Personal tools

FFCP PHASE1:Mm9::chrX:7418926..7418992,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:7418926..7418992,+
|short_description=p2@Otud5
|description=CAGE_peak_2_at_Otud5_5end
|association_with_transcript=0bp_to_ENSMUST00000033494,ENSMUST00000115666,NM_138604,uc009smt.1,uc009smu.1_5end
|EntrezGene=54644
|EntrezGene=54644
|HGNC=
|HGNC=
|UniProt=Q3U2S4,A2AES5
|UniProt=Q3U2S4,A2AES5
|association_with_transcript=0bp_to_ENSMUST00000033494,ENSMUST00000115666,NM_138604,uc009smt.1,uc009smu.1_5end
|description=CAGE_peak_2_at_Otud5_5end
|id=chrX:7418926..7418992,+
|ontology_enrichment_disease=
|phase1_expression=6.72625157840135,17.7977457896074,21.3849642513082,17.5429242557961,17.5313505481222,9.9048770428015,8.64366770203445,50.0998494953316,23.3709278771767,21.5339364216234,10.2730780935303,8.37607669451032,40.9169744535582,48.2560621352866,60.292866888635,89.2915929189132,139.212813747501,26.6565529727711,22.0754238105239,24.6145998042858,6.88850650223665,11.5177503393027,9.66439219814061,14.5593104742,11.6998733344257,19.5238867799107,11.1998119001359,15.9448712187558,14.8218267175972,12.0974462284767,9.5344119581781,6.98533740805594,12.3012957516914,0,6.35473563452804,7.31432439577366,7.9626048942324,67.802124179379,40.6294379152376,47.1171369576418,89.9994176687452,66.9384575259277,58.7467527167696,10.3235390739973,10.9487085717076,9.17733760808408,5.47673941043627,4.36050312760893,6.81027166476863,5.24960727500565,6.57936181639204,5.75010257459886,33.5565212115473,47.1485392307374,32.9371923159615,8.48956138918625,9.74213695791773,6.70373719960675,2.42779753031517,3.70293685490423,0.633831403506179,8.4711133017283,8.89294796111139,26.5470416598013,28.6771245144423,24.1563239081674,12.2836045312546,14.6002956022191,2.69592992002042,5.13022565660425,4.41682418837902,3.14216082844184,2.87129103237098,3.79721477566358,3.92966431174769,6.43453150627015,2.20231761998777,3.95830748064082,3.37934373163736,3.56092976871523,3.65950574409639,4.68822033501084,5.58365998002762,4.50210088025344,5.19514042441154,2.35702868378934,2.70506193518296,3.72798891650601,3.93776205332557,4.6854367266207,13.6236309689789,14.6272059086836,12.9194553404473,12.9528765993076,8.4470934268197,11.6486990645307,10.9546647702766,4.60161870960756,7.27400812888033,6.71345191569646,4.78867627240714,5.13305909657271,7.64415719119937,7.11066703153331,10.8245520505607,11.1478340809043,14.1546844604139,8.90634261808668,5.17875767294343,6.97678053604676,5.03107447621794,4.56698217468212,6.22661842591358,7.08396410597326,10.1126288136706,6.53466274914312,24.7194967734374,5.06097749219691,61.9227386364912,11.9707468961083,34.4512768798214,30.547140947519,7.45567044872489,4.39171195517321,7.95897485891129,14.5610521468897,12.3409578241098,7.19883277192089,11.1821799824297,4.34392854273986,4.11750542536764,6.03140890141749,4.34560800480691,3.3243009452943,3.32460871295296,5.51620294430376,6.72139801412087,30.1064868876425,15.1633655060205,11.1534183619831,4.94457683258274,4.13823787980251,3.06105620669094,4.67184935290717,5.8511389270142,4.09963904911519,5.80950692270319,6.46758426847539,3.44908788692548,3.21480336285293,4.75068035242662,5.2606975782618,5.83899223373756,7.66154766348766,9.4659782747654,6.96619933864726,7.02213187313235,5.66165395652373,7.672414483681,7.04227626620706,5.39409937956521,3.06105504483725,3.78791576936336,3.14822770795846,5.09081472528348,5.11574678450897,5.633741429392,8.05680862333469,5.43047504714485,3.2833492815819,7.37726166867287,8.04099930839328,6.58650345873152,6.57611451925822,2.3131894342054,4.01327988279209,26.10308385572,10.0491215332147,6.61193576659225,3.0190767341857,4.38149368495117,3.83198696784351,7.11609740303585,9.51128130562796,10.9141684155238,9.22314146454461,13.8234364840148,11.5394753783867,16.182019230887,12.5834717211591,14.4812493416045,15.3338780405863,5.12103332573321,5.02693455482807,4.50830942692322,4.88763186828754,4.46090720485539,7.85521182771568,8.03104021478068,6.05201606716369