Personal tools

FFCP PHASE1:Mm9::chr3:84024775..84024818,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000221!1.39e-13!44;CL:0000133!1.39e-13!44;CL:0000117!1.47e-13!23;CL:0000337!1.47e-13!23;CL:0002319!1.99e-13!43;CL:0000393!2.39e-13!39;CL:0000211!2.39e-13!39;CL:0000540!3.15e-13!33;CL:0000047!3.15e-13!33;CL:0000031!3.15e-13!33;CL:0000404!3.15e-13!33;CL:0000055!6.34e-13!50
|ontology_enrichment_celltype=CL:0000221!1.39e-13!44;CL:0000133!1.39e-13!44;CL:0000117!1.47e-13!23;CL:0000337!1.47e-13!23;CL:0002319!1.99e-13!43;CL:0000393!2.39e-13!39;CL:0000211!2.39e-13!39;CL:0000540!3.15e-13!33;CL:0000047!3.15e-13!33;CL:0000031!3.15e-13!33;CL:0000404!3.15e-13!33;CL:0000055!6.34e-13!50
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000073!2.41e-30!75;UBERON:0001016!2.41e-30!75;UBERON:0001017!3.03e-30!73;UBERON:0005743!3.03e-30!73;UBERON:0004121!5.56e-30!102;UBERON:0000924!5.56e-30!102;UBERON:0006601!5.56e-30!102;UBERON:0002346!1.54e-28!71;UBERON:0003075!1.54e-28!71;UBERON:0007284!1.54e-28!71;UBERON:0000033!3.60e-26!63;UBERON:0001049!4.34e-25!52;UBERON:0005068!4.34e-25!52;UBERON:0006241!4.34e-25!52;UBERON:0007135!4.34e-25!52;UBERON:0000955!1.27e-23!50;UBERON:0006238!1.27e-23!50;UBERON:0002616!4.77e-23!49;UBERON:0003056!2.71e-21!49;UBERON:0002020!2.37e-18!34;UBERON:0003080!3.40e-18!40;UBERON:0002780!1.69e-17!39;UBERON:0001890!1.69e-17!39;UBERON:0006240!1.69e-17!39;UBERON:0002791!2.22e-15!29;UBERON:0003528!2.22e-15!29;UBERON:0001893!2.22e-15!29;UBERON:0007811!2.62e-12!86;UBERON:0000153!2.83e-12!94;UBERON:0000956!7.83e-11!21;UBERON:0001869!7.83e-11!21;UBERON:0000203!7.83e-11!21;UBERON:0002619!4.70e-09!17;UBERON:0000468!1.75e-07!333;UBERON:0003076!1.77e-07!12;UBERON:0003057!1.77e-07!12;UBERON:0002021!4.99e-07!10;UBERON:0000411!4.99e-07!10;UBERON:0001950!4.99e-07!10
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.77997836737302,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6255545165808,14.5982780956101,13.0318194034794,4.69434806608824,4.36050312760893,3.29529274101708,5.05517737593137,5.03951117851305,10.062679505548,0,0,0,1.54355661621568,3.72493471920384,0.515672092277442,52.3999633626358,50.2541430308431,46.2696924559511,2.03306719241479,1.77858959222228,0,1.97773272513395,0,2.09720077362883,3.45796474789399,11.716926190858,14.4456354014909,14.9330722559481,28.2794474559766,28.7129103237098,24.2531782445609,22.9070675733585,23.8996884518605,45.1475112097494,47.627377105775,40.8593378461608,56.1835585730626,45.2863835831928,48.9658568323354,44.669279840221,37.7050948721226,39.1163514308634,50.0868595305235,53.95886702286,47.5318586854516,2.34751199332871,9.59758813356176,0.579728977403356,0,0,0,0,0,2.38755514223978,2.72688516124892,1.55871602761721,1.7666978725517,6.19711047017394,7.69958864485907,2.54805239706646,0,0,0,0,1.48439043634778,3.6251303710604,4.00793775475027,3.29622120855658,5.78484408793068,4.61230994512117,4.22023393547343,3.76283862834255,1.25666591329675,0,1.87979163995885,0,4.36770494858005,1.10420759230197,0.484875253135222,0,92.2259510586373,110.168967783877,0.766371165625774,0,0,0,55.722117858594,39.8025524452205,40.2093926761166,60.4908634269122,47.8187905207718,45.2977937139841,43.4806585021591,3.25885964321012,0.870848794270651,0.252722758433675,2.94618598241064,10.4096354370163,13.7941262660084,15.1252189036493,18.0845781402858,13.9474823260222,15.1174189936123,13.493048336601,11.1242449417777,1.5089759505299,3.21480336285293,5.80638709741031,1.97276159184817,2.22437799380478,2.089512999133,3.08673204611915,2.7864797354589,0,0.257347907114715,0,2.48550927042602,1.87620847984877,1.62055855314913,2.3674473558521,1.57411385397923,0.925602677324269,0.697601834251224,1.07309360559848,0.583826711835847,1.48103864922132,2.13417703302824,1.05389452409612,0.877199924551994,1.3173006917463,1.34206418760372,36.1698711530299,37.8688973555767,0.330418782983798,0,4.69234151177515,4.41249676534833,4.63922860759536,3.02525286935014,2.44615848229357,2.28270751335071,1.89811624617805,1.4822905925161,1.75934646160189,1.98956472041151,1.75467678407208,1.79763881730844,0.432276099749388,0.597423819763102,1.13800740571849,3.19895835307241,4.50830942692322,3.05476991767971,1.35766741017338,1.61312385747733,1.3279672796094,0.885660887877613,0.941992367048249,0.616985819609003,0,1.00107063429656,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