Personal tools

FFCP PHASE1:Mm9::chr3:103083637..103083703,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 6: Line 6:
|description=CAGE_peak_1_at_Trim33_5end
|description=CAGE_peak_1_at_Trim33_5end
|id=chr3:103083637..103083703,+
|id=chr3:103083637..103083703,+
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|phase1_expression=24.9832201483479,34.1995899486574,35.0349414329943,55.9558790917636,43.5779285053322,31.8970616632591,34.5746708081378,32.0225842135109,25.764336153755,23.6405171585213,23.4568616468942,24.1709641755869,44.1697883222511,34.00653654099,68.6206109340265,45.7594104301007,44.7719602002014,45.8997450596236,51.0065693013348,41.1657962244089,26.788636397587,22.2411730689983,17.2391860831697,25.4387952241517,21.3350631392468,24.6919744569459,21.9688618041128,27.3648465511079,19.7624356234629,16.3819584343955,15.5211357458713,31.7515336729816,33.8285633171514,95.0890086092632,23.6858328196045,16.4572298904907,17.9669033510885,47.7126059040075,25.7840663692854,28.7938059185589,49.4114449946052,54.6436387966757,40.2973593015858,22.4096335996528,20.5795170375615,15.7850206859046,14.0830441982647,8.06693078607652,6.15121311656521,13.9989527333484,7.41928034614421,1.43752564364972,53.6904339384756,71.8108520591231,82.6790745890461,17.7509010864803,28.9398774338144,17.532851137433,31.7636843549569,34.3844136526821,46.2696924559511,6.77689064138264,5.33576877666684,6.74924787961049,15.8218618010716,6.3943210345149,11.085204089181,17.6740420447915,32.1437798156281,23.7610451463776,29.0248446664907,19.4242669394586,20.3199057675484,35.6448225715516,23.4821403994679,46.8801581171111,72.6764814595965,44.179818977475,46.8499926431543,29.938187314754,17.3826522844578,40.1103295328705,26.5223849051312,41.6444331423443,41.7139216430692,40.0694876244188,29.8980529678116,36.5342913817589,11.1317504199781,15.492169821891,37.1026545538148,20.6501730475533,25.8389106808945,31.3027851149934,29.8897152025928,29.1217476613268,26.6844398250329,12.2709832256202,8.05336614268893,13.4269038313929,23.0983208433756,19.2489716121477,38.2207859559969,142.213340630666,32.6901471926933,30.6565437224869,35.3867111510348,30.2587281255509,24.5990989464813,37.7043033224655,19.0833859442749,22.5304453950985,19.832932764021,21.1011696773672,26.692636519805,25.0076516746054,56.1132576757029,24.1480926056252,34.4998115260451,20.3826230933736,33.126227769059,33.4563924663303,46.5979403045305,49.4799546949515,43.3554683103852,28.8666472385708,17.2533779288525,9.59844369589452,15.3754974758408,46.8844701337095,52.1550687213234,42.2198623099224,43.4560800480691,34.7773021969249,35.7395436642443,39.1001443993296,21.1825876808658,33.7142890353352,18.7014841240919,52.820905827505,23.6819206192121,17.2426578325105,22.3277040958633,26.976162392593,27.4867456571365,31.7722026306427,29.9845518591132,54.5864112259323,18.1077114063587,32.7153518690327,29.5597888595434,17.9740500590611,31.4193391624926,27.8601733217733,32.5135775524551,31.4474141573219,19.6619692447706,16.4702660553418,15.6289924667576,16.3629360303046,18.5275587385066,18.0062061461015,19.8865577891577,18.1023093207612,16.0437797402873,17.672579801031,20.1205051049714,17.8650973821769,18.9243827400503,18.5509234409378,22.2939226251103,19.1521983527185,23.7114124514335,22.8150911892632,42.899149507082,40.1327988279209,33.7027158643474,25.6517049663638,29.6470668243975,29.7262939981361,26.288962109707,29.6474781196314,28.6867676559883,31.7676795607974,26.5736274464927,28.6576181219779,33.9302531880364,33.4246873029133,31.1942539390592,22.4704852163555,30.0431889325825,26.6849306160852,11.569741958138,26.6199034380668,29.3040112750009,27.6965805869627,27.9291581521381,26.5113399185404,27.760839797549,26.1269961923896,28.1027722836061,24.9262271122037,29.6452627087149,34.7037819889476,37.3462090715086,33.5044547453432,37.529122456873,34.2471566848432,29.0273471030819,28.4819176076303,21.7261203878547,24.4359657737393,81.9478777205921,26.7941482321322,22.4667124642484,25.2578877947112,22.6040741037609,18.332853811808,39.1676763153202,18.759649765278,26.2373612071662,31.7423310399602,28.3975200429088,29.983620082085,30.4695