,7.06494275286187,9.25478729413504,7.41131567717872,15.5165948315967,20.6386944868863,20.2375901146368,26.7775360232824,35.2118653238529,31.8282314726775,30.2080944323351,29.5086112730564,15.1008777253445,14.3768206527355,10.7920874823866,7.48890415474945,8.84026072814891,6.99649912735457,10.1313139486307,16.2582807346612,2.65287976478679,4.07412441105065,4.41337223015489,7.51008794523207,8.37531287209079,14.2826184531608,16.5863600679129,8.98520321405289,11.7376285513851,11.4807433433391,16.2224681568581,15.8870183316624,18.659728557015,22.6186925908908,28.2830955585729,11.8023425524569,7.45029215022778,3.69266356971921,5.50894926983355,4.26230857979356,4.54447668967871,5.36363973007636,3.51394869866975,6.03185513651837,6.4521575447189,4.45597348164788,5.37845408498782,6.07216052512342,5.55286130031493,5.92931666919785,3.85585579706168,8.65834519770439,8.01295216502649,10.5876523579824,9.89820737835213,18.5843193675948,4.85561272309963,6.04647113929502,6.97838795096823,5.31543407185391,8.60818414242997,11.62927319257,7.63420831902762,8.19943970284859,9.7971394960103,7.37930260024991,20.6271086496374,8.5109901438447,4.68158844481407,7.89087971074802,5.78709994585299,6.20690817747958,7.31312152168489,7.73380396829969,11.5696680663548,22.5284839741162,39.4007651806706,12.1290618930229,11.3771514529621,12.4327608555847,9.04693873922338,15.5184047204077,19.2044852701722,11.659233465194,5.37733375830478,53.8243274513236,9.49379592630823,22.9641213938442,92.8656493033127,64.5196754843239,89.6810438969569,16.9978429993855,17.9137858974282,24.8759952847963,10.5013767981662,4.4287039101359,6.09958401380546,5.72428306355547,7.73626695253534,9.82631536857799,8.09186078308924,11.819444168723,9.42321391142507,11.5357326229696,9.32008969630389,3.38215763210514,5.38259565758324,4.46737924234164,9.52810822885833,4.90807329215378,4.56181538825101,10.3274370008263,10.1559420178281,11.8491059201053,5.31485065817213,6.91272015018877,17.696622755178,6.08175645870493,6.7789231728786,7.53540773271211,10.2045216530464,13.1129694155635,14.7840402909562,12.7012993370136,14.2362694426888,17.07032469072,15.0231015853892,17.1525870101964,19.7234275362675,24.7779032624926,10.8830584135301,20.422707710414,37.2312504929324,22.8323078255147,11.3981860478992,11.6363134779733,12.6374620744413,19.7218908752741,19.0597399533438,3.3885110557024,4.60325236507177,2.86447756719698,4.29632955859219,1.37016503954128,1.5107877947794,1.35004500046361,4.05289082901798,3.17199686288943,2.5888015587591,1.86817225651518,5.1873233542134,7.34154504742777,7.53630822911712,6.07878171621149,4.59608771125035,5.33392146723877,8.24140228955577,6.4183841918363,7.83361356467772,7.85785829659743,6.60192194851267,6.18033949301224,6.33849008808206,6.43277252302869,6.66811167796303,6.95305955669133,7.90927803901191,5.35711671044299,3.67997300335993,6.17164654293748,6.38912902173615,6.19934093863034,6.1045494985578,6.96409415073447,6.51532480765909,4.39027134894654,6.83981249738391,6.51859746460137,5.05028044491965,7.59264115994714,9.1609168609274,5.72923460437565,6.66228417099654,9.45242393807593,7.74412791607632,9.35726433781634,13.5368764050428,7.84282161482258,10.3677966986172,9.97031693167812
|phase1_expression=6.72625157840135,17.7977457896074,21.3849642513082,17.5429242557961,17.5313505481222,9.9048770428015,8.64366770203445,50.0998494953316,23.3709278771767,21.5339364216234,10.2730780935303,8.37607669451032,40.9169744535582,48.2560621352866,60.292866888635,89.2915929189132,139.212813747501,26.6565529727711,22.0754238105239,24.6145998042858,6.88850650223665,11.5177503393027,9.66439219814061,14.5593104742,11.6998733344257,19.5238867799107,11.1998119001359,15.9448712187558,14.8218267175972,12.0974462284767,9.5344119581781,6.98533740805594,12.3012957516914,0,6.35473563452804,7.31432439577366,7.9626048942324,67.802124179379,40.6294379152376,47.1171369576418,89.9994176687452,66.9384575259277,58.7467527167696,10.3235390739973,10.9487085717076,9.17733760808408,5.47673941043