Personal tools

FFCP PHASE1:Mm9::chr9:59598683..59598725,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_3_at_Myo9a_5end
|description=CAGE_peak_3_at_Myo9a_5end
|id=chr9:59598683..59598725,+
|id=chr9:59598683..59598725,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=5.60520964866779,0.697950815278722,1.36499771816861,1.20985684522732,3.00537437967808,1.84667199103079,0.700837921786577,3.48632973292256,8.58811205125167,7.0219357896598,6.16384685611818,7.0199499915896,4.28001824828014,3.93391810885488,5.3297561890506,6.2767332890846,4.19737126876888,4.25873923233621,6.17014951225825,5.51706547337439,7.48380953329414,2.18440092641948,2.35079810225042,0.639969691173627,2.06468352960453,1.14846392823004,1.7230479846363,0.646413698057667,1.90023419456374,1.26015064879965,0.886922042621219,5.71527606113668,1.23012957516914,0,2.3108129580102,2.1610503896604,3.47087905646027,1.67412652294763,0.7813353445238,2.61761871986899,1.76469446409304,4.09827290975067,3.39857247121808,2.39203954153597,2.73717714292689,2.9367480345869,0,1.52617609466313,0.659058548203415,0.972149495371417,1.1198913730029,0,4.69791296961662,3.62681071005672,6.04968838456435,3.60163210450326,8.5960031981627,2.06268836910977,3.23706337375356,4.7609188134483,3.1691570175309,2.03306719241479,0.889294796111139,2.6996991518442,3.9554654502679,0.7104801149461,1.19840044207362,0.384218305321555,5.70292867696627,2.8351247049655,3.99617426567626,2.85650984403804,3.3130281142742,5.38959516545798,3.25874601462004,3.67687514644008,11.0115880999389,8.04430229936683,11.366883460962,2.76961204233407,2.19570344645783,4.16730696445408,6.14202597803038,7.31591393041184,8.25110537994775,9.42811473515737,7.11858403995515,4.47358669980721,6.51245262665383,6.57472572929034,0.579728977403356,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,3.93244376368905,3.57903677413921,2.07828803682295,4.94675404314476,6.76048414928066,8.98285341900225,12.7402619853323,21.3320010945999,0.865964164044856,0.760079596425296,0,3.31133251185274,6.73238497482646,4.15637989381509,4.16364784238726,5.1759131313064,5.5347719341454,3.91878865436819,6.46737889246376,3.39299796590124,5.6854842578906,5.20557684911682,3.5384422077995,5.66183974815932,5.07935492458905,8.727754556434,3.72783522436244,11.1256702864388,8.16842156572475,2.55457055208591,1.91704199209472,1.19980546198682,2.92261522268049,11.5338792341713,10.5225138648284,19.3507702253811,13.9059456153821,12.7857728665165,8.93488591606108,11.356888414743,9.06370338267815,3.98102305952298,5.30717792710717,4.8401626853889,4.94457683258274,5.51765050640335,4.86167750474443,6.48030716693575,6.39543092022482,7.81493693737584,8.05834831213668,6.72628763921441,2.15567992932842,6.24050064553804,6.862093842394,5.04150184583422,9.73165372289593,9.75106066262066,11.5237996388448,8.95654200683219,0.702213187313235,1.02939162845886,1.13665399758237,4.97101854085205,5.39409937956521,7.02242039697958,5.91861838963026,8.06733350164356,6.17068451549513,5.8133486187602,5.90201483079162,5.02090972178829,6.58239399653922,3.77585167381919,4.53985333456792,5.4093995347373,5.92785311285837,4.42881181909227,11.9865270681553,12.5543627102727,1.32167513193519,1.58670339998127,5.11891801284562,7.43157349953403,7.86091514064769,5.24377164020691,3.7804267453628,3.80451252225118,1.89811624617805,2.79988223030818,3.77002813200404,4.17808591286417,5.06906626509712,0.898819408654221,2.80979464837102,2.38969527905241,1.70701110857774,9.02563249616858,7.88954149711563,7.33144780243131,7.95205197387266,8.06561928738663,10.4972651626267,7.0852871030209,8.63493003127561,5.30607804863742,2.07516838961004,6.50695912292767,6.87956482896211,4.94696647246678,7.70868461276311,5.788251834058,7.38414970166117,4.02774592431135,4.70192157647603,1.64736847912849,8.62609239164127,2.23284568601102,1.5601883655728,3.03094653536534,0.358794827043824,0,8.12914036733061,4.73728529426212,7.17045896344914,6.62005834523234,3.98973422090454,7.03526281255626,8.56957107189649,8.78101415360095,11.5073655197519,6.86540537911202,8.29164797018