860334098,29.6603144743854,38.3053400178044,29.2333390336383,30.6153155822375,41.9490085672289,30.5652417902635,37.7534042897745,46.7452980211744,39.1612092349471,43.7670202986942,49.1167408422424,31.4679156376072,32.5848488726325,20.0000633359544,21.7124997395761,24.9251493338843,22.2550084249084,45.6697603193534,36.5622260867405,38.7669692903366,56.0491530961888,33.5992882390162,41.208075965495,39.5287777946523,43.6996990333658,34.349500620401,17.2723635557238,25.5732526185114,37.4482179147656,53.0980553359851,25.734747432428,22.3719432153916,26.7819213253375,22.147641966058,26.1319875752338,28.6855405416725,29.8097658171555,28.5197902707777,25.2829406348653,33.7339547439996,41.2542172992747,27.235168460303,25.7487364464774,12.6771510107099,24.6487590286331,30.5025201864711,23.9014215586775,26.1632942757372,10.0473433207818,28.395276675709,33.8931313382112,35.9461288829588,27.7008904941686,29.7094545120466,27.7439454669517,27.3362667767183,39.8862386380499,36.4351045787313,32.0785772478182,43.0594619610589,23.5281029478074,37.0389054739423,36.7318491159147,45.2457893756593,40.0361803111415,20.5673900292565,18.6135431590465,17.5513966731618,17.184071124272,24.0415355121663,27.8547669963783,24.6252177073707,35.1268337304307,34.2829225081499,28.3215127408123,31.9042339099797,29.3166655022113,31.1075935900303,58.405895430171,23.675103424736,31.0994415771476,22.6678131926224,22.7507890362536,21.6988503442588,23.3159453177274,25.3491635474829,32.5510962109875,38.3785200598102,27.5405897741647,33.1234507196545,61.9381796431229,19.0561702372754,22.2882777047675,26.3739270644924,33.836045481154,33.775830312815,35.5778530579108,37.365450375168,40.2856135293109,41.8375368535949,40.7337787952836,49.8984349387532,44.7385063627532,50.8414524489825,29.4749498699775,43.9532187680648,18.8399098879899,33.2411540400875,30.7171454511183,26.4632290386167,36.8134764777203,40.7299920250225,40.6273404268644,75.1119950680698,43.2705722316746,45.2587455617123,63.7575306495081,44.5303637850917,57.4099362016172,53.3267775183127,57.190792809476,63.8930796667728,58.5069152279557,23.3521532064397,29.5278406316763,25.2685736516119,28.6865926140587,24.105513702218,20.5904729464016,29.1143213420116,28.2268028417285,36.2638706838751,25.5224183881435,29.1501194873776,26.0304351112785,24.8149994795188,25.0978597427088,23.9505905544907,26.6724467118521,24.3357084484197,24.8852894398179,30.0822707586414,31.0589721483578,34.9726637433124,30.3483628532467,30.0429599333624,35.9005649081851,31.5266424391358,35.3689060987208,29.6343316053892,29.7268773924762,27.9756474522475,33.6685362994643,31.6755498391545,28.3692909241623,27.4184798923692,25.7195156368704,24.3062329836238,26.4799212614223,24.0949556698771,28.1481080803271,24.484906504812,26.2503788752223,19.7087660277358
|phase1_expression=24.9832201483479,34.1995899486574,35.0349414329943,55.9558790917636,43.5779285053322,31.8970616632591,34.5746708081378,32.0225842135109,25.764336153755,23.6405171585213,23.4568616468942,24.1709641755869,44.1697883222511,34.00653654099,68.6206109340265,45.7594104301007,44.7719602002014,45.8997450596236,51.0065693013348,41.1657962244089,26.788636397587,22.2411730689983,17.2391860831697,25.4387952241517,21.3350631392468,24.6919744569459,21.9688618041128,27.3648465511079,19.7624356234629,16.3819584343955,15.5211357458713,31.7515336729816,33.8285633171514,95.0890086092632,23.6858328196045,16.4572298904907,17.9669033510885,47.7126059040075,25.7840663692854,28.7938059185589,49.4114449946052,54.6436387966757,40.2973593015858,22.4096335996528,20.5795170375615,15.7850206859046,14.0830441982647,8.06693078607652,6.15121311656521,13.9989527333484,7.41928034614421,1.43752564364972,53.6904339384756,71.8108520591231,82.6790745890461,17.7509010864803,28.9398774338144,17.532851137433,31.7636843549569,34.3844136526821,46.2696924559511,6.77689064138264,5.33576877666684,6.74924787961049,15.8218618010716,6.3943210345149,11.085204089181,17.6740420447915,32.1437798156281,23.7610451463776,29.0248446664907,19.4242669394586,20.3199057675484,35.6448225715516,23.4821403994679,46.8801581171111,72.6764814595965,44.179818977475,46.8499926