627,4.36050312760893,6.81027166476863,5.24960727500565,6.57936181639204,5.75010257459886,33.5565212115473,47.1485392307374,32.9371923159615,8.48956138918625,9.74213695791773,6.70373719960675,2.42779753031517,3.70293685490423,0.633831403506179,8.4711133017283,8.89294796111139,26.5470416598013,28.6771245144423,24.1563239081674,12.2836045312546,14.6002956022191,2.69592992002042,5.13022565660425,4.41682418837902,3.14216082844184,2.87129103237098,3.79721477566358,3.92966431174769,6.43453150627015,2.20231761998777,3.95830748064082,3.37934373163736,3.56092976871523,3.65950574409639,4.68822033501084,5.58365998002762,4.50210088025344,5.19514042441154,2.35702868378934,2.70506193518296,3.72798891650601,3.93776205332557,4.6854367266207,13.6236309689789,14.6272059086836,12.9194553404473,12.9528765993076,8.4470934268197,11.6486990645307,10.9546647702766,4.60161870960756,7.27400812888033,6.71345191569646,4.78867627240714,5.13305909657271,7.64415719119937,7.11066703153331,10.8245520505607,11.1478340809043,14.1546844604139,8.90634261808668,5.17875767294343,6.97678053604676,5.03107447621794,4.56698217468212,6.22661842591358,7.08396410597326,10.1126288136706,6.53466274914312,24.7194967734374,5.06097749219691,61.9227386364912,11.9707468961083,34.4512768798214,30.547140947519,7.45567044872489,4.39171195517321,7.95897485891129,14.5610521468897,12.3409578241098,7.19883277192089,11.1821799824297,4.34392854273986,4.11750542536764,6.03140890141749,4.34560800480691,3.3243009452943,3.32460871295296,5.51620294430376,6.72139801412087,30.1064868876425,15.1633655060205,11.1534183619831,4.94457683258274,4.13823787980251,3.06105620669094,4.67184935290717,5.8511389270142,4.09963904911519,5.80950692270319,6.46758426847539,3.44908788692548,3.21480336285293,4.75068035242662,5.2606975782618,5.83899223373756,7.66154766348766,9.4659782747654,6.96619933864726,7.02213187313235,5.66165395652373,7.672414483681,7.04227626620706,5.39409937956521,3.06105504483725,3.78791576936336,3.14822770795846,5.09081472528348,5.11574678450897,5.633741429392,8.05680862333469,5.43047504714485,3.2833492815819,7.37726166867287,8.04099930839328,6.58650345873152,6.57611451925822,2.3131894342054,4.01327988279209,26.10308385572,10.0491215332147,6.61193576659225,3.0190767341857,4.38149368495117,3.83198696784351,7.11609740303585,9.51128130562796,10.9141684155238,9.22314146454461,13.8234364840148,11.5394753783867,16.182019230887,12.5834717211591,14.4812493416045,15.3338780405863,5.12103332573321,5.02693455482807,4.50830942692322,4.88763186828754,4.46090720485539,7.85521182771568,8.03104021478068,6.05201606716369,7.06494275286187,9.25478729413504,7.41131567717872,15.5165948315967,20.6386944868863,20.2375901146368,26.7775360232824,35.2118653238529,31.8282314726775,30.2080944323351,29.5086112730564,15.1008777253445,14.3768206527355,10.7920874823866,7.48890415474945,8.84026072814891,6.99649912735457,10.1313139486307,16.2582807346612,2.65287976478679,4.07412441105065,4.41337223015489,7.51008794523207,8.37531287209079,14.2826184531608,16.5863600679129,8.98520321405289,11.7376285513851,11.4807433433391,16.2224681568581,15.8870183316624,18.659728557015,22.6186925908908,28.2830955585729,11.8023425524569,7.45029215022778,3.69266356971921,5.50894926983355,4.26230857979356,4.54447668967871,5.36363973007636,3.51394869866975,6.03185513651837,6.4521575447189,4.45597348164788,5.37845408498782,6.07216052512342,5.55286130031493,5.92931666919785,3.85585579706168,8.65834519770439,8.01295216502649,10.5876523579824,9.89820737835213,18.5843193675948,4.85561272309963,6.04647113929502,6.97838795096823,5.31543407185391,8.60818414242997,11.62927319257,7.63420831902762,8.19943970284859,9.7971394960103,7.37930260024991,20.6271086496374,8.5109901438447,4.68158844481407,7.89087971074802,5.78709994585299,6.20690817747958,7.31312152168489,7.73380396829969,11.5696680663548,22.5284839741162,39.4007651806706,12.1290618930229,11.3771514529621,12.4327608555847,9.04693873922338,15.5184047204077,19.2044852701722,11.659233