Personal tools

FFCP PHASE1:Mm9::chr4:116229726..116229746,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_at_chr4:116229726..116229746,+
|description=CAGE_peak_at_chr4:116229726..116229746,+
|id=chr4:116229726..116229746,+
|id=chr4:116229726..116229746,+
|ontology_enrichment_celltype=CL:0002031!6.24e-08!25;CL:0000542!2.39e-07!13;CL:0000051!2.39e-07!13;CL:0000988!3.64e-07!32;CL:0002032!3.64e-07!32;CL:0000037!3.64e-07!32;CL:0000566!3.64e-07!32;CL:0000837!3.64e-07!32;CL:0000838!5.27e-07!12
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=0.160148847104794,2.44282785347553,0.909998478779072,3.32710632437513,2.00358291978539,1.51091344720701,2.10251376535973,3.87369970324729,2.25261955442667,3.5109678948299,3.76679530096111,4.86610169871552,2.39681021903688,3.93391810885488,5.66286595086627,2.83465374345756,4.19737126876888,1.10411757875383,1.91960207048034,1.27316895539409,5.44277056966847,2.28369187762036,2.08959831311148,2.71987118748791,1.37645568640302,0,0.86152399231815,1.72376986148711,2.47030445293286,1.00812051903972,1.55211357458713,12.065582795733,3.07532393792285,15.8481681015439,2.02196133825892,2.65975432573588,4.28755648150975,1.25559489221072,0.7813353445238,3.66466620781659,0,1.36609096991689,2.42755176515577,1.00717454380462,0.405507724878058,0,0,0.218025156380447,0.439372365468944,1.1665793944457,0.279972843250725,0,5.70460860596304,2.90144856804538,4.36921938885203,1.02903774414379,0.573066879877513,0,1.41621522601718,1.05798195854407,0.633831403506179,1.0165335962074,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0.384218305321555,0.725827286159344,1.35005938331691,1.47227472945967,0.285650984403804,0.220868540951614,1.5923803897944,1.53352753629178,0,0,0.383062014255563,0,1.05509030184155,0.548925861614458,0,0.558365998002762,1.12552522006336,0.30559649555362,0.883885756421003,0.854230084794618,0.745597783301202,0.530083353332288,0.906858721281426,1.15945795480671,2.58127163094416,0,2.15881276655127,3.24888208723835,5.37632264516803,1.54488862144927,0.681721290312231,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,1.94841936910093,1.77351905832569,0.505524445014783,2.96878087269556,2.58937883647172,0.742210695324124,0.693941307064543,0.608930956624282,0.922461989024234,0.753613202763113,0.823120949949934,0.376999773989026,2.71914464507811,3.61498392299779,3.5384422077995,1.45590164952668,0.883366073841574,1.93950101254089,3.72783522436244,1.17112318804619,0.41889341362691,1.53274233125155,2.15667224110656,2.99951365496704,1.27070227073065,0.898743836428936,0.457500602818626,1.7591609295801,0.347648640384553,0,0,1.1356888414743,0.509196819251581,1.61729061793121,1.76905930903572,1.68353484709179,1.43132487258974,1.83921683546778,1.26043490863744,1.65775299619287,1.7009124787832,1.15302348256365,1.03071897015702,0.258703370739016,1.94011193639558,1.13463648100692,1.75951124163949,0.657587197282725,1.66828349535359,1.0447564995665,1.23469281844766,0.995171334092466,1.40442637462647,0,0.568326998791185,0.621377317606506,1.17263029990548,0.540186184383045,1.18372367792605,0.983821158737019,0.462801338662135,1.62773761325285,0.536546802799238,0.350296027101508,0.822799249567402,0.656669856316381,0.324275238183423,0.438599962275997,1.3173006917463,0.402619256281115,1.47202963994889,1.13195073617213,2.97376904685418,2.64450566663544,2.55945900642281,0.696710015581316,2.44848176511977,1.81515172161008,0.889512175379481,2.28270751335071,1.42358718463353,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,3.38540164532424,1.51734320762465,0.913988100877831,0,1.83286195060783,0.969762435838129,0.701358198903186,1.01178459398812,1.62371162777562,1.72698600625512,0.987177311374404,5.03969466048153,3.00321190288969,3.73462090715086,2.02375901146368,1.82574109249653,0.72353147925725,3.05551022137704,1.43848068725405,1.45921704097532,2.47105271