431543,29.938187314754,17.3826522844578,40.1103295328705,26.5223849051312,41.6444331423443,41.7139216430692,40.0694876244188,29.8980529678116,36.5342913817589,11.1317504199781,15.492169821891,37.1026545538148,20.6501730475533,25.8389106808945,31.3027851149934,29.8897152025928,29.1217476613268,26.6844398250329,12.2709832256202,8.05336614268893,13.4269038313929,23.0983208433756,19.2489716121477,38.2207859559969,142.213340630666,32.6901471926933,30.6565437224869,35.3867111510348,30.2587281255509,24.5990989464813,37.7043033224655,19.0833859442749,22.5304453950985,19.832932764021,21.1011696773672,26.692636519805,25.0076516746054,56.1132576757029,24.1480926056252,34.4998115260451,20.3826230933736,33.126227769059,33.4563924663303,46.5979403045305,49.4799546949515,43.3554683103852,28.8666472385708,17.2533779288525,9.59844369589452,15.3754974758408,46.8844701337095,52.1550687213234,42.2198623099224,43.4560800480691,34.7773021969249,35.7395436642443,39.1001443993296,21.1825876808658,33.7142890353352,18.7014841240919,52.820905827505,23.6819206192121,17.2426578325105,22.3277040958633,26.976162392593,27.4867456571365,31.7722026306427,29.9845518591132,54.5864112259323,18.1077114063587,32.7153518690327,29.5597888595434,17.9740500590611,31.4193391624926,27.8601733217733,32.5135775524551,31.4474141573219,19.6619692447706,16.4702660553418,15.6289924667576,16.3629360303046,18.5275587385066,18.0062061461015,19.8865577891577,18.1023093207612,16.0437797402873,17.672579801031,20.1205051049714,17.8650973821769,18.9243827400503,18.5509234409378,22.2939226251103,19.1521983527185,23.7114124514335,22.8150911892632,42.899149507082,40.1327988279209,33.7027158643474,25.6517049663638,29.6470668243975,29.7262939981361,26.288962109707,29.6474781196314,28.6867676559883,31.7676795607974,26.5736274464927,28.6576181219779,33.9302531880364,33.4246873029133,31.1942539390592,22.4704852163555,30.0431889325825,26.6849306160852,11.569741958138,26.6199034380668,29.3040112750009,27.6965805869627,27.9291581521381,26.5113399185404,27.760839797549,26.1269961923896,28.1027722836061,24.9262271122037,29.6452627087149,34.7037819889476,37.3462090715086,33.5044547453432,37.529122456873,34.2471566848432,29.0273471030819,28.4819176076303,21.7261203878547,24.4359657737393,81.9478777205921,26.7941482321322,22.4667124642484,25.2578877947112,22.6040741037609,18.332853811808,39.1676763153202,18.759649765278,26.2373612071662,31.7423310399602,28.3975200429088,29.983620082085,30.4695860334098,29.6603144743854,38.3053400178044,29.2333390336383,30.6153155822375,41.9490085672289,30.5652417902635,37.7534042897745,46.7452980211744,39.1612092349471,43.7670202986942,49.1167408422424,31.4679156376072,32.5848488726325,20.0000633359544,21.7124997395761,24.9251493338843,22.2550084249084,45.6697603193534,36.5622260867405,38.7669692903366,56.0491530961888,33.5992882390162,41.208075965495,39.5287777946523,43.6996990333658,34.349500620401,17.2723635557238,25.5732526185114,37.4482179147656,53.0980553359851,25.734747432428,22.3719432153916,26.7819213253375,22.147641966058,26.1319875752338,28.6855405416725,29.8097658171555,28.5197902707777,25.2829406348653,33.7339547439996,41.2542172992747,27.235168460303,25.7487364464774,12.6771510107099,24.6487590286331,30.5025201864711,23.9014215586775,26.1632942757372,10.0473433207818,28.395276675709,33.8931313382112,35.9461288829588,27.7008904941686,29.7094545120466,27.7439454669517,27.3362667767183,39.8862386380499,36.4351045787313,32.0785772478182,43.0594619610589,23.5281029478074,37.0389054739423,36.7318491159147,45.2457893756593,40.0361803111415,20.5673900292565,18.6135431590465,17.5513966731618,17.184071124272,24.0415355121663,27.8547669963783,24.6252177073707,35.1268337304307,34.2829225081499,28.3215127408123,31.9042339099797,29.3166655022113,31.1075935900303,58.405895430171,23.675103424736,31.0994415771476,22.6678131926224,22.7507890362536,21.6988503442588,23.3159453177274,25.3491635474829,32.5510962109875,38.3785200598102,27.5405897741647,33.1234507196545,61.9381796431229,19.0561702372754,22.2882777047675,26.3739270644924,33.836045481154,33.775830312815,35.5778530579108,37.365450375168,