Personal tools

FFCP PHASE1:Mm9::chr1:75313521..75313557,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000160!6.47e-19!43;UBERON:0005409!4.49e-16!59;UBERON:0002108!2.85e-09!16;UBERON:0004119!2.71e-08!130;UBERON:0000925!2.71e-08!130;UBERON:0006595!2.71e-08!130;UBERON:0000344!4.34e-08!15;UBERON:0001007!1.25e-07!128;UBERON:0001555!1.25e-07!128;UBERON:0007026!1.25e-07!128;UBERON:0001242!6.22e-07!13;UBERON:0000060!6.22e-07!13;UBERON:0001262!6.22e-07!13;UBERON:0004786!6.22e-07!13;UBERON:0004921!6.56e-07!126;UBERON:0004185!6.56e-07!126;UBERON:0001264!7.63e-07!12;UBERON:0003922!7.63e-07!12;UBERON:0002114!7.63e-07!12;UBERON:0003923!7.63e-07!12;UBERON:0003924!7.63e-07!12;UBERON:0003921!7.63e-07!12
|phase1_expression=7.8472935081349,121.443441858498,121.939796156396,49.3016664430133,64.6155491630788,18.1309613664841,13.5495331545405,0.774739940649458,1.40788722151667,1.17032263160997,0,0.319088635981346,0.342401459862411,0.34968160967599,0.666219523631325,1.61980213911861,0,0.788655413395594,1.23402990245165,0.84877930359606,2.63634199468316,1.58865521921416,0.783599367416806,39.8381132755583,59.6464130774642,134.94451156703,65.4758234161794,85.7575506089838,59.6673537093014,78.1293402255785,60.5324294088982,5.71527606113668,5.53558308826113,0,9.24325183204079,7.97926297720763,7.75843553797003,0.837063261473815,3.1253413780952,1.0470474879476,1.17646297606203,0.683045484958446,0.971020706062307,21.150665419897,19.8698785190249,19.6395024812999,30.5132624295735,8.06693078607652,11.643367684927,7.19390626574849,16.6583841734181,10.062679505548,1.34226084846189,2.17608642603403,0.336093799142464,34.9872833008888,48.1376179097111,20.6268836910977,3.64169629547276,2.64495489636016,5.07065122804943,39.3059657200193,31.1253178638899,4.49949858640699,3.9554654502679,4.9733608046227,10.4860038681442,7.68436610643109,1.24427534770173,2.56511282830212,2.94454945891935,3.99911378165325,3.97563373712904,1.95985278743926,2.87536413054709,4.5960939330501,2.20231761998777,1.91531007127782,1.0752457327937,3.16527090552465,5.48925861614458,2.6045668527838,1.3959149950069,2.8138130501584,1.68078072554491,3.83017161115768,3.70166370077668,3.54158947068071,2.04460721999597,5.7434385681157,4.34796733052517,10.3250865237766,6.79971333707751,17.2705021324101,11.695975514058,4.92829575807069,8.56710962803686,18.2360445158522,16.6263042945836,23.3204119176825,4.08445917352373,3.84979432242953,2.54805239706646,0,12.5564803786504,12.92135313923,11.62706223534,13.8162494460063,0.258937883647172,1.92974780784272,14.2257967948231,9.43842982767638,4.38169444786511,8.74191315205211,6.46737889246376,3.39299796590124,73.1697104493747,2.02439099687876,0.884610551949874,6.79420769779119,2.87093973998512,3.87900202508178,1.86391761218122,0,0.628340120440365,62.0760644156877,1.43778149407104,2.99951365496704,1.77898317902291,1.3481157546434,1.83000241127451,2.01046963380583,0.173824320192276,0,1.87009240103604,1.1356888414743,9.87841829348068,3.98102305952298,2.52722758433675,1.89397670297827,11.4505989807179,12.644615743841,9.36323074987816,7.83665052745718,7.0757959117381,6.40568601424249,5.71580519814346,4.13925393182425,7.54487975264948,6.80781888604149,5.27853372491847,7.23345917010997,5.83899223373756,7.3132954969655,6.99659263787008,12.7381930763836,2.80885274925294,1.28673953557358,1.13665399758237,8.90640821902658,8.67746421930056,5.04173772090842,4.97163944728941,6.49321964766433,6.17068451549513,7.90615412151387,3.75582761959467,4.2035523252181,5.75959474697182,6.23836363500562,7.1340552400353,5.84799949701329,4.39100230582101,7.64976586934119,0.210289948564127,2.26390147234426,63.4404063328892,33.056320832943,10.8777007772969,12.5407802804637,10.0516619831233,9.88249270654378,13.787438718382,17.690983228468,67.3831267393206,23.0578536613615,16.0854533632172,11.5394753783867,11.307917052909,52.1315257019448,81.4840448027597,68.902880546011,11.3800740571849,10.967857210534,7.88954149711563,7.94240178596726,8.53390943537553,8.13575510727695,6.9560190836683,4.42830443938806,3.29697328466887,5.67626954040282,18.3800628794032,7.34118465150814,8.45203678986773,8.31989815823959,8.92584534109413,10.1294407096015,12.2220408855082,13.2340223227373,9.07957269940198,19.2192989231657,1.43768206527355,7.81495990103857,8.11297950097858,8.08252409430758,17.0427542845817,13.9908621195376,2.95605104266567,11.9379589415405,4.72598431681875