0,0,0.554259570499814,5.49525094134406,3.09633455239849,2.03694102930226,2.11221223459652,1.34005005953453,0.238043640886014,0,1.57635144106191,1.10732344824387,1.2756381492599,1.3109065177259,1.38147985492716,0.433947175744535,6.03165135757089,3.80733978673097,0.491764273019036,0.275936746304732,61.6514265553121,63.1770990731975,5.90165803356032,3.02965112645248,4.41711507182759,6.24701990874622,9.90947629570875,1.91175038362042,3.34198011123591,5.09537755419898,4.04810701674894,4.9683495844923,3.95287777946523,37.9159153377732,2.6968616189571,1.78065603667255,4.56083486190013,5.1140738121486,0,1.69946445308487,0.906970670894253,0.565815239267694,0.590603785761546,2.15204603560749,1.55056975900933,1.81766864738753,1.78248689192361,1.8962205476149,0,0,16.000661470428,8.64293251350289,3.36332577835162,3.85806663056866,8.6896714484714,6.95638388648075,11.5184314421485,4.26250928760439,0.704015124191131,0.21183207086382,1.10264199027481,2.4732937941222,1.29171541356724,2.77439454669517,0.716234064018819,1.96969079694074,0.291480836629851,63.2300279855838,0,0.412773735926445,0,0,0,0,0,0,0,0,5.21954389408873,2.43983360552218,3.02414954301044,3.97267762427491,3.71216358368502,4.04593039154462,3.63675205191478,1.83229159388821,2.20345454596048,0.621339313086926,0,1.34564891439581,1.48912641411388,2.91676782516071,1.16243841129958,3.8859908862879,4.10750335260139,2.8644964665669,1.04859344425711,0.483168241652012,0,0.316011120628178,1.21635129174099,1.02710957164827,0.649604114888975,0,0.79472541912506,0.120195449519969,0.147689527174577,0.504832249740738,0,0.201652370273681,0,0.288635524920988,0.116876902181569,2.0405734525369,0,0.269141569828427,0,4.44336066274038,2.43987218086537,1.83151624267265,1.50057865355346,0,44.6153955667483,49.2548003062679,50.4148051826669,36.9484342038928,41.1049511862385,36.2589070747056,46.5765525159946,47.7340475417674,49.8456649882625,39.8675440048901,11.5203955818436,15.1629451892392,14.000155671839,8.50873509739029,14.6729213839588,12.501358574601,14.0015438515018,10.5077879191836,10.9112531261217,9.8551912587881,13.1809235942925,11.5062068245506,9.17686773204848,8.25924466022814,8.38557846751954,7.62069906052918,9.38663040153329,11.3816440073586,8.65380391686944,11.481515770483,10.9718160763333,11.7134032065163,10.7296285476294,9.30217066446903,10.4461412261017,11.6768158890514,8.78054269789308,7.89209134313529,9.77789619690205,10.661703161497,10.3212465768031,9.85044823755635,9.41231399290286,9.76102099471586,9.25951732709479,15.4882558321526,8.65546951248011,11.3881658645598,5.7386499620653,7.0589254118245,7.41977073985349
|phase1_expression=4.80446541314382,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,9.77997836737302,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6255545165808,14.5982780956101,13.0318194034794,4.69434806608824,4.36050312760893,3.29529274101708,5.05517737593137,5.03951117851305,10.062679505548,0,0,0,1.54355661621568,3.72493471920384,0.515672092277442,52.3999633626358,50.2541430308431,46.2696924559511,2.03306719241479,1.77858959222228,0,1.97773272513395,0,2.09720077362883,3.45796474789399,11.716926190858,14.4456354014909,14.9330722559481,28.2794474559766,28.7129103237098,24.2531782445609,22.9070675733585,23.8996884518605,45.1475112097494,47.627377105775,40.8593378461608,56.1835585730626,45.2863835831928,48.9658568323354,44.669279840221,37.7050948721226,39.1163514308634,50.0868595305235,53.95886702286,47.5318586854516,2.34751199332871,9.59758813356176,0.579728977403356,0,0,0,0,0,2.38755514223978,2.72688516124892,1.55871602761721,1.7666978725517,6.19711047017394,7.69958864485907,2.54805239706646,0,0,0,0,1.48439043634778,3.6251303710604,4.00793775475027,3.29622120855658,5.78484408793068,4.61230994512117,4.22023393547343,3.76283862834255,1.25666591329675,0,1.87979163995885,0,4.36770494858005,1.10420759230197,0.484875253135222,0,92.2259510586373,110.168967783877,0.766371165625774,0,0,0,55.722117858594,39.8025524452205,40.2093926761166,60.4908634269122,47.8187905207718,45.2977937139841,43.4806585021591,3.25885964321012,0.870848794270651,0.252722758433675,2.94618598241064,10.4096354370163,13.7941262660084,15.1252189036493,18.0845781402858,13.9474823260222,15.1174189936123,13.493048336601,11.1242449417777,1.5089759505299,3.21480336285293,5.80638709741031,1.97276159184817,2.22437799380478,2.089