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FFCP PHASE1:Mm9::chr7:112782039..112782115,-: Difference between revisions

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|description=CAGE_peak_1_at_Trim3_5end
|description=CAGE_peak_1_at_Trim3_5end
|id=chr7:112782039..112782115,-
|id=chr7:112782039..112782115,-
|ontology_enrichment_celltype=CL:0000055!1.43e-18!50;CL:0002319!5.27e-17!43;CL:0000221!1.39e-16!44;CL:0000133!1.39e-16!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!3.06e-13!33;CL:0000047!3.06e-13!33;CL:0000031!3.06e-13!33;CL:0000404!3.06e-13!33;CL:0000117!2.11e-12!23;CL:0000337!2.11e-12!23;CL:0002321!9.95e-09!70;CL:0000220!9.95e-09!70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=8.96833543786846,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,3.02182689441402,2.10251376535973,2.1950964985068,2.39340827657833,1.40438715793196,1.54096171402954,2.71225340584144,3.25281386869291,1.31130603628496,2.6648780945253,2.63217847606774,2.79824751251259,3.62781490161973,4.38766187538364,3.81950686618227,16.0731818385522,3.3758923408301,3.39559725880616,0.799962113967033,2.52350209173887,1.14846392823004,0.430761996159075,1.72376986148711,0.950117097281869,1.51218077855958,0.886922042621219,2.54012269383853,4.30545351309199,0,0.577703239502549,1.49611180822643,1.83752420636132,3.76678467663217,1.5626706890476,2.09409497589519,5.88231488031014,0.683045484958446,1.94204141212461,16.4924831548006,18.6533553443907,11.7469921383476,52.4202200713186,19.8402892306206,20.8701873597748,18.2764105129826,29.9570942278276,23.0004102983955,3.85899993932794,0,1.68046899571232,20.3234954468398,20.057340795713,25.2679325215947,28.3243045203437,37.5583595283143,27.2547503507657,36.2563649313971,33.7932022522233,27.8968912357234,13.8441290759376,24.1563239081674,28.4620104992484,20.3635701820424,21.3600601355464,19.9808788730902,19.3498964443271,48.5606673486466,43.0693654855646,17.2712026893085,19.3607851456837,22.0612508786405,28.6301290598411,43.541382287049,38.7088463805734,34.02666223439,33.4844775584819,30.7338888628488,40.4815348552002,36.5795696520592,33.6156145108982,35.0608016713665,37.7284954117623,37.0934897192348,21.4305127132911,17.2303157043471,23.1891590961342,15.487629785665,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,5.89866564553358,17.0430322578058,11.4305842025262,12.7202246823722,9.43650912503759,29.5150898052931,33.1246811618639,49.7746692207332,8.87613268145978,6.58735650235256,7.07734223020697,4.90990682791958,5.95557132388495,8.16431764856536,9.54169297213747,6.69824052286711,6.22661842591358,6.17962826265753,10.9357497636205,7.91699525376955,14.5845030963281,13.158541479712,8.84610551949874,10.0295446967394,8.61281921995535,7.75800405016355,0,67.0468025156443,84.4070228458224,3.0654846625031,1.7972268675888,2.99951365496704,1.90605340609597,25.7639899776295,34.7700458142156,34.303638126812,31.462201954802,36.3115949409069,29.298114282898,30.5013574567384,15.9887801244997,7.83763914843586,9.35074206204597,9.25944165900485,7.41686524887411,11.4951052216736,9.18316862007281,13.7141384230501,16.600905792924,14.2206229516183,19.3962569838639,15.0047955028629,6.03590380211958,9.45530400839096,11.6127741948206,10.9597866213787,11.6779844674751,11.8405736617537,11.5237996388448,9.15557627365069,2.1066395619397,2.57347907114715,3.9782889915383,7.87077935634907,6.56672967947069,9.00310307305074,8.99629995223799,11.0187969778546,10.0273623376796,9.76642567951713,13.413670069981,14.2453717687947,12.5065485934245,11.8200574136949,13.3763535750662,13.8889988054066,14.0512073786272,14.3600868073598,28.3891430561572,29.9452422023718,1.32167513193519,2.64450566663544,7.25180051819795,9.28946687441754,9.92279452180119,6.6555563125703,6.67134131534611,6.08722003560189,3.79623249235609,6.25856027951241,8.29406189040889,6.96347652144028,8.57841983324129,8.08937467788799,3.8904848977445,4.97853183135918,6.63837653335786,8.91138398355885,6.76246414038483,11.2008230314923,9.11576689687841,13.8167565183928,15.3032419840703,10.775540802511,10.9899109488962,11.9695249004147,4.15033677922008,2.00214126859313,4.12773889737726,2.47348323623339,1.42002084971952,4.10001171579109,5.0925170356284,6.32931502391783,4.86405680325106,4.66754402419738,4.31304619582064,5.58211421502755,4.05648975048929,5.55673531483646,4.66433275156972,9.64887042726734,28.2672380954905,10.2325362356062,13.2001630918041,11.712410918488,13.1426539041561,26.9685074481323,29.7554551107517,43.1245361765735,32.6304748299815,33.441168136965,36.5151420225645,26.5458569839496,31.428666699593,41.0803326371493,16.5870412333199,21.7562273527484,4.91764273019036,9.10591262805617,28.578005