40.2856135293109,41.8375368535949,40.7337787952836,49.8984349387532,44.7385063627532,50.8414524489825,29.4749498699775,43.9532187680648,18.8399098879899,33.2411540400875,30.7171454511183,26.4632290386167,36.8134764777203,40.7299920250225,40.6273404268644,75.1119950680698,43.2705722316746,45.2587455617123,63.7575306495081,44.5303637850917,57.4099362016172,53.3267775183127,57.190792809476,63.8930796667728,58.5069152279557,23.3521532064397,29.5278406316763,25.2685736516119,28.6865926140587,24.105513702218,20.5904729464016,29.1143213420116,28.2268028417285,36.2638706838751,25.5224183881435,29.1501194873776,26.0304351112785,24.8149994795188,25.0978597427088,23.9505905544907,26.6724467118521,24.3357084484197,24.8852894398179,30.0822707586414,31.0589721483578,34.9726637433124,30.3483628532467,30.0429599333624,35.9005649081851,31.5266424391358,35.3689060987208,29.6343316053892,29.7268773924762,27.9756474522475,33.6685362994643,31.6755498391545,28.3692909241623,27.4184798923692,25.7195156368704,24.3062329836238,26.4799212614223,24.0949556698771,28.1481080803271,24.484906504812,26.2503788752223,19.7087660277358
|short_description=p1@Trim33
|short_description=p1@Trim33
}}
}}

Revision as of 18:11, 18 April 2012

Short description:p1@Trim33
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim33_5end
Coexpression cluster:NA
Association with transcript: 421bp_to_ENSMUST00000029444, ENSMUST00000106860, NM_001079830, NM_053170, uc008qsv.1, uc008qsw.1_5end
EntrezGene:Trim33
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim33

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I534.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I635.03
CD326+ enterocyte, pool1.CNhs13542.11848-124I355.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I731.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E623.46
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E444.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E834.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A168.62
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A345.76
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A544.77
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A245.90
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A451.01
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A641.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.24
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D221.34
GP2+ M cell, pool1.CNhs13228.11845-124H924.69
GP2+ M cell, pool2.CNhs13231.11846-124I121.97
GP2+ M cell, pool3.CNhs13240.11847-124I227.36
Ileum epithelium, pool1.CNhs13199.10252-104B919.76
Ileum epithelium, pool2.CNhs13232.10253-104C116.38
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C815.52
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I331.75
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G633.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E995.09
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.69
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F616.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.97
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G847.71
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G949.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H254.64
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H440.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.41
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.58
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A253.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I971.81
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A182.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C117.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E128.94
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.53
Mouse Granule cells, donor1.CNhs12131.11713-123C331.76
Mouse Granule cells, donor2.CNhs12357.11731-123E334.38
Mouse Granule cells, donor3.CNhs12108.11636-122C746.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E715.82
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C811.09