465194,5.37733375830478,53.8243274513236,9.49379592630823,22.9641213938442,92.8656493033127,64.5196754843239,89.6810438969569,16.9978429993855,17.9137858974282,24.8759952847963,10.5013767981662,4.4287039101359,6.09958401380546,5.72428306355547,7.73626695253534,9.82631536857799,8.09186078308924,11.819444168723,9.42321391142507,11.5357326229696,9.32008969630389,3.38215763210514,5.38259565758324,4.46737924234164,9.52810822885833,4.90807329215378,4.56181538825101,10.3274370008263,10.1559420178281,11.8491059201053,5.31485065817213,6.91272015018877,17.696622755178,6.08175645870493,6.7789231728786,7.53540773271211,10.2045216530464,13.1129694155635,14.7840402909562,12.7012993370136,14.2362694426888,17.07032469072,15.0231015853892,17.1525870101964,19.7234275362675,24.7779032624926,10.8830584135301,20.422707710414,37.2312504929324,22.8323078255147,11.3981860478992,11.6363134779733,12.6374620744413,19.7218908752741,19.0597399533438,3.3885110557024,4.60325236507177,2.86447756719698,4.29632955859219,1.37016503954128,1.5107877947794,1.35004500046361,4.05289082901798,3.17199686288943,2.5888015587591,1.86817225651518,5.1873233542134,7.34154504742777,7.53630822911712,6.07878171621149,4.59608771125035,5.33392146723877,8.24140228955577,6.4183841918363,7.83361356467772,7.85785829659743,6.60192194851267,6.18033949301224,6.33849008808206,6.43277252302869,6.66811167796303,6.95305955669133,7.90927803901191,5.35711671044299,3.67997300335993,6.17164654293748,6.38912902173615,6.19934093863034,6.1045494985578,6.96409415073447,6.51532480765909,4.39027134894654,6.83981249738391,6.51859746460137,5.05028044491965,7.59264115994714,9.1609168609274,5.72923460437565,6.66228417099654,9.45242393807593,7.74412791607632,9.35726433781634,13.5368764050428,7.84282161482258,10.3677966986172,9.97031693167812
|short_description=p2@Otud5
}}
}}

Revision as of 05:02, 19 April 2012

Short description:p2@Otud5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Otud5_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000033494, ENSMUST00000115666, NM_138604, uc009smt.1, uc009smu.1_5end
EntrezGene:Otud5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Otud5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.73
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I517.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I621.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I317.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E950.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E723.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F221.53
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.27
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.38
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E440.92
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E848.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A160.29
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A389.29
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5139.21
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A226.66
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A422.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.70
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I215.94
Ileum epithelium, pool1.CNhs13199.10252-104B914.82
Ileum epithelium, pool2.CNhs13232.10253-104C112.10
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.96
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G867.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H140.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H347.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G990.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H266.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H458.75
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.58
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I947.15
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.94
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.49
