FFCP PHASE1:Mm9::chr7:17502981..17502996,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 6: | Line 6: | ||
|description=CAGE_peak_10_at_Calm3_5end,CAGE_peak_11_at_Calm1_5end,CAGE_peak_9_at_Calm2_5end | |description=CAGE_peak_10_at_Calm3_5end,CAGE_peak_11_at_Calm1_5end,CAGE_peak_9_at_Calm2_5end | ||
|id=chr7:17502981..17502996,- | |id=chr7:17502981..17502996,- | ||
|ontology_enrichment_celltype=CL:0000117!3.09e-13!23;CL:0000337!3.09e-13!23;CL:0000055!7.22e-13!50;CL:0002319!7.54e-13!43;CL:0000221!8.57e-13!44;CL:0000133!8.57e-13!44;CL:0000393!1.34e-11!39;CL:0000211!1.34e-11!39;CL:0000540!7.86e-11!33;CL:0000047!7.86e-11!33;CL:0000031!7.86e-11!33;CL:0000404!7.86e-11!33;CL:0002321!1.20e-08!70;CL:0000220!1.20e-08!70;CL:0000723!6.34e-07!91;CL:0000048!6.34e-07!91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0.500895729946347,0.503637815735669,0.934450562382103,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,1.33243904726265,0.404950534779652,1.39912375625629,0.473193248037357,0.411343300817216,0,0.850432901510698,0.397163804803541,0.261199789138935,1.27993938234725,0.91763712426868,0,0,0.646413698057667,3.42042155021473,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,2.3440060335714,1.57057123192139,1.76469446409304,0.683045484958446,0,0.629484089877886,0.405507724878058,0.367093504323363,0.782391344348039,1.74420125104357,1.5378032791413,1.94429899074283,1.95980990275508,0,0,0,0.672187598284928,1.54355661621568,0.573066879877513,1.03134418455488,1.41621522601718,2.64495489636016,2.53532561402472,1.69422266034566,2.66788438833342,0.449949858640699,0.988866362566974,0,2.99600110518405,4.61061966385865,1.03689612308478,2.8351247049655,1.89292465216244,3.42781181284564,5.52171352379034,1.10241719293459,1.15014565221884,0.919218786610021,4.40463523997555,2.29837208553338,3.37934373163736,1.71452174049252,4.48289453651807,1.04182674111352,4.4669279840221,2.25105044012672,3.0559649555362,1.76777151284201,5.97961059356232,2.23679334990361,0.454357159999104,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,1.81850203222008,0.70667914902068,0.422530259330042,1.28326477414318,0,0,0,0,0,0.5709193985953,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0,0.441683036920787,0.484875253135222,3.72783522436244,0.585561594023094,3.14170060220183,1.02182822083437,1.43778149407104,0,0.381210681219194,1.04853447583376,0.457500602818626,0.753926112677186,1.21677024134594,1.02286182932132,0.62336413367868,1.46017136760982,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.468508622798644,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,0.329119699826961,0.656669856316381,0.162137619091711,0.584799949701329,0.439100230582101,0.134206418760372,1.05144974282064,1.02904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,0,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0,0.674586337154561,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0,0.80275294993896,1.28932855251423,0.655739781506702,0.252470927204373,0.631016438832513,0,0,0.477937595905104,1.11399337041197,0.849229592366497,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.258717367565509,0.643011105094777,1.24138163549592,0.356737635204141,0,0.913394847343798,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,0.370850604021019,0.512612642393558,0.206386867963223,0,0.565105371014073,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.552799895217695,0,0.316335993581135,0.203319467126849,0.216010681643603,0.836353184057875,0.218362563746178,0,0.247960367176008,0.523511883968059,0,0.621339313086926,2.25477175473676,0.149516546043979,0,0,0.516639293910924,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,1.44950472495604,1.44015003128933,0.316011120628178,0.810900861160657,0.308132871494482,0.25984164595559,0.179026695667481,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.381034033274999,0.403304740547362,0,0.192423683280659,0,0.226730383615211,0,0.0897138566094757,0.503653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,4.60325236507177,6.30185064783336,3.09335728218638,2.74033007908257,5.2877572817279,4.05013500139084,4.95353323546643,0.906284817968409,4.14208249401456,0.415149390336707,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.114870937911227,0,0.927074607558844,0.192909220463705,0.412085900803307,0.588795680537589,0,0.354951612318675,0.953744759789284,0.145346416632329,0.0941093804153306,0.169229215783353,0.548783918618318,0.526139422875686,0.543216455383447,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0.90739263392049,0.500895729946347,0.503637815735669,0.934450562382103,0.258246646883153,0.140788722151667,0,0,0,0.342401459862411,0.174840804837995,1.33243904726265,0.404950534779652,1.39912375625629,0.473193248037357,0.411343300817216,0,0.850432901510698,0.397163804803541,0.261199789138935,1.27993938234725,0.91763712426868,0,0,0.646413698057667,3.42042155021473,1.26015064879965,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0.498703936075477,0.408338712524738,0,2.3440060335714,1.57057123192139,1.76469446409304,0.683045484958446,0,0.