869273,2.87536413054709,2.23284568601102,1.24815069245824,2.02063102357689,1.25578189465339,0.482443521363367,1.84753190166605,0.947457058852424,2.11854469374634,1.35796068620151,0.704070744865506,2.01007508930179,1.19021820443007,0.195133647857799,0.630540576424764,0.664394068946325,1.2756381492599,1.63863314715738,1.20879487306127,1.3018415272336,3.01582567878545,1.08781136763742,3.93411418415229,2.20749397043786,1.44495530989013,0.937693492737625,0.983609672260053,1.51482556322624,0.315508219416257,0.780877488593277,1.29254038639679,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,1.46127928955656,0.790575555893047,0.642642632843614,1.41940085208269,1.42452482933804,0.488660878060728,1.48473110675282,1.32745138339963,0.242780636154981,0.302323556964751,0.565815239267694,1.47650946440386,0.922305443831782,1.03371317267288,0,1.06949213515416,1.26414703174326,2.10837217149998,2.06271086496374,0.680879211507576,2.16073312837572,0.905510786479282,0.857348140126369,0.886701168211368,0.713475270408282,0.329098041204242,0.913394847343798,1.40803024838226,1.48282449604674,1.10264199027481,1.81374878235628,0.322928853391811,1.74907482291652,2.14870219205646,1.80554989719567,1.45740418314925,1.11255181206306,2.05045056957423,0.82554747185289,3.51869602002452,2.63715839806567,4.51090951479383,4.11800711771741,1.18984900995699,2.6590775941495,1.24379976423981,0.954670618015114,0.790839983952838,1.01659733563424,1.51207477150522,1.67270636811575,1.9652630737156,2.15782954215713,0.909188012978695,0.785267825952089,2.98114438571124,0.621339313086926,23.1114104860518,1.79419855252775,1.15820943319968,1.94451188344048,1.03327858782185,1.35164900392623,0.58678619322877,1.69265700297135,5.24296722128554,23.1920755992966,19.5860404255349,5.05617793005085,0.608175645870493,1.64337531463724,1.94881234466693,1.9692936523423,0.993406773906324,1.9231271923195,2.80610101631697,2.82706059854813,2.89585865288999,2.11734988787365,2.14407337627455,2.79014340756955,1.5193997283604,1.58711268530648,5.10567692760349,3.6782681209885,3.52557694364565,1.54551675225752,1.50145980360946,0.73260649706906,1.2862102744744,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,1.24544817101012,0.399024873401031,2.04880326904961,1.21553358534147,0,0.735374033800057,1.11123363900808,1.85431551515005,1.60459604795908,1.51618327058278,1.52087579934144,0.188626341386076,1.40462261204824,1.02440243847791,1.55075766180156,1.42888107384922,0.927074607558844,1.15745532278223,0.824171801606613,1.32479028120958,0,0.354951612318675,0.953744759789284,1.16277133305863,1.2234219453993,0.930760686808441,1.09756783723664,2.10455769150274,2.17286582153379,0.561142271657738,1.18635018124174,0.689531376628944,1.22769312950907,0.464810523557898,1.54325288784913,1.24905288968973,0.935726433781634,2.36358159453128,0.57386499620653,3.30887128679273,1.62307484934295
|phase1_expression=0.160148847104794,2.44282785347553,0.909998478779072,3.32710632437513,2.00358291978539,1.51091344720701,2.10251376535973,3.87369970324729,2.25261955442667,3.5109678948299,3.76679530096111,4.86610169871552,2.39681021903688,3.93391810885488,5.66286595086627,2.83465374345756,4.19737126876888,1.10411757875383,1.91960207048034,1.27316895539409,5.44277056966847,2.28369187762036,2.08959831311148,2.71987118748791,1.37645568640302,0,0.86152399231815,1.72376986148711,2.47030445293286,1.00812051903972,1.55211357458713,12.065582795733,3.07532393792285,15.8481681015439,2.02196133825892,2.65975432573588,4.28755648150975,1.25559489221072,0.7813353445238,3.66466620781659,0,1.36609096991689,2.42755176515577,1.00717454380462,0.405507724878058,0,0,0.218025156380447,0.439372365468944,1.1665793944457,0.279972843250725,0,5.70460860596304,2.90144856804538,4.36921938885203,1.02903774414379,0.573066879877513,0,1.41621522601718,1.05798195854407,0.633831403506179,1.0165335