017827,29.7717683944196,8.36068221421045,12.876017287423,17.0374438484779,15.2271110275689,12.4945570685023,14.3381278771531,15.5959071857676,20.0984336860071,16.5972387686707,23.380468632905,22.5314033429518,22.8138134659483,10.5035663054119,16.3820355373875,16.7773568134183,15.3422214364458,1.32745138339963,5.82673526771955,7.86041248108353,6.41257271170054,10.9261700365886,9.53048958626175,8.01127708821486,8.72480950746013,9.9819265947722,6.95280867458795,10.5418608574999,10.3135543248187,12.9367050186439,10.0834212657534,10.0899773350549,8.78781843629528,9.22169214939823,11.4156043265325,13.8221177305782,15.22324745573,9.85621173867584,10.591603543191,11.0264199027481,13.1909002353184,14.3703339759356,9.71038091343309,8.8335534562321,8.53532678674319,6.41257840585672,32.4494278518392,3.41741761595705,9.28740905834501,6.2966139305702,2.0720530270516,2.59719032669948,2.97411625168479,2.03974115992626,2.23922323717853,2.76399947608848,10.5013767981662,10.1227517945963,6.09958401380546,8.5324219249223,8.57262013659322,8.29777742235475,9.71023293970709,11.323523434371,9.42321391142507,4.53652406521275,9.94142900939081,1.69107881605257,5.23307911153926,7.94200754194069,10.1114617938905,6.84547064431975,9.63049915297436,10.3274370008263,10.8069639420479,9.01790362061113,5.55643477899814,3.74439008135225,1.89606672376907,4.25722952109345,4.62199307241723,1.16928740680016,2.8644271306797,2.58285761215644,1.44234539423963,1.62458479892035,1.00966449948148,2.057583779685,0.907435666231565,2.24153125701431,1.44317762460494,1.75315353272353,11.5632495643758,10.433339808581,6.72853924571068,7.72269235274761,14.8755987404787,12.9500908061316,10.4396425832341,8.1459984050045,15.0471631210609,35.5793660848752,32.2227665555024,34.9466263198032,35.229902380456,28.0883833105963,33.2373314851468,30.3760125104313,28.8205570063501,33.5325382648311,33.1366599521165,5.29315472679301,15.1629451892392,11.439151585527,10.9398022680732,12.157563432423,14.1559501506511,13.5570503958985,12.9802086060503,16.6877988987744,14.6564382823003,12.9274442944022,16.2218653592026,13.6716600906028,14.8538353579297,13.4973352045691,15.2413981210584,16.4555742841695,14.4681915347779,13.5988347265091,12.217510371155,9.94320831917705,14.5530161050657,11.4449371174714,12.0637525804833,12.516547595239,13.1152642232099,10.426894453748,15.7841826862706,15.3458648645824,16.8342681497322,11.8635018124174,16.7457620038458,18.415396942636,15.3387472774106,13.8892759906422,19.4852250791598,15.439486157397,18.0491685400571,15.4943548975763,12.5737108898124,12.2889952878823
|phase1_expression=8.96833543786846,1.39590163055744,2.27499619694768,1.81478526784098,0.500895729946347,3.02182689441402,2.10251376535973,2.1950964985068,2.39340827657833,1.40438715793196,1.54096171402954,2.71225340584144,3.25281386869291,1.31130603628496,2.6648780945253,2.63217847606774,2.79824751251259,3.62781490161973,4.38766187538364,3.81950686618227,16.0731818385522,3.3758923408301,3.39559725880616,0.799962113967033,2.52350209173887,1.14846392823004,0.430761996159075,1.72376986148711,0.950117097281869,1.51218077855958,0.886922042621219,2.54012269383853,4.30545351309199,0,0.577703239502549,1.49611180822643,1.83752420636132,3.76678467663217,1.5626706890476,2.09409497589519,5.88231488031014,0.683045484958446,1.94204141212461,16.4924831548006,18.6533553443907,11.7469921383476,52.4202200713186,19.8402892306206,20.8701873597748,18.2764105129826,29.9570942278276,23.0004102983955,3.85899993932794,0,1.68046899571232,20.3234954468398,20.057340795713,25.2679325215947,28.3243045203437,37.5583595283143,27.2547503507657,36.2563649313971,33.7932022522233,27.8968912357234,13.8441290759376,24.1563239081674,28.4620104992484,20.3635701820424,21.3600601355464,19.9808788730902,19.3498964443271,48.5606673486466,43.0693654855646,17.2712026893085,19.3607851456837,22.0612508786405,28.6301290598411,43.541382287049,38.7088463805734,34.02666223439,33.4844775584819,30.7338888628488,40.4815348552002,36.5795696520592,33.6156145108982,35.0608016713665,37.7284954117623,37.0934897192348,21.4305127132911,17.2303157043471,23.1891590961342,15.487629785665,1.3599426674155,4.31762553310254,1.94932925234301,3.58421509677868,5.89866564553358,17.0430322578058,11.4305842025262,12.7202246823722,9.43650912503759,29.5150898052931,33.1246811618639,49.7746692207332,8.87613268145978,6.58735650235256,7.07734223020697,4.90990682791958,5.95557132388495,8.16431764856536,9.54169297213747,6.69824052286711,6.22661842591358,6.17962826265753,10.9357497636205,7.91699525376955,14.5845030963281,13.158541479712,8.84610551949874,10.0295446967394,8.61281921995535,7.75800405016355,0,67.0468025156443,84.