933,9.99566219766002,7.25276923836761,8.10034728056465,3.01582567878545,3.80733978673097,1.96705709207614,1.93155722413313,12.2018448390722,10.1974167335217,5.08198330667694,4.03953483526997,3.15508219416257,3.90438744296638,4.30846795465598,4.30143836314594,5.34716817797746,6.22768367735431,4.04810701674894,4.9683495844923,7.51046778098395,10.6036034419196,9.08416545332919,6.05423052468668,8.1443479676788,6.26886467295635,2.65490276679926,3.39892890616974,3.02323556964751,2.64047111658257,2.06711325016541,3.68922177532713,5.42699415653264,6.18007340111759,6.77345018930971,2.84433082142234,3.16255825724996,0,6.46835250932197,5.221771726908,1.81102157295856,5.14408884075822,5.14286677562593,5.35106452806212,6.58196082408484,2.13125464380219,3.28540391289194,4.66030555900404,1.54369878638473,16.818397800031,10.0107944551461,10.7357006372117,10.504766272276,16.2499490747611,2.62332752966866,11.1255181206306,7.00570611271196,4.33412422722767,6.85219751267933,7.15800136617826,7.51818252465638,8.92234875505438,1.5298058699447,2.37917468950219,2.07299960706636,0,4.27053591334533,6.91286188231286,8.6404272657441,9.19988502463662,7.64268973111622,5.79916689454729,7.19085064810423,4.4498510137285,1.42576470620972,6.21339313086926,11.2738587736838,7.027277664067,4.46737924234164,7.38914515707381,6.19967152693109,5.91346439217724,6.21993364822496,8.33308063001281,13.2122773976396,11.3544536788223,9.50499020650956,4.4241556887945,2.63542779877213,2.56777392912068,2.20865399062252,3.04345382634718,2.98022032171897,3.12508168751919,2.80610101631697,3.02899349844443,2.74344503957999,3.02478555410522,4.28814675254911,3.55983814069219,3.74006086981021,8.38902419376282,4.66170502085536,2.15313255862742,2.01461539636894,6.56844619709447,8.07034644440082,5.86085197655248,5.78794623513478,5.01572104035363,10.1655331671072,11.0478056761722,11.4579102687879,5.67115501734169,8.22099023724771,15.107877947794,12.1504050041725,13.0593148935024,13.1411298605419,10.3552062350364,3.42498247027783,7.58147259461959,5.46347538413229,8.99494853152688,7.1268475293514,6.80220981265052,10.8900896622791,8.44743734679466,8.02298023979538,8.84440241173291,7.60437899670719,12.260712190095,10.6751318515666,9.60377286073039,9.30454597080935,8.57328644309533,11.1248952907061,10.8029163459675,9.06588981767275,12.3647092912894,11.6575545811041,9.05126611412621,12.3986818772607,8.72078499793971,9.69326618277905,10.4075967706762,13.5366699925852,11.0489278803894,12.6297825876651,16.2731258780744,13.1684870117833,10.5399796141853,11.0492381655816,10.3807683594597,8.8737041051325,5.49583271463481,10.0590591631526,5.15690529715916,6.12122662620299,4.63241980150983,6.72416723299222
|phase1_expression=5.60520964866779,0.697950815278722,1.36499771816861,1.20985684522732,3.00537437967808,1.84667199103079,0.700837921786577,3.48632973292256,8.58811205125167,7.0219357896598,6.16384685611818,7.0199499915896,4.28001824828014,3.93391810885488,5.3297561890506,6.2767332890846,4.19737126876888,4.25873923233621,6.17014951225825,5.51706547337439,7.48380953329414,2.18440092641948,2.35079810225042,0.639969691173627,2.06468352960453,1.14846392823004,1.7230479846363,0.646413698057667,1.90023419456374,1.26015064879965,0.886922042621219,5.71527606113668,1.23012957516914,0,2.3108129580102,2.1610503896604,3.47087905646027,1.67412652294763,0.7813353445238,2.61761871986899,1.76469446409304,4.09827290975067,3.39857247121808,2.39203954153597,2.73717714292689,2.9367480345869,0,1.52617609466313,0.659058548203415,0.972149495371417,1.1198913730029,0,4.69791296961662,3.62681071005672,6.04968838456435,3.60163210450326,8.5960031981627,2.06268836910977,3.23706337375356,4.7609188134483,3.1691570175309,2.03306719241479,0.889294796111139,2.6996991518442,3.9554654502679,0.7104801149461,1.19840044207362,0.384218305321555,5.70292867696627,2.8351247049655,3.99617426567626,2.85650984403804,3.3130281142742,5.38959516545798,3.25874601462004,3.67687514644008,11.0115880999389,8.04430229936683,11.366883460962,2.76961204233407,2.19570344645783,4.16730696445408,