962074,0,0.899899717281399,0,0.7104801149461,0.599200221036809,0.384218305321555,0.725827286159344,1.35005938331691,1.47227472945967,0.285650984403804,0.220868540951614,1.5923803897944,1.53352753629178,0,0,0.383062014255563,0,1.05509030184155,0.548925861614458,0,0.558365998002762,1.12552522006336,0.30559649555362,0.883885756421003,0.854230084794618,0.745597783301202,0.530083353332288,0.906858721281426,1.15945795480671,2.58127163094416,0,2.15881276655127,3.24888208723835,5.37632264516803,1.54488862144927,0.681721290312231,0.259786004602869,0.70667914902068,0.563373679106722,0,0,0,1.94841936910093,1.77351905832569,0.505524445014783,2.96878087269556,2.58937883647172,0.742210695324124,0.693941307064543,0.608930956624282,0.922461989024234,0.753613202763113,0.823120949949934,0.376999773989026,2.71914464507811,3.61498392299779,3.5384422077995,1.45590164952668,0.883366073841574,1.93950101254089,3.72783522436244,1.17112318804619,0.41889341362691,1.53274233125155,2.15667224110656,2.99951365496704,1.27070227073065,0.898743836428936,0.457500602818626,1.7591609295801,0.347648640384553,0,0,1.1356888414743,0.509196819251581,1.61729061793121,1.76905930903572,1.68353484709179,1.43132487258974,1.83921683546778,1.26043490863744,1.65775299619287,1.7009124787832,1.15302348256365,1.03071897015702,0.258703370739016,1.94011193639558,1.13463648100692,1.75951124163949,0.657587197282725,1.66828349535359,1.0447564995665,1.23469281844766,0.995171334092466,1.40442637462647,0,0.568326998791185,0.621377317606506,1.17263029990548,0.540186184383045,1.18372367792605,0.983821158737019,0.462801338662135,1.62773761325285,0.536546802799238,0.350296027101508,0.822799249567402,0.656669856316381,0.324275238183423,0.438599962275997,1.3173006917463,0.402619256281115,1.47202963994889,1.13195073617213,2.97376904685418,2.64450566663544,2.55945900642281,0.696710015581316,2.44848176511977,1.81515172161008,0.889512175379481,2.28270751335071,1.42358718463353,0.823494773620054,1.75934646160189,1.1937388322469,0.974820435595601,1.79763881730844,1.08069024937347,3.38540164532424,1.51734320762465,0.913988100877831,0,1.83286195060783,0.969762435838129,0.701358198903186,1.01178459398812,1.62371162777562,1.72698600625512,0.987177311374404,5.03969466048153,3.00321190288969,3.73462090715086,2.02375901146368,1.82574109249653,0.72353147925725,3.05551022137704,1.43848068725405,1.45921704097532,2.47105271869273,2.87536413054709,2.23284568601102,1.24815069245824,2.02063102357689,1.25578189465339,0.482443521363367,1.84753190166605,0.947457058852424,2.11854469374634,1.35796068620151,0.704070744865506,2.01007508930179,1.19021820443007,0.195133647857799,0.630540576424764,0.664394068946325,1.2756381492599,1.63863314715738,1.20879487306127,1.3018415272336,3.01582567878545,1.08781136763742,3.93411418415229,2.20749397043786,1.44495530989013,0.937693492737625,0.983609672260053,1.51482556322624,0.315508219416257,0.780877488593277,1.29254038639679,0.477937595905104,0.222798674082394,0.566153061577665,0.404810701674894,1.46127928955656,0.790575555893047,0.642642632843614,1.41940085208269,1.42452482933804,0.488660878060728,1.48473110675282,1.32745138339963,0.242780636154981,0.302323556964751,0.565815239267694,1.47650946440386,0.922305443831782,1.03371317267288,0,1.06949213515416,1.26414703174326,2.10837217149998,2.06271086496374,0.680879211507576,2.16073312837572,0.905510786479282,0.857348140126369,0.886701168211368,0.713475270408282,0.329098041204242,0.913394847343798,1.40803024838226,1.48282449604674,1.10264199027481,1.81374878235628,0.322928853391811,1.74907482291652,2.14870219205646,1.80554989719567,1.45740418314925,1.11255181206306,2.05045056957423,0.82554747185289,3.51869602002452,2.63715839806567,4.51090951479383,4.11800711771741,1.18984900995699,2.6590775941495,1.24379976423981,0.954670618015114,0.790839983952838,1.01659733563424,1.51