,5.60158783058121,7.04070744865506,5.19269398069629,5.47500374037832,8.97614780145875,4.57141917907954,5.75808193086815,3.82691444777969,5.73521601505083,3.7990696010497,4.33947175744535,0,1.08781136763742,2.95058563811422,4.69092468718045,1.9266070798535,2.10981035865966,18.196778936811,3.02965112645248,9.14973836307144,12.4940398174924,3.87762115919038,4.77937595905104,7.12955757063661,4.52922449262132,5.66734982344852,11.3979784585412,7.90575555893047,0.321321316421807,10.2196861349953,12.1084610493734,11.2392001953967,5.60898418106621,22.5666735177937,11.6534705354391,16.9301191900261,33.383099116794,46.3623971822813,31.6658202382245,17.0562673491026,13.8142817201452,16.3988794056972,28.7593449721593,33.7339547439996,29.9093075419742,2.38307724027652,10.8036656418786,9.05510786479281,10.7168517515796,9.3990323830405,8.02659679209317,7.89835298890181,11.8741330154694,21.1204537257339,19.9122146611991,4.19003956304428,3.2977250588296,5.00539722757307,3.79971427047382,4.53614907211919,3.28281799490123,37.6010279252507,0.556275906031529,2.39219233116994,9.49379592630823,3.70389054739423,3.57900068308913,1.77702496037333,2.0590035588587,0.679913719975421,1.25956307091292,2.3493995546752,5.72802370809068,9.17374381385292,7.9294592179471,9.72048067396211,8.57262013659322,11.1364907510551,8.4964538222437,7.43881101528023,11.2555055053133,10.2395828900516,3.10669656543463,1.12738587736838,13.3069725979141,15.3876396125101,15.5560950675238,19.3739735216597,15.0370951686793,9.03650737572305,3.6457227756306,3.56521771047417,1.20792060413003,1.15212002503146,0.632022241256357,9.52808511863772,8.42229848751584,5.45667456506739,3.58053391334963,1.19208812868759,1.20195449519969,2.51072196196781,1.61546319917036,1.600342939755,0.806609481094724,0.584747284438515,1.05833025804362,1.16876902181569,2.94749498699775,5.77163478772568,9.50966880060442,10.744615447301,5.9888774149979,8.25802891985201,10.4396425832341,5.14484109789758,7.02200945649509,0,0.460325236507177,0.572895513439397,0.515559547031063,0,2.2661816921691,0,0,0,0.51776031175182,10.7938841487544,4.78829848081237,10.9269507682646,6.56388136084394,8.80375283037526,8.27295788025063,6.66740183404846,5.76898160268904,6.73930340142812,7.83361356467772,7.09742039692671,6.97917463128482,6.55490552289177,6.53056554529667,6.20303064720623,6.19181798667996,6.95305955669133,6.36600427530227,5.76920261124629,6.18235464564469,3.77156177623957,6.56660482789549,6.91464950847231,6.83128158171944,7.15231291156513,7.95377314181759,7.13419094203813,5.78753365163254,4.88894809845102,7.85599180320834,5.93175090620871,6.10727790728493,5.72923460437565,5.57772628269478,5.40138510747196,6.49507502638659,8.65546951248011,4.51229213501426,5.54736162999646,6.17655973534643,4.63735671240843
|phase1_expression=7.8472935081349,121.443441858498,121.939796156396,49.3016664430133,64.6155491630788,18.1309613664841,13.5495331545405,0.774739940649458,1.40788722151667,1.17032263160997,0,0.319088635981346,0.342401459862411,0.34968160967599,0.666219523631325,1.61980213911861,0,0.788655413395594,1.23402990245165,0.84877930359606,2.63634199468316,1.58865521921416,0.783599367416806,39.8381132755583,59.6464130774642,134.94451156703,65.4758234161794,85.7575506089838,59.6673537093014,78.1293402255785,60.5324294088982,5.71527606113668,5.53558308826113,0,9.24325183204079,7.97926297720763,7.75843553797003,0.837063261473815,3.1253413780952,1.0470474879476,1.17646297606203,0.683045484958446,0.971020706062307,21.150665419897,19.8698785190249,19.6395024812999,30.5132624295735,8.06693078607652,11.643367684927,7.19390626574849,16.6583841734181,10.062679505548,1.34226084846189,2.17608642603403,0.336093799142464,34.9872833008888,48.1376179097111,20.6268836910977,3.64169629547276,2.64495489636016,5.07065122804943,39.3059657200193,31.1253178638899,4.49949858640699,3.9554654502679,4.9733608046227,10.4860038681442,7.68436610643109,1.24427534770173,2.56511282830212,2.94454945891935,3.99911378165325,3.97563373712904,1.95985278743926,2.87536413054709,4.5960939330501,2.20231761998777,1.91531007127782,1.0752457327937,3.16527090552465,5.48925861614458,2.6045668527838,1.3959149950069,2.8138130501584,1.68078072554491,3.83017161115768,3.70166370077668,3.54158947068071,2.04460721999597,5.7434385681157,4.34796733052517,10.3250865237766,6.79971333707751,17.2705021324101,11.695975514058,4.92829575807069,8.56710962