6.14202597803038,7.31591393041184,8.25110537994775,9.42811473515737,7.11858403995515,4.47358669980721,6.51245262665383,6.57472572929034,0.579728977403356,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,3.93244376368905,3.57903677413921,2.07828803682295,4.94675404314476,6.76048414928066,8.98285341900225,12.7402619853323,21.3320010945999,0.865964164044856,0.760079596425296,0,3.31133251185274,6.73238497482646,4.15637989381509,4.16364784238726,5.1759131313064,5.5347719341454,3.91878865436819,6.46737889246376,3.39299796590124,5.6854842578906,5.20557684911682,3.5384422077995,5.66183974815932,5.07935492458905,8.727754556434,3.72783522436244,11.1256702864388,8.16842156572475,2.55457055208591,1.91704199209472,1.19980546198682,2.92261522268049,11.5338792341713,10.5225138648284,19.3507702253811,13.9059456153821,12.7857728665165,8.93488591606108,11.356888414743,9.06370338267815,3.98102305952298,5.30717792710717,4.8401626853889,4.94457683258274,5.51765050640335,4.86167750474443,6.48030716693575,6.39543092022482,7.81493693737584,8.05834831213668,6.72628763921441,2.15567992932842,6.24050064553804,6.862093842394,5.04150184583422,9.73165372289593,9.75106066262066,11.5237996388448,8.95654200683219,0.702213187313235,1.02939162845886,1.13665399758237,4.97101854085205,5.39409937956521,7.02242039697958,5.91861838963026,8.06733350164356,6.17068451549513,5.8133486187602,5.90201483079162,5.02090972178829,6.58239399653922,3.77585167381919,4.53985333456792,5.4093995347373,5.92785311285837,4.42881181909227,11.9865270681553,12.5543627102727,1.32167513193519,1.58670339998127,5.11891801284562,7.43157349953403,7.86091514064769,5.24377164020691,3.7804267453628,3.80451252225118,1.89811624617805,2.79988223030818,3.77002813200404,4.17808591286417,5.06906626509712,0.898819408654221,2.80979464837102,2.38969527905241,1.70701110857774,9.02563249616858,7.88954149711563,7.33144780243131,7.95205197387266,8.06561928738663,10.4972651626267,7.0852871030209,8.63493003127561,5.30607804863742,2.07516838961004,6.50695912292767,6.87956482896211,4.94696647246678,7.70868461276311,5.788251834058,7.38414970166117,4.02774592431135,4.70192157647603,1.64736847912849,8.62609239164127,2.23284568601102,1.5601883655728,3.03094653536534,0.358794827043824,0,8.12914036733061,4.73728529426212,7.17045896344914,6.62005834523234,3.98973422090454,7.03526281255626,8.56957107189649,8.78101415360095,11.5073655197519,6.86540537911202,8.29164797018933,9.99566219766002,7.25276923836761,8.10034728056465,3.01582567878545,3.80733978673097,1.96705709207614,1.93155722413313,12.2018448390722,10.1974167335217,5.08198330667694,4.03953483526997,3.15508219416257,3.90438744296638,4.30846795465598,4.30143836314594,5.34716817797746,6.22768367735431,4.04810701674894,4.9683495844923,7.51046778098395,10.6036034419196,9.08416545332919,6.05423052468668,8.1443479676788,6.26886467295635,2.65490276679926,3.39892890616974,3.02323556964751,2.64047111658257,2.06711325016541,3.68922177532713,5.42699415653264,6.18007340111759,6.77345018930971,2.84433082142234,3.16255825724996,0,6.46835250932197,5.221771726908,1.81102157295856,5.14408884075822,5.14286677562593,5.35106452806212,6.58196082408484,2.13125464380219,3.28540391289194,4.66030555900404,1.54369878638473,16.818397800031,10.0107944551461,10.7357006372117,10.504766272276,16.2499490747611,2.62332752966866,11.1255181206306,7.00570611271196,4.33412422722767,6.85219751267933,7.15800136617826,7.51818252465638,8.92234875505438,1.5298058699447,2.37917468950219,2.07299960706636,0,4.27053591334533,6.91286188231286,8.6404272657441,9.19988502463662,7.64268973111622,5.79916689454729,7.19085064810423,4.4498510137285,1.42576470620972,6.21339313086926,11.2738587736838,7.027277664067,4.46737924234164,7.38914515707381,6.19967152693109,5.91346439217724,6.21993364822496,8.33308063001281,13.2122773976396,11.3544536788223,9.50499020650956,4.4241556887945,2.63542779877213,2.56777392912068,2.20865399062252,3.04345382634718,2.98022032171897,3.12508168751919,2.80610101631697,3.02899349844443,2.74344503957999,3.02478555410522,4.28