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C726.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E728.68
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.16
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E814.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.73
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F94.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.92
Mouse hepatocyte, donor3.CNhs12615.11637-122C812.95
Mouse hepatocyte, donor6.CNhs13090.11822-124F48.45
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.82
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G211.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D76.98
adrenal gland, embryo E14.CNhs11038.406-44C55.03
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F57.08
adrenal gland, neonate N00.CNhs11191.1311-23C110.11
adrenal gland, neonate N25.CNhs11223.1377-27I36.53
amnion, adult pregnant day17.5.CNhs10488.583-22A824.72
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G261.92
bone (os femoris), neonate N02.CNhs11227.1985-43F511.97
bone (os femoris), neonate N16.CNhs11225.1525-43A634.45
bone (os femoris), neonate N20.CNhs11195.1350-25C330.55
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H714.56
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.18
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.72
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.11
epididymis, adult.CNhs10490.58-23B215.16
eyeball, adult.CNhs10484.31-12G411.15
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.85
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G85.81
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B59.47
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.02
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.67
heart, embryo E11.CNhs10586.331-24E97.04
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I93.06
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C65.09
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G35.63
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I25.43
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G17.38
heart, neonate N20.CNhs11127.821-26I68.04
heart, neonate N25.CNhs11196.1351-25D36.59
heart, neonate N30.CNhs11202.1390-42D26.58
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G14.01
intestinal mucosa, adult.CNhs10506.860-29I326.10
intestine, adult.CNhs10496.178-9A310.05
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D84.38
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D37.12
intestine, embryo E18.CNhs10526.1289-20F79.51
intestine, neonate N00.CNhs11126.644-26D110.91
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B813.82
intestine, neonate N07.CNhs11095.720-20F211.54
intestine, neonate N10.CNhs11098.755-23A516.18
intestine, neonate N20.CNhs11187.827-18D112.58
intestine, neonate N25.CNhs11121.1352-25E314.48
intestine, neonate N30.CNhs11131.1384-42G115.33
kidney, embryo E14.CNhs10606.411-4I95.12
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I24.89
kidney, embryo E18.CNhs11001.1288-20C74.46
kidney, neonate N00.CNhs11214.646-21G77.86
kidney, neonate N10.CNhs11206.758-6D58.03
kidney, neonate N20.CNhs11113.832-19I16.05
kidney, neonate N25.CNhs11122.1353-25F37.06
kidney, neonate N30.CNhs11203.1385-42H19.25
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F815.52
liver, embryo E13.CNhs10524.378-3H620.64
liver, embryo E14.CNhs10594.409-16E120.24
liver, embryo E15.CNhs10520.433-16D726.78
liver, embryo E16.CNhs10523.462-17F535.21
liver, embryo E17.CNhs10510.481-18A331.83
liver, embryo E18.CNhs10579.499-43G430.21
liver, neonate N00.CNhs11117.641-24F429.51
liver, neonate N03.CNhs11123.1345-25G215.10
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B97.49
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D110.13
lung, adult.CNhs10474.28-22B116.26
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A68.38
lung, embryo E18.CNhs10583.1287-20I614.28
lung, neonate N00.CNhs11224.640-42C616.59
lung, neonate N06.CNhs11212.683-20E58.99