803686,18.2360445158522,16.6263042945836,23.3204119176825,4.08445917352373,3.84979432242953,2.54805239706646,0,12.5564803786504,12.92135313923,11.62706223534,13.8162494460063,0.258937883647172,1.92974780784272,14.2257967948231,9.43842982767638,4.38169444786511,8.74191315205211,6.46737889246376,3.39299796590124,73.1697104493747,2.02439099687876,0.884610551949874,6.79420769779119,2.87093973998512,3.87900202508178,1.86391761218122,0,0.628340120440365,62.0760644156877,1.43778149407104,2.99951365496704,1.77898317902291,1.3481157546434,1.83000241127451,2.01046963380583,0.173824320192276,0,1.87009240103604,1.1356888414743,9.87841829348068,3.98102305952298,2.52722758433675,1.89397670297827,11.4505989807179,12.644615743841,9.36323074987816,7.83665052745718,7.0757959117381,6.40568601424249,5.71580519814346,4.13925393182425,7.54487975264948,6.80781888604149,5.27853372491847,7.23345917010997,5.83899223373756,7.3132954969655,6.99659263787008,12.7381930763836,2.80885274925294,1.28673953557358,1.13665399758237,8.90640821902658,8.67746421930056,5.04173772090842,4.97163944728941,6.49321964766433,6.17068451549513,7.90615412151387,3.75582761959467,4.2035523252181,5.75959474697182,6.23836363500562,7.1340552400353,5.84799949701329,4.39100230582101,7.64976586934119,0.210289948564127,2.26390147234426,63.4404063328892,33.056320832943,10.8777007772969,12.5407802804637,10.0516619831233,9.88249270654378,13.787438718382,17.690983228468,67.3831267393206,23.0578536613615,16.0854533632172,11.5394753783867,11.307917052909,52.1315257019448,81.4840448027597,68.902880546011,11.3800740571849,10.967857210534,7.88954149711563,7.94240178596726,8.53390943537553,8.13575510727695,6.9560190836683,4.42830443938806,3.29697328466887,5.67626954040282,18.3800628794032,7.34118465150814,8.45203678986773,8.31989815823959,8.92584534109413,10.1294407096015,12.2220408855082,13.2340223227373,9.07957269940198,19.2192989231657,1.43768206527355,7.81495990103857,8.11297950097858,8.08252409430758,17.0427542845817,13.9908621195376,2.95605104266567,11.9379589415405,4.72598431681875,5.60158783058121,7.04070744865506,5.19269398069629,5.47500374037832,8.97614780145875,4.57141917907954,5.75808193086815,3.82691444777969,5.73521601505083,3.7990696010497,4.33947175744535,0,1.08781136763742,2.95058563811422,4.69092468718045,1.9266070798535,2.10981035865966,18.196778936811,3.02965112645248,9.14973836307144,12.4940398174924,3.87762115919038,4.77937595905104,7.12955757063661,4.52922449262132,5.66734982344852,11.3979784585412,7.90575555893047,0.321321316421807,10.2196861349953,12.1084610493734,11.2392001953967,5.60898418106621,22.5666735177937,11.6534705354391,16.9301191900261,33.383099116794,46.3623971822813,31.6658202382245,17.0562673491026,13.8142817201452,16.3988794056972,28.7593449721593,33.7339547439996,29.9093075419742,2.38307724027652,10.8036656418786,9.05510786479281,10.7168517515796,9.3990323830405,8.02659679209317,7.89835298890181,11.8741330154694,21.1204537257339,19.9122146611991,4.19003956304428,3.2977250588296,5.00539722757307,3.79971427047382,4.53614907211919,3.28281799490123,37.6010279252507,0.556275906031529,2.39219233116994,9.49379592630823,3.70389054739423,3.57900068308913,1.77702496037333,2.0590035588587,0.679913719975421,1.25956307091292,2.3493995546752,5.72802370809068,9.17374381385292,7.9294592179471,9.72048067396211,8.57262013659322,11.1364907510551,8.4964538222437,7.43881101528023,11.2555055053133,10.2395828900516,3.10669656543463,1.12738587736838,13.3069725979141,15.3876396125101,15.5560950675238,19.3739735216597,15.0370951686793,9.03650737572305,3.6457227756306,3.56521771047417,1.20792060413003,1.15212002503146,0.632022241256357,9.52808511863772,8.42229848751584,5.45667456506739,3.58053391334963,1.19208812868759,1.20195449519969,2.51072196196781,1.61546319917036,1.600342939755,0.806609481094724,0.584747284438515,1.05833025804362,1.16876902181569,2.94749498699775,5.77163478772568,9.50966880060442,10.744615447301,5.9888774149979,8.25802891985201,10.4396425832341,5.14484109789758,7.02200945649509,0,0.460325236507177,0.572895513439397,0.515559547031063,0,2.2661816921691,0,0,0,0.51776031175182,10.7938841487544,4.78829848081237,10.9269507682646,6.56388136084394,8.80375283037526,8.27295788025063,6.66740183404846,5.76898160268904,6.73930340142812,7.83361356467772,7.09742039692671,6.97917463128482,6.55490552289177,6.53056554529667,6.20303064720623,6.19181798667996,6.95305955669133,6.36600427530227,5.76920261124629,6.18235464564469,3.77156177623957,6.56660482789549,6.91464950847231,6.83128158171944,7.15231291156513,7.95377314181759,7.13419094203813,5.78753365163254,4.88894809845102,7.85599180320834,5.93175090620871,6.10727790728493,5.72923460437565,5.57772628269478,5.40138510747196,6.49507502638659,8.65546951248011,4.51229213501426,5.54736162999646,6.17655973534643,4.63735671240843