Mouse Microglia, donor2.CNhs12634.11736-123E817.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D532.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.02
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F119.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F223.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D646.88
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D372.68
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F344.18
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D746.85
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D429.94
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.38
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D840.11
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E541.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I641.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.07
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.90
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.53
Mouse Schwann, donor1.CNhs12507.11728-123D911.13
Mouse Schwann, donor2.CNhs12573.11746-123F915.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G337.10
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F720.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C831.30
Mouse hepatocyte, donor6.CNhs13090.11822-124F429.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.12
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A726.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.05
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I838.22
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6142.21
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G132.69
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.39
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B630.26
accessory axillary lymph node, adult.CNhs10475.1063-29H924.60
adrenal gland, adult.CNhs10508.49-24D737.70
adrenal gland, embryo E14.CNhs11038.406-44C519.08
adrenal gland, embryo E16.CNhs11004.1254-43D622.53
adrenal gland, embryo E17.CNhs11043.1263-45I119.83
adrenal gland, embryo E18.CNhs11026.1262-18F521.10
adrenal gland, neonate N00.CNhs11191.1311-23C126.69
adrenal gland, neonate N25.CNhs11223.1377-27I325.01
amnion, adult pregnant day17.5.CNhs10488.583-22A856.11
aorta, adult.CNhs10498.46-23H124.15
bone (os femoris), adult.CNhs10483.56-12G234.50
bone (os femoris), neonate N02.CNhs11227.1985-43F520.38
bone (os femoris), neonate N16.CNhs11225.1525-43A633.13
bone (os femoris), neonate N20.CNhs11195.1350-25C333.46
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B249.48
cerebellum, neonate N30.CNhs11135.1395-42I243.36
colon, adult.CNhs10468.36-18H728.87
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.25
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.38
corpora quadrigemina, adult.CNhs10501.16-22A446.88
corpus striatum, adult.CNhs10487.19-21D852.16
corpus striatum, neonate N00.CNhs11226.630-43F142.22
cortex, adult.CNhs10473.12-14D543.46
cortex, neonate N30.CNhs11107.1392-42F234.78
diencephalon, adult.CNhs10482.20-12F235.74
diencephalon, neonate N30.CNhs11201.1388-42B239.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.71
epididymis, adult.CNhs10490.58-23B218.70
eyeball, adult.CNhs10484.31-12G452.82
eyeball, embryo E12.CNhs11016.345-16C623.68
eyeball, embryo E14.CNhs10521.399-16E217.24
eyeball, embryo E15.CNhs10593.426-16C922.33
eyeball, embryo E17.CNhs11023.1261-18D426.98
eyeball, neonate N00.CNhs11207.633-15C627.49
eyeball, neonate N01.CNhs11140.1532-43E731.77
eyeball, neonate N02.CNhs11205.1551-44G829.98
eyeball, neonate N16.CNhs11188.777-19A254.59
forelimb, embryo E11.CNhs10596.335-25E218.11
forelimb, embryo E12.CNhs10600.359-14H232.72
forelimb, embryo E13.CNhs10589.384-1E229.56
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E731.42
forelimb, embryo E17.CNhs10598.1517-43C427.86
forelimb, embryo E18.CNhs11008.1520-43B532.51
gonad, embryo E13.CNhs11044.1564-45I631.45
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C819.66
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D216.47
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.63
heart, embryo E11.CNhs10586.331-24E916.36
heart, embryo E12.CNhs11015.353-12F518.53