629484089877886,0.405507724878058,0.367093504323363,0.782391344348039,1.74420125104357,1.5378032791413,1.94429899074283,1.95980990275508,0,0,0,0.672187598284928,1.54355661621568,0.573066879877513,1.03134418455488,1.41621522601718,2.64495489636016,2.53532561402472,1.69422266034566,2.66788438833342,0.449949858640699,0.988866362566974,0,2.99600110518405,4.61061966385865,1.03689612308478,2.8351247049655,1.89292465216244,3.42781181284564,5.52171352379034,1.10241719293459,1.15014565221884,0.919218786610021,4.40463523997555,2.29837208553338,3.37934373163736,1.71452174049252,4.48289453651807,1.04182674111352,4.4669279840221,2.25105044012672,3.0559649555362,1.76777151284201,5.97961059356232,2.23679334990361,0.454357159999104,0.226714680320357,0.289864488701678,0,0.679971333707751,0,0,0,0.140444420131752,0.511290967734173,1.81850203222008,0.70667914902068,0.422530259330042,1.28326477414318,0,0,0,0,0,0.5709193985953,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0.125666591329675,0,0,0.884610551949874,0,0.441683036920787,0.484875253135222,3.72783522436244,0.585561594023094,3.14170060220183,1.02182822083437,1.43778149407104,0,0.381210681219194,1.04853447583376,0.457500602818626,0.753926112677186,1.21677024134594,1.02286182932132,0.62336413367868,1.46017136760982,0.101839363850316,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.150704817835715,0.272145996605311,0.12811372028485,0.468508622798644,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,1.0447564995665,0.411564272815887,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0.469052119962192,0.36012412292203,0.23674473558521,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0,0.329119699826961,0.656669856316381,0.162137619091711,0.584799949701329,0.439100230582101,0.134206418760372,1.05144974282064,1.02904612379284,0.330418782983798,0.264450566663544,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0.474529061544512,0.329397909448022,0.754005626400808,0.596869416123452,0.58489226135736,0,0.432276099749388,0.597423819763102,0.189667900953082,0,0,0.407302655690628,0,0.350679099451593,0.189709611372772,0.147610147979602,0,0.246794327843601,0,0,0,0.674586337154561,0.202860121388503,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0.372140947668503,0,0.505157755894224,0.358794827043824,0,0.184753190166605,0.189491411770485,0,0.339490171550376,0.469380496577004,0.502518772325447,0,0.195133647857799,0.472905432318573,0.44292937929755,0.478364305972461,0.163863314715738,0,0,1.50791283939272,1.08781136763742,0,0,0.80275294993896,1.28932855251423,0.655739781506702,0.252470927204373,0.631016438832513,0,0,0.477937595905104,1.11399337041197,0.849229592366497,0.404810701674894,1.16902343164525,0.395287777946524,0.642642632843614,0,0.178065603667255,0.162886959353576,0,0,0,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0.900305470156551,0.258717367565509,0.643011105094777,1.24138163549592,0.356737635204141,0,0.913394847343798,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.358117032009409,0.328281799490123,0.582961673259701,0.370850604021019,0.512612642393558,0.206386867963223,0,0.565105371014073,0.136694227721025,0.457556346413045,0.169978429993855,0.419854356970974,0.552799895217695,0,0.316335993581135,0.203319467126849,0.216010681643603,0.836353184057875,0.218362563746178,0,0.247960367176008,0.523511883968059,0,0.621339313086926,2.25477175473676,0.149516546043979,0,0,0.516639293910924,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,1.44950472495604,1.44015003128933,0.316011120628178,0.810900861160657,0.308132871494482,0.25984164595559,0.179026695667481,0.39736270956253,0.480781798079875,0.147689527174577,0.100966449948148,0.381034033274999,0.403304740547362,0,0.192423683280659,0,0.226730383615211,0,0.0897138566094757,0.503653849092235,0.386379188064381,0.187682475451182,0.183151624267265,0.214368379079066,0,3.3885110557024,4.60325236507177,6.30185064783336,3.09335728218638,2.74033007908257,5.2877572817279,4.05013500139084,4.95353323546643,0.906284817968409,4.14208249401456,0.415149390336707,1.19707462020309,0.512200817262403,0,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0.377252682772152,0.37456602987953,0.256100609619477,0.114870937911227,0,0.927074607558844,0.192909220463705,0.412085900803307,0.588795680537589,0,0.354951612318675,0.953744759789284,0.145346416632329,0.0941093804153306,0.169229215783353,0.548783918618318,0.526139422875686,0.543216455383447,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p10@Calm3,p11@Calm1,p9@Calm2 | |short_description=p10@Calm3,p11@Calm1,p9@Calm2 | ||
}} | }} | ||
Revision as of 03:23, 19 April 2012
| Short description: | p10@Calm3, p11@Calm1, p9@Calm2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_10_at_Calm3_5end, CAGE_peak_11_at_Calm1_5end, CAGE_peak_9_at_Calm2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -429bp_to_ENSMUST00000173139_5end |
| EntrezGene: | 12313,12314,12315 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
| Ontology term | p-value | n |
|---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