lung, neonate N07.CNhs11111.715-19A311.74
lung, neonate N10.CNhs11219.750-23E611.48
lung, neonate N20.CNhs11109.822-18A416.22
lung, neonate N25.CNhs11119.1359-25C715.89
lung, neonate N30.CNhs11133.1394-42H218.66
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A128.28
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H27.45
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A35.51
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.45
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.46
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I78.66
ovary, embryo E18.CNhs11040.505-44H78.01
ovary, neonate N00.CNhs11217.1299-22I410.59
oviduct, adult pregnant day01.CNhs10500.988-6G69.90
pancreas, adult.CNhs10486.34-16E418.58
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E56.98
pancreas, embryo E17.CNhs10599.1558-45G35.32
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B69.80
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H520.63
pituitary gland, adult.CNhs10493.21-1G88.51
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C77.89
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F67.31
pituitary gland, embryo E17.CNhs11039.1265-44F57.73
pituitary gland, neonate N00.CNhs11190.1308-22E911.57
placenta, adult pregnant day10.CNhs10472.539-13I722.53
placenta, adult pregnant day17.CNhs10464.577-18G339.40
prostate, adult.CNhs10470.859-1F812.13
skin, adult.CNhs10492.30-1C311.38
skin, neonate N00.CNhs11124.650-25G412.43
skin, neonate N03.CNhs11215.662-22H39.05
skin, neonate N06.CNhs11097.693-20I515.52
skin, neonate N10.CNhs11108.762-6C419.20
small intestine, neonate N16.CNhs11114.790-21I111.66
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G253.82
spleen, embryo E16.CNhs11035.461-43C19.49
spleen, embryo E18.CNhs11011.1271-21F222.96
spleen, neonate N10.CNhs11116.752-24D192.87
spleen, neonate N20.CNhs11112.824-19H164.52
spleen, neonate N25.CNhs11099.1354-25G389.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D324.88
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D45.72
stomach, embryo E17.CNhs11006.1035-18D57.74
stomach, embryo E18.CNhs10999.1286-20C69.83
stomach, neonate N03.CNhs11193.1340-24B88.09
stomach, neonate N07.CNhs11210.718-18A911.82
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I111.54
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F55.38
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I54.91
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I410.16
testis, neonate N10.CNhs11204.763-44D911.85
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B517.70
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I26.78
thymus, embryo E16.CNhs11002.456-26C57.54
thymus, embryo E17.CNhs10581.478-18C110.20
thymus, embryo E18.CNhs10595.1273-19G413.11
thymus, neonate N02.CNhs11181.1541-43F814.78
thymus, neonate N03.CNhs11137.2104-43C712.70
thymus, neonate N06.CNhs11197.681-26C414.24
thymus, neonate N07.CNhs11211.713-19D317.07
thymus, neonate N10.CNhs11194.748-24E415.02
thymus, neonate N20.CNhs11186.820-7A217.15
thymus, neonate N25.CNhs11125.1362-25G719.72
thymus, neonate N30.CNhs11132.1393-42G224.78
tongue, adult.CNhs10499.32-1B410.88
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H320.42
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F737.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.83
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F511.64
uterus, adult.CNhs10509.92-27E512.64
vagina, adult.CNhs10502.89-27D519.72
vesicular gland, adult.CNhs10491.51-27F819.06
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.30
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.87
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.52
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I57.74
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C213.54
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D110.37
whole body, neonate N10.CNhs10518.761-6B49.97





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:7418926..7418992,%2B&oldid=1026280"