814675254911,3.55983814069219,3.74006086981021,8.38902419376282,4.66170502085536,2.15313255862742,2.01461539636894,6.56844619709447,8.07034644440082,5.86085197655248,5.78794623513478,5.01572104035363,10.1655331671072,11.0478056761722,11.4579102687879,5.67115501734169,8.22099023724771,15.107877947794,12.1504050041725,13.0593148935024,13.1411298605419,10.3552062350364,3.42498247027783,7.58147259461959,5.46347538413229,8.99494853152688,7.1268475293514,6.80220981265052,10.8900896622791,8.44743734679466,8.02298023979538,8.84440241173291,7.60437899670719,12.260712190095,10.6751318515666,9.60377286073039,9.30454597080935,8.57328644309533,11.1248952907061,10.8029163459675,9.06588981767275,12.3647092912894,11.6575545811041,9.05126611412621,12.3986818772607,8.72078499793971,9.69326618277905,10.4075967706762,13.5366699925852,11.0489278803894,12.6297825876651,16.2731258780744,13.1684870117833,10.5399796141853,11.0492381655816,10.3807683594597,8.8737041051325,5.49583271463481,10.0590591631526,5.15690529715916,6.12122662620299,4.63241980150983,6.72416723299222
|short_description=p3@Myo9a
|short_description=p3@Myo9a
}}
}}

Revision as of 07:46, 19 April 2012

Short description:p3@Myo9a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Myo9a_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000128341, ENSMUST00000135298, ENSMUST00000136740_5end
EntrezGene:Myo9a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Myo9a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.59
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.02
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.02
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.26
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.17
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.31
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.60
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.37
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D96.51
Mouse Schwann, donor2.CNhs12573.11746-123F96.57
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.31
accessory axillary lymph node, adult.CNhs10475.1063-29H96.73
adrenal gland, adult.CNhs10508.49-24D74.16
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I15.53
adrenal gland, embryo E18.CNhs11026.1262-18F53.92
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A85.69
aorta, adult.CNhs10498.46-23H15.21
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C38.73
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.92
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.92
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F119.35
cortex, adult.CNhs10473.12-14D513.91
cortex, neonate N30.CNhs11107.1392-42F212.79
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B211.36
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.06
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B25.31
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C94.86
eyeball, embryo E17.CNhs11023.1261-18D46.48
eyeball, neonate N00.CNhs11207.633-15C66.40
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G88.06
eyeball, neonate N16.CNhs11188.777-19A26.73
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H26.24
forelimb, embryo E13.CNhs10589.384-1E26.86
forelimb, embryo E14.CNhs10577.413-26A85.04
forelimb, embryo E15.CNhs11007.437-20E79.73
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B511.52
gonad, embryo E13.CNhs11044.1564-45I68.96
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E94.97
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I97.02
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C88.07
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E55.81
heart, embryo E18.CNhs11030.1283-20G35.90
heart, neonate N00.CNhs11213.639-21E35.02
heart, neonate N03.CNhs11221.1349-25I26.58
heart, neonate N10.CNhs11118.749-24G13.78
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I65.41
heart, neonate N25.CNhs11196.1351-25D35.93
heart, neonate N30.CNhs11202.1390-42D24.43
hippocampus, adult.CNhs10478.13-16E811.99
hippocampus, neonate N00.CNhs11228.627-43G112.55