|short_description=p3@Dnpep
|short_description=p3@Dnpep
}}
}}

Revision as of 07:23, 19 April 2012

Short description:p3@Dnpep
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Dnpep_5end
Coexpression cluster:NA
Association with transcript: 10bp_to_ENSMUST00000171858_5end
EntrezGene:Dnpep
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Dnpep

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5121.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6121.94
CD326+ enterocyte, pool1.CNhs13542.11848-124I349.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I464.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D139.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D259.65
GP2+ M cell, pool1.CNhs13228.11845-124H9134.94
GP2+ M cell, pool2.CNhs13231.11846-124I165.48
GP2+ M cell, pool3.CNhs13240.11847-124I285.76
Ileum epithelium, pool1.CNhs13199.10252-104B959.67
Ileum epithelium, pool2.CNhs13232.10253-104C178.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C860.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D821.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.87
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B319.64
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B730.51
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.64
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C134.99
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E148.14
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C520.63
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C639.31
Mouse Meningeal cells, donor3.CNhs12109.11639-122D131.13
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.97
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.57
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.94
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.17
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.49
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D92.04
Mouse Schwann, donor2.CNhs12573.11746-123F95.74
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F710.33
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.27
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I718.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I823.32
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G112.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.92
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.82
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C514.23
adrenal gland, embryo E16.CNhs11004.1254-43D69.44
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C16.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.39
amnion, adult pregnant day17.5.CNhs10488.583-22A873.17
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.79
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H762.08
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F12.01
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.98
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C611.45
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C67.08
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G85.72
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E27.54
forelimb, embryo E12.CNhs10600.359-14H26.81
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I612.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.29
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I95.04
heart, embryo E14.CNhs10597.403-26D44.97
heart, embryo E15.CNhs11017.431-16C86.49
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E57.91
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E34.20
heart, neonate N03.CNhs11221.1349-25I25.76
heart, neonate N10.CNhs11118.749-24G16.24
heart, neonate N16.CNhs11209.782-15G17.13
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I363.44
intestine, adult.CNhs10496.178-9A333.06
intestine, embryo E12.CNhs11019.1251-16I510.88
intestine, embryo E13.CNhs11010.381-16D512.54
intestine, embryo E15.CNhs10602.976-16D810.05