512999133,3.08673204611915,2.7864797354589,0,0.257347907114715,0,2.48550927042602,1.87620847984877,1.62055855314913,2.3674473558521,1.57411385397923,0.925602677324269,0.697601834251224,1.07309360559848,0.583826711835847,1.48103864922132,2.13417703302824,1.05389452409612,0.877199924551994,1.3173006917463,1.34206418760372,36.1698711530299,37.8688973555767,0.330418782983798,0,4.69234151177515,4.41249676534833,4.63922860759536,3.02525286935014,2.44615848229357,2.28270751335071,1.89811624617805,1.4822905925161,1.75934646160189,1.98956472041151,1.75467678407208,1.79763881730844,0.432276099749388,0.597423819763102,1.13800740571849,3.19895835307241,4.50830942692322,3.05476991767971,1.35766741017338,1.61312385747733,1.3279672796094,0.885660887877613,0.941992367048249,0.616985819609003,0,1.00107063429656,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0,0.549122826376163,0,0,0.312037673114561,0,0,0,0.554259570499814,5.49525094134406,3.09633455239849,2.03694102930226,2.11221223459652,1.34005005953453,0.238043640886014,0,1.57635144106191,1.10732344824387,1.2756381492599,1.3109065177259,1.38147985492716,0.433947175744535,6.03165135757089,3.80733978673097,0.491764273019036,0.275936746304732,61.6514265553121,63.1770990731975,5.90165803356032,3.02965112645248,4.41711507182759,6.24701990874622,9.90947629570875,1.91175038362042,3.34198011123591,5.09537755419898,4.04810701674894,4.9683495844923,3.95287777946523,37.9159153377732,2.6968616189571,1.78065603667255,4.56083486190013,5.1140738121486,0,1.69946445308487,0.906970670894253,0.565815239267694,0.590603785761546,2.15204603560749,1.55056975900933,1.81766864738753,1.78248689192361,1.8962205476149,0,0,16.000661470428,8.64293251350289,3.36332577835162,3.85806663056866,8.6896714484714,6.95638388648075,11.5184314421485,4.26250928760439,0.704015124191131,0.21183207086382,1.10264199027481,2.4732937941222,1.29171541356724,2.77439454669517,0.716234064018819,1.96969079694074,0.291480836629851,63.2300279855838,0,0.412773735926445,0,0,0,0,0,0,0,0,5.21954389408873,2.43983360552218,3.02414954301044,3.97267762427491,3.71216358368502,4.04593039154462,3.63675205191478,1.83229159388821,2.20345454596048,0.621339313086926,0,1.34564891439581,1.48912641411388,2.91676782516071,1.16243841129958,3.8859908862879,4.10750335260139,2.8644964665669,1.04859344425711,0.483168241652012,0,0.316011120628178,1.21635129174099,1.02710957164827,0.649604114888975,0,0.79472541912506,0.120195449519969,0.147689527174577,0.504832249740738,0,0.201652370273681,0,0.288635524920988,0.116876902181569,2.0405734525369,0,0.269141569828427,0,4.44336066274038,2.43987218086537,1.83151624267265,1.50057865355346,0,44.6153955667483,49.2548003062679,50.4148051826669,36.9484342038928,41.1049511862385,36.2589070747056,46.5765525159946,47.7340475417674,49.8456649882625,39.8675440048901,11.5203955818436,15.1629451892392,14.000155671839,8.50873509739029,14.6729213839588,12.501358574601,14.0015438515018,10.5077879191836,10.9112531261217,9.8551912587881,13.1809235942925,11.5062068245506,9.17686773204848,8.25924466022814,8.38557846751954,7.62069906052918,9.38663040153329,11.3816440073586,8.65380391686944,11.481515770483,10.9718160763333,11.7134032065163,10.7296285476294,9.30217066446903,10.4461412261017,11.6768158890514,8.78054269789308,7.89209134313529,9.77789619690205,10.661703161497,10.3212465768031,9.85044823755635,9.41231399290286,9.76102099471586,9.25951732709479,15.4882558321526,8.65546951248011,11.3881658645598,5.7386499620653,7.0589254118245,7.41977073985349
|short_description=p1@Trim2
|short_description=p1@Trim2
}}
}}

Revision as of 11:37, 19 April 2012

Short description:p1@Trim2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim2_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000107693, ENSMUST00000107695, ENSMUST00000136651, ENSMUST00000137596, ENSMUST00000140856, ENSMUST00000154152, NM_030706, uc008pqa.2, uc008pqb.2, uc012cqx.1_5end
EntrezGene:Trim2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.78
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.60
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B313.03
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.06
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.04
Mouse Astrocytes, donor3.CNhs12107.11633-122C410.06
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C352.40