207477150522,1.67270636811575,1.9652630737156,2.15782954215713,0.909188012978695,0.785267825952089,2.98114438571124,0.621339313086926,23.1114104860518,1.79419855252775,1.15820943319968,1.94451188344048,1.03327858782185,1.35164900392623,0.58678619322877,1.69265700297135,5.24296722128554,23.1920755992966,19.5860404255349,5.05617793005085,0.608175645870493,1.64337531463724,1.94881234466693,1.9692936523423,0.993406773906324,1.9231271923195,2.80610101631697,2.82706059854813,2.89585865288999,2.11734988787365,2.14407337627455,2.79014340756955,1.5193997283604,1.58711268530648,5.10567692760349,3.6782681209885,3.52557694364565,1.54551675225752,1.50145980360946,0.73260649706906,1.2862102744744,0.501572104035363,0.564751842617067,0.460325236507177,1.14579102687879,0.343706364687375,0.685082519770642,0.755393897389701,0,0.45032120322422,0.906284817968409,0.51776031175182,1.24544817101012,0.399024873401031,2.04880326904961,1.21553358534147,0,0.735374033800057,1.11123363900808,1.85431551515005,1.60459604795908,1.51618327058278,1.52087579934144,0.188626341386076,1.40462261204824,1.02440243847791,1.55075766180156,1.42888107384922,0.927074607558844,1.15745532278223,0.824171801606613,1.32479028120958,0,0.354951612318675,0.953744759789284,1.16277133305863,1.2234219453993,0.930760686808441,1.09756783723664,2.10455769150274,2.17286582153379,0.561142271657738,1.18635018124174,0.689531376628944,1.22769312950907,0.464810523557898,1.54325288784913,1.24905288968973,0.935726433781634,2.36358159453128,0.57386499620653,3.30887128679273,1.62307484934295
|short_description=p@chr4:116229726..116229746,+
|short_description=p@chr4:116229726..116229746,+
}}
}}

Revision as of 20:10, 18 April 2012

Short description:p@chr4:116229726..116229746, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr4:116229726..116229746, +
Coexpression cluster:NA
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr4:116229726..116229746+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.87
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.87
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.40
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.20
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.38
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.72
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H13.61
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.16
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.77
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.84
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D51.01
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H63.73
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A32.02
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.28
lung, neonate N20.CNhs11109.822-18A41.64
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A30.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.42
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H31.75
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H14.51
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.24
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I12.98
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G523.11
testis, embryo E13.CNhs11031.389-23F51.79
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H323.19
testis, neonate N30.CNhs11130.1391-42E219.59
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.83
thymus, neonate N07.CNhs11211.713-19D32.90
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.14
thymus, neonate N25.CNhs11125.1362-25G72.79
thymus, neonate N30.CNhs11132.1393-42G21.52
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.68
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.53
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.50
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:116229726..116229746,%2B&oldid=946588"