4070228458224,3.0654846625031,1.7972268675888,2.99951365496704,1.90605340609597,25.7639899776295,34.7700458142156,34.303638126812,31.462201954802,36.3115949409069,29.298114282898,30.5013574567384,15.9887801244997,7.83763914843586,9.35074206204597,9.25944165900485,7.41686524887411,11.4951052216736,9.18316862007281,13.7141384230501,16.600905792924,14.2206229516183,19.3962569838639,15.0047955028629,6.03590380211958,9.45530400839096,11.6127741948206,10.9597866213787,11.6779844674751,11.8405736617537,11.5237996388448,9.15557627365069,2.1066395619397,2.57347907114715,3.9782889915383,7.87077935634907,6.56672967947069,9.00310307305074,8.99629995223799,11.0187969778546,10.0273623376796,9.76642567951713,13.413670069981,14.2453717687947,12.5065485934245,11.8200574136949,13.3763535750662,13.8889988054066,14.0512073786272,14.3600868073598,28.3891430561572,29.9452422023718,1.32167513193519,2.64450566663544,7.25180051819795,9.28946687441754,9.92279452180119,6.6555563125703,6.67134131534611,6.08722003560189,3.79623249235609,6.25856027951241,8.29406189040889,6.96347652144028,8.57841983324129,8.08937467788799,3.8904848977445,4.97853183135918,6.63837653335786,8.91138398355885,6.76246414038483,11.2008230314923,9.11576689687841,13.8167565183928,15.3032419840703,10.775540802511,10.9899109488962,11.9695249004147,4.15033677922008,2.00214126859313,4.12773889737726,2.47348323623339,1.42002084971952,4.10001171579109,5.0925170356284,6.32931502391783,4.86405680325106,4.66754402419738,4.31304619582064,5.58211421502755,4.05648975048929,5.55673531483646,4.66433275156972,9.64887042726734,28.2672380954905,10.2325362356062,13.2001630918041,11.712410918488,13.1426539041561,26.9685074481323,29.7554551107517,43.1245361765735,32.6304748299815,33.441168136965,36.5151420225645,26.5458569839496,31.428666699593,41.0803326371493,16.5870412333199,21.7562273527484,4.91764273019036,9.10591262805617,28.578005017827,29.7717683944196,8.36068221421045,12.876017287423,17.0374438484779,15.2271110275689,12.4945570685023,14.3381278771531,15.5959071857676,20.0984336860071,16.5972387686707,23.380468632905,22.5314033429518,22.8138134659483,10.5035663054119,16.3820355373875,16.7773568134183,15.3422214364458,1.32745138339963,5.82673526771955,7.86041248108353,6.41257271170054,10.9261700365886,9.53048958626175,8.01127708821486,8.72480950746013,9.9819265947722,6.95280867458795,10.5418608574999,10.3135543248187,12.9367050186439,10.0834212657534,10.0899773350549,8.78781843629528,9.22169214939823,11.4156043265325,13.8221177305782,15.22324745573,9.85621173867584,10.591603543191,11.0264199027481,13.1909002353184,14.3703339759356,9.71038091343309,8.8335534562321,8.53532678674319,6.41257840585672,32.4494278518392,3.41741761595705,9.28740905834501,6.2966139305702,2.0720530270516,2.59719032669948,2.97411625168479,2.03974115992626,2.23922323717853,2.76399947608848,10.5013767981662,10.1227517945963,6.09958401380546,8.5324219249223,8.572620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|short_description=p1@Trim3
|short_description=p1@Trim3
}}
}}

Revision as of 02:25, 19 April 2012

Short description:p1@Trim3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000057525, ENSMUST00000106789, ENSMUST00000106792, ENSMUST00000140882, ENSMUST00000153371_5end
EntrezGene:Trim3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.54
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.71
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.25
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.63
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.39
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A316.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.40
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.75
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B752.42
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C219.84
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.87
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C318.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C423.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.06
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.27
Mouse Granule cells, donor1.CNhs12131.11713-123C328.32
Mouse Granule cells, donor2.CNhs12357.11731-123E337.56
Mouse Granule cells, donor3.CNhs12108.11636-122C727.25
Mouse Meningeal cells, donor1.CNhs12132.11716-123C636.26
Mouse Meningeal cells, donor3.CNhs12109.11639-122D133.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C727.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D224.16
Mouse Microglia, donor1.CNhs12629.11718-123C828.46
Mouse Microglia, donor2.CNhs12634.11736-123E820.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.36