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D313.79
intestine, embryo E18.CNhs10526.1289-20F717.69
intestine, neonate N00.CNhs11126.644-26D167.38
intestine, neonate N01.CNhs11192.1322-23E923.06
intestine, neonate N06.CNhs11102.688-20B816.09
intestine, neonate N07.CNhs11095.720-20F211.54
intestine, neonate N10.CNhs11098.755-23A511.31
intestine, neonate N20.CNhs11187.827-18D152.13
intestine, neonate N25.CNhs11121.1352-25E381.48
intestine, neonate N30.CNhs11131.1384-42G168.90
kidney, embryo E14.CNhs10606.411-4I911.38
kidney, embryo E15.CNhs10997.434-16F810.97
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I27.94
kidney, embryo E18.CNhs11001.1288-20C78.53
kidney, neonate N00.CNhs11214.646-21G78.14
kidney, neonate N10.CNhs11206.758-6D56.96
kidney, neonate N20.CNhs11113.832-19I14.43
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H15.68
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H68.45
liver, embryo E14.CNhs10594.409-16E18.32
liver, embryo E15.CNhs10520.433-16D78.93
liver, embryo E16.CNhs10523.462-17F510.13
liver, embryo E17.CNhs10510.481-18A312.22
liver, embryo E18.CNhs10579.499-43G413.23
liver, neonate N00.CNhs11117.641-24F49.08
liver, neonate N03.CNhs11123.1345-25G219.22
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A38.08
liver, neonate N25.CNhs11198.1368-26H117.04
liver, neonate N30.CNhs11106.1382-42D113.99
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G211.94
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B67.04
lung, embryo E17.CNhs10605.480-44A65.19
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A35.76
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C718.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E19.15
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D511.40
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.91
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I710.22
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I411.24
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F411.65
pancreas, embryo E15.CNhs11042.1556-45F216.93
pancreas, embryo E16.CNhs11003.460-26E533.38
pancreas, embryo E17.CNhs10599.1558-45G346.36
pancreas, embryo E18.CNhs10580.1535-43I731.67
pancreas, neonate N00.CNhs11105.645-26G917.06
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D816.40
pancreas, neonate N16.CNhs11136.787-43B628.76
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H529.91
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E610.80
pituitary gland, embryo E13.CNhs11009.370-44C79.06
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F57.90
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I721.12
placenta, adult pregnant day17.CNhs10464.577-18G319.91
prostate, adult.CNhs10470.859-1F84.19
skin, adult.CNhs10492.30-1C33.30
skin, neonate N00.CNhs11124.650-25G45.01
skin, neonate N03.CNhs11215.662-22H33.80
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I137.60
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.39
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D13.58
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E39.17
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C611.14
stomach, neonate N03.CNhs11193.1340-24B88.50
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E411.26
stomach, neonate N30.CNhs11134.1386-42I110.24
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F513.31
testis, embryo E15.CNhs11034.443-27C515.39
testis, embryo E16.CNhs11033.470-26G515.56
testis, embryo E17.CNhs11029.486-18I519.37
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B79.04
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.57
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I28.42
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C41.62
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G21.17
tongue, adult.CNhs10499.32-1B42.95
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F58.26
uterus, adult.CNhs10509.92-27E510.44
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I810.79
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H210.93
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.98
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.37
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.13
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F95.40
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:75313521..75313557,-&oldid=1042914"