate N30.CNhs11200.1396-42A337.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C728.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.71
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E120.82
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D726.29
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D924.34
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D417.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D517.83
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I915.74
ovary, adult.CNhs10507.91-2I715.05
ovary, embryo E18.CNhs11040.505-44H734.19
ovary, neonate N00.CNhs11217.1299-22I428.18
oviduct, adult pregnant day01.CNhs10500.988-6G615.01
pancreas, adult.CNhs10486.34-16E458.41
pancreas, embryo E14.CNhs11012.405-44F425.25
pancreas, embryo E15.CNhs11042.1556-45F224.19
pancreas, embryo E16.CNhs11003.460-26E524.71
pancreas, embryo E17.CNhs10599.1558-45G329.23
pancreas, embryo E18.CNhs10580.1535-43I734.74
pancreas, neonate N00.CNhs11105.645-26G930.49
pancreas, neonate N01.CNhs11138.1531-43D725.81
pancreas, neonate N02.CNhs11139.1539-43D823.53
pancreas, neonate N16.CNhs11136.787-43B636.34
pancreas, neonate N25.CNhs11094.1555-45E246.38
pancreas, neonate N30.CNhs11182.1548-44H563.94
pituitary gland, adult.CNhs10493.21-1G847.66
pituitary gland, embryo E12.CNhs11018.346-16E627.37
pituitary gland, embryo E13.CNhs11009.370-44C724.71
pituitary gland, embryo E14.CNhs11037.398-44A525.72
pituitary gland, embryo E15.CNhs10592.427-16B923.59
pituitary gland, embryo E16.CNhs11036.449-43F633.89
pituitary gland, embryo E17.CNhs11039.1265-44F527.32
pituitary gland, neonate N00.CNhs11190.1308-22E927.10
placenta, adult pregnant day10.CNhs10472.539-13I711.73
placenta, adult pregnant day17.CNhs10464.577-18G327.54
prostate, adult.CNhs10470.859-1F823.82
skin, adult.CNhs10492.30-1C328.53
skin, neonate N00.CNhs11124.650-25G425.03
skin, neonate N03.CNhs11215.662-22H321.89
skin, neonate N06.CNhs11097.693-20I522.08
skin, neonate N10.CNhs11108.762-6C420.68
small intestine, neonate N16.CNhs11114.790-21I129.44
spinal cord, adult.CNhs10505.24-13C944.50
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C122.08
spleen, embryo E18.CNhs11011.1271-21F213.15
spleen, neonate N10.CNhs11116.752-24D16.59
spleen, neonate N20.CNhs11112.824-19H15.74
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.98
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E325.78
stomach, embryo E15.CNhs10603.1252-16G819.72
stomach, embryo E16.CNhs11022.459-17D419.44
stomach, embryo E17.CNhs11006.1035-18D517.98
stomach, embryo E18.CNhs10999.1286-20C613.98
stomach, neonate N03.CNhs11193.1340-24B815.37
stomach, neonate N07.CNhs11210.718-18A916.12
stomach, neonate N25.CNhs11104.1355-25E410.21
stomach, neonate N30.CNhs11134.1386-42I19.33
submandibular gland, adult.CNhs10469.59-29C133.55
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F521.98
testis, embryo E15.CNhs11034.443-27C521.68
testis, embryo E16.CNhs11033.470-26G531.11
testis, embryo E17.CNhs11029.486-18I522.86
testis, embryo E18.CNhs11027.503-18G519.77
testis, neonate N00.CNhs11189.1300-22B718.31
testis, neonate N07.CNhs11222.726-26I420.18
testis, neonate N10.CNhs11204.763-44D914.37
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E215.84
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I419.46
thymus, embryo E15.CNhs11005.430-45I215.51
thymus, embryo E16.CNhs11002.456-26C512.34
thymus, embryo E17.CNhs10581.478-18C112.89
thymus, embryo E18.CNhs10595.1273-19G411.13
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C79.30
thymus, neonate N06.CNhs11197.681-26C47.77
thymus, neonate N07.CNhs11211.713-19D38.38
thymus, neonate N10.CNhs11194.748-24E48.37
thymus, neonate N20.CNhs11186.820-7A29.36
thymus, neonate N25.CNhs11125.1362-25G710.29
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B419.50
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.19
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F726.38
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G521.32
urinary bladder, adult.CNhs10481.879-12E415.07
uterus, adult pregnant day19.CNhs10497.590-15F512.76
uterus, adult.CNhs10509.92-27E512.27
vagina, adult.CNhs10502.89-27D515.43
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.95
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I835.39
whole body, embryo E12.CNhs10587.857-27C920.75
whole body, embryo E13.CNhs10512.372-23H222.71
whole body, embryo E14.5.CNhs10578.420-27D224.55
whole body, embryo E14.CNhs10519.395-14B128.30
whole body, embryo E16.CNhs10514.453-14F229.78
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G520.97
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G524.52
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G526.97
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G533.37
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.71
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G528.02
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G525.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G525.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G525.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G531.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G525.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.85
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G528.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.32
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G525.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G534.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.82
whole body, embryo E17.5.CNhs10513.490-9F923.73
whole body, embryo E17.CNhs10517.475-3I522.48
whole body, embryo E18.CNhs10516.493-3B328.54
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C622.38
whole body, neonate N06.CNhs10515.692-21D124.27
whole body, neonate N10.CNhs10518.761-6B420.40





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:54916002..54916093,%2B&oldid=1063191"