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F148.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D543.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D217.27
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.36
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D622.06
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D328.63
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F343.54
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D738.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.03
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F433.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E440.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.62
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.73
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D921.43
Mouse Schwann, donor2.CNhs12573.11746-123F917.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G323.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F715.49
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H129.52
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I833.12
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.08
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.91
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D78.16
adrenal gland, embryo E14.CNhs11038.406-44C59.54
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I16.23
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C110.94
adrenal gland, neonate N25.CNhs11223.1377-27I37.92
amnion, adult pregnant day17.5.CNhs10488.583-22A814.58
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F510.03
bone (os femoris), neonate N16.CNhs11225.1525-43A68.61
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B267.05
cerebellum, neonate N30.CNhs11135.1395-42I284.41
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.91
corpora quadrigemina, adult.CNhs10501.16-22A425.76
corpus striatum, adult.CNhs10487.19-21D834.77
corpus striatum, neonate N00.CNhs11226.630-43F134.30
cortex, adult.CNhs10473.12-14D531.46
cortex, neonate N30.CNhs11107.1392-42F236.31
diencephalon, adult.CNhs10482.20-12F229.30
diencephalon, neonate N30.CNhs11201.1388-42B230.50
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B115.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.84
epididymis, adult.CNhs10490.58-23B29.35
eyeball, adult.CNhs10484.31-12G49.26
eyeball, embryo E12.CNhs11016.345-16C67.42
eyeball, embryo E14.CNhs10521.399-16E211.50
eyeball, embryo E15.CNhs10593.426-16C99.18
eyeball, embryo E17.CNhs11023.1261-18D413.71
eyeball, neonate N00.CNhs11207.633-15C616.60
eyeball, neonate N01.CNhs11140.1532-43E714.22
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A215.00
forelimb, embryo E11.CNhs10596.335-25E26.04
forelimb, embryo E12.CNhs10600.359-14H29.46
forelimb, embryo E13.CNhs10589.384-1E211.61
forelimb, embryo E14.CNhs10577.413-26A810.96
forelimb, embryo E15.CNhs11007.437-20E711.68
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B511.52
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I99.00
heart, embryo E14.CNhs10597.403-26D49.00
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E59.77
heart, embryo E18.CNhs11030.1283-20G313.41
heart, neonate N00.CNhs11213.639-21E314.25
heart, neonate N03.CNhs11221.1349-25I212.51
heart, neonate N10.CNhs11118.749-24G111.82
heart, neonate N16.CNhs11209.782-15G113.38
heart, neonate N20.CNhs11127.821-26I613.89
heart, neonate N25.CNhs11196.1351-25D314.05
heart, neonate N30.CNhs11202.1390-42D214.36
hippocampus, adult.CNhs10478.13-16E828.39
hippocampus, neonate N00.CNhs11228.627-43G129.95
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H46.66
intestine, embryo E17.CNhs10582.482-18D36.67
intestine, embryo E18.CNhs10526.1289-20F76.09
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B88.29
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F88.91
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I211.20
kidney, embryo E18.CNhs11001.1288-20C79.12
kidney, neonate N00.CNhs11214.646-21G713.82
kidney, neonate N10.CNhs11206.758-6D515.30
kidney, neonate N20.CNhs11113.832-19I110.78
kidney, neonate N25.CNhs11122.1353-25F310.99
kidney, neonate N30.CNhs11203.1385-42H111.97
liver, adult pregnant day01.CNhs10466.508-5B24.15
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G46.33
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H14.66
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B128.27
lung, embryo E12.CNhs10522.354-16G210.23
lung, embryo E14.CNhs10604.404-26F813.20
lung, embryo E15.CNhs11020.432-17C511.71
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A626.97
lung, embryo E18.CNhs10583.1287-20I629.76