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D57.43
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A55.07
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F89.03
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C77.95
kidney, neonate N00.CNhs11214.646-21G78.07
kidney, neonate N10.CNhs11206.758-6D510.50
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H15.31
liver, adult pregnant day01.CNhs10466.508-5B22.08
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H66.88
liver, embryo E14.CNhs10594.409-16E14.95
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F55.79
liver, embryo E17.CNhs10510.481-18A37.38
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F44.70
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B18.13
lung, embryo E12.CNhs10522.354-16G24.74
lung, embryo E14.CNhs10604.404-26F87.17
lung, embryo E15.CNhs11020.432-17C56.62
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C68.78
lung, neonate N06.CNhs11212.683-20E511.51
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E68.29
lung, neonate N20.CNhs11109.822-18A410.00
lung, neonate N25.CNhs11119.1359-25C77.25
lung, neonate N30.CNhs11133.1394-42H28.10
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A310.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.08
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.31
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.51
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I79.08
ovary, embryo E18.CNhs11040.505-44H76.05
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E65.22
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C316.82
skin, neonate N00.CNhs11124.650-25G410.01
skin, neonate N03.CNhs11215.662-22H310.74
skin, neonate N06.CNhs11097.693-20I510.50
skin, neonate N10.CNhs11108.762-6C416.25
small intestine, neonate N16.CNhs11114.790-21I12.62
spinal cord, adult.CNhs10505.24-13C911.13
spleen, adult.CNhs10465.25-2G27.01
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F26.85
spleen, neonate N10.CNhs11116.752-24D17.16
spleen, neonate N20.CNhs11112.824-19H17.52
spleen, neonate N25.CNhs11099.1354-25G38.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.27
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D48.64
stomach, embryo E17.CNhs11006.1035-18D59.20
stomach, embryo E18.CNhs10999.1286-20C67.64
stomach, neonate N03.CNhs11193.1340-24B85.80
stomach, neonate N07.CNhs11210.718-18A97.19
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G511.27
testis, embryo E13.CNhs11031.389-23F57.03
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G57.39
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G55.91
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I48.33
testis, neonate N10.CNhs11204.763-44D913.21
testis, neonate N20.CNhs11110.839-18H311.35
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D32.74
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A24.29
thymus, neonate N25.CNhs11125.1362-25G73.56
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B48.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E55.86
vagina, adult.CNhs10502.89-27D55.79
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.17
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A211.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.06
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A813.14
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A910.36
whole body, embryo E11.CNhs11014.324-5I83.42
whole body, embryo E12.CNhs10587.857-27C97.58
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D28.99
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F26.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G511.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.72
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.54
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.38
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C66.12
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B46.72





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:59598683..59598725,%2B&oldid=1045608"