Mouse Granule cells, donor2.CNhs12357.11731-123E350.25
Mouse Granule cells, donor3.CNhs12108.11636-122C746.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.72
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.45
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.93
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D224.25
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.91
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D345.15
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.63
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.86
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D456.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F445.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.97
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E444.67
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I639.12
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F653.96
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E147.53
Mouse Schwann, donor1.CNhs12507.11728-123D92.35
Mouse Schwann, donor2.CNhs12573.11746-123F99.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H93.63
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F54.22
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.37
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B292.23
cerebellum, neonate N30.CNhs11135.1395-42I2110.17
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A455.72
corpus striatum, adult.CNhs10487.19-21D839.80
corpus striatum, neonate N00.CNhs11226.630-43F140.21
cortex, adult.CNhs10473.12-14D560.49
cortex, neonate N30.CNhs11107.1392-42F247.82
diencephalon, adult.CNhs10482.20-12F245.30
diencephalon, neonate N30.CNhs11201.1388-42B243.48
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E213.79
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D418.08
eyeball, neonate N00.CNhs11207.633-15C613.95
eyeball, neonate N01.CNhs11140.1532-43E715.12
eyeball, neonate N02.CNhs11205.1551-44G813.49
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H23.21
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E836.17
hippocampus, neonate N00.CNhs11228.627-43G137.87
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D54.41
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H43.03
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.20
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C52.04
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C261.65
medulla oblongata, neonate N30.CNhs11200.1396-42A363.18
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.90
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.25
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I937.92
ovary, adult.CNhs10507.91-2I72.70
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G65.11
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G816.00
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B98.69
pituitary gland, embryo E16.CNhs11036.449-43F66.96
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C963.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A93.64
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I51.16
testis, embryo E18.CNhs11027.503-18G53.89
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I42.86
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A249.25
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A350.41
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D736.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.10
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A536.26
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A646.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A939.87
whole body, embryo E11.CNhs11014.324-5I811.52
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H214.00
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B114.67
whole body, embryo E16.CNhs10514.453-14F212.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.51
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.86
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.38
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F99.26
whole body, embryo E17.CNhs10517.475-3I515.49
whole body, embryo E18.CNhs10516.493-3B38.66
whole body, neonate N00.CNhs10525.657-19C211.39
whole body, neonate N01.CNhs10576.659-23C65.74
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:84024775..84024818,-&oldid=1064000"