lung, neonate N00.CNhs11224.640-42C643.12
lung, neonate N06.CNhs11212.683-20E532.63
lung, neonate N07.CNhs11111.715-19A333.44
lung, neonate N10.CNhs11219.750-23E636.52
lung, neonate N20.CNhs11109.822-18A426.55
lung, neonate N25.CNhs11119.1359-25C731.43
lung, neonate N30.CNhs11133.1394-42H241.08
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A116.59
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.76
mammary gland, adult lactating day02.CNhs10480.595-22B64.92
mammary gland, adult pregnant day19.CNhs10476.588-5H29.11
medulla oblongata, adult.CNhs10477.17-12C228.58
medulla oblongata, neonate N30.CNhs11200.1396-42A329.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.36
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.88
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.23
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E312.49
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.34
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.60
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.53
olfactory brain, adult.CNhs10489.18-22I922.81
ovary, adult.CNhs10507.91-2I710.50
ovary, embryo E18.CNhs11040.505-44H716.38
ovary, neonate N00.CNhs11217.1299-22I416.78
oviduct, adult pregnant day01.CNhs10500.988-6G615.34
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E56.41
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G98.01
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H510.31
pituitary gland, adult.CNhs10493.21-1G812.94
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C710.09
pituitary gland, embryo E14.CNhs11037.398-44A58.79
pituitary gland, embryo E15.CNhs10592.427-16B99.22
pituitary gland, embryo E16.CNhs11036.449-43F611.42
pituitary gland, embryo E17.CNhs11039.1265-44F513.82
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I79.86
placenta, adult pregnant day17.CNhs10464.577-18G310.59
prostate, adult.CNhs10470.859-1F811.03
skin, adult.CNhs10492.30-1C313.19
skin, neonate N00.CNhs11124.650-25G414.37
skin, neonate N03.CNhs11215.662-22H39.71
skin, neonate N06.CNhs11097.693-20I58.83
skin, neonate N10.CNhs11108.762-6C48.54
small intestine, neonate N16.CNhs11114.790-21I16.41
spinal cord, adult.CNhs10505.24-13C932.45
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C19.29
spleen, embryo E18.CNhs11011.1271-21F26.30
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G32.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E310.12
stomach, embryo E15.CNhs10603.1252-16G86.10
stomach, embryo E16.CNhs11022.459-17D48.53
stomach, embryo E17.CNhs11006.1035-18D58.57
stomach, embryo E18.CNhs10999.1286-20C68.30
stomach, neonate N03.CNhs11193.1340-24B89.71
stomach, neonate N07.CNhs11210.718-18A911.32
stomach, neonate N25.CNhs11104.1355-25E49.42
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F55.23
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G510.11
testis, embryo E17.CNhs11029.486-18I56.85
testis, embryo E18.CNhs11027.503-18G59.63
testis, neonate N00.CNhs11189.1300-22B710.33
testis, neonate N07.CNhs11222.726-26I410.81
testis, neonate N10.CNhs11204.763-44D99.02
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.75
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H310.43
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F76.73
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E414.88
uterus, adult pregnant day19.CNhs10497.590-15F512.95
uterus, adult.CNhs10509.92-27E510.44
vagina, adult.CNhs10502.89-27D58.15
vesicular gland, adult.CNhs10491.51-27F815.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A135.58
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A232.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A334.95
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.09
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A728.82
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A933.14
whole body, embryo E11.CNhs11014.324-5I85.29
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H211.44
whole body, embryo E14.5.CNhs10578.420-27D210.94
whole body, embryo E14.CNhs10519.395-14B112.16
whole body, embryo E16.CNhs10514.453-14F214.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G513.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.12
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F913.89
whole body, embryo E17.CNhs10517.475-3I519.49
whole body, embryo E18.CNhs10516.493-3B315.44
whole body, neonate N00.CNhs10525.657-19C218.05
whole body, neonate N01.CNhs10576.659-23C615.49
whole body, neonate N06.CNhs10515.692-21D112.57
whole body, neonate N10.CNhs10518.761-6B412.29





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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