heart, embryo E13.CNhs11013.376-3I918.01
heart, embryo E14.CNhs10597.403-26D419.89
heart, embryo E15.CNhs11017.431-16C818.10
heart, embryo E16.CNhs11021.457-17C616.04
heart, embryo E17.CNhs11025.479-18E517.67
heart, embryo E18.CNhs11030.1283-20G320.12
heart, neonate N00.CNhs11213.639-21E317.87
heart, neonate N03.CNhs11221.1349-25I218.92
heart, neonate N10.CNhs11118.749-24G118.55
heart, neonate N16.CNhs11209.782-15G122.29
heart, neonate N20.CNhs11127.821-26I619.15
heart, neonate N25.CNhs11196.1351-25D323.71
heart, neonate N30.CNhs11202.1390-42D222.82
hippocampus, adult.CNhs10478.13-16E842.90
hippocampus, neonate N00.CNhs11228.627-43G140.13
intestinal mucosa, adult.CNhs10506.860-29I333.70
intestine, adult.CNhs10496.178-9A325.65
intestine, embryo E12.CNhs11019.1251-16I529.65
intestine, embryo E13.CNhs11010.381-16D529.73
intestine, embryo E15.CNhs10602.976-16D826.29
intestine, embryo E16.CNhs10585.463-22H429.65
intestine, embryo E17.CNhs10582.482-18D328.69
intestine, embryo E18.CNhs10526.1289-20F731.77
intestine, neonate N00.CNhs11126.644-26D126.57
intestine, neonate N01.CNhs11192.1322-23E928.66
intestine, neonate N06.CNhs11102.688-20B833.93
intestine, neonate N07.CNhs11095.720-20F233.42
intestine, neonate N10.CNhs11098.755-23A531.19
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E330.04
intestine, neonate N30.CNhs11131.1384-42G126.68
kidney, embryo E14.CNhs10606.411-4I911.57
kidney, embryo E15.CNhs10997.434-16F826.62
kidney, embryo E16.CNhs10584.464-22A529.30
kidney, embryo E17.CNhs11028.483-18I227.70
kidney, embryo E18.CNhs11001.1288-20C727.93
kidney, neonate N00.CNhs11214.646-21G726.51
kidney, neonate N10.CNhs11206.758-6D527.76
kidney, neonate N20.CNhs11113.832-19I126.13
kidney, neonate N25.CNhs11122.1353-25F328.10
kidney, neonate N30.CNhs11203.1385-42H124.93
liver, adult pregnant day01.CNhs10466.508-5B229.65
liver, embryo E12.CNhs10601.355-15F834.70
liver, embryo E13.CNhs10524.378-3H637.35
liver, embryo E14.CNhs10594.409-16E133.50
liver, embryo E15.CNhs10520.433-16D737.53
liver, embryo E16.CNhs10523.462-17F534.25
liver, embryo E17.CNhs10510.481-18A329.03
liver, embryo E18.CNhs10579.499-43G428.48
liver, neonate N00.CNhs11117.641-24F421.73
liver, neonate N03.CNhs11123.1345-25G224.44
liver, neonate N06.CNhs11101.684-20A881.95
liver, neonate N07.CNhs11103.716-20H226.79
liver, neonate N10.CNhs11115.751-24B922.47
liver, neonate N20.CNhs11220.823-25A325.26
liver, neonate N25.CNhs11198.1368-26H122.60
liver, neonate N30.CNhs11106.1382-42D118.33
lung, adult.CNhs10474.28-22B139.17
lung, embryo E12.CNhs10522.354-16G218.76
lung, embryo E14.CNhs10604.404-26F826.24
lung, embryo E15.CNhs11020.432-17C531.74
lung, embryo E16.CNhs10998.458-17B628.40
lung, embryo E17.CNhs10605.480-44A629.98
lung, embryo E18.CNhs10583.1287-20I630.47
lung, neonate N00.CNhs11224.640-42C629.66
lung, neonate N06.CNhs11212.683-20E538.31
lung, neonate N07.CNhs11111.715-19A329.23
lung, neonate N10.CNhs11219.750-23E630.62
lung, neonate N20.CNhs11109.822-18A441.95
lung, neonate N25.CNhs11119.1359-25C730.57
lung, neonate N30.CNhs11133.1394-42H237.75
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A146.75
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A139.16
mammary gland, adult lactating day02.CNhs10480.595-22B643.77
mammary gland, adult pregnant day19.CNhs10476.588-5H249.12
medulla oblongata, adult.CNhs10477.17-12C231.47
medulla oblongata, neonate N30.CNhs11200.1396-42A332.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.71
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E222.26
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E345.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D736.56
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D838.77
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D956.05
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D433.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D541.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D639.53
olfactory brain, adult.CNhs10489.18-22I943.70
ovary, adult.CNhs10507.91-2I734.35
ovary, embryo E18.CNhs11040.505-44H717.27
ovary, neonate N00.CNhs11217.1299-22I425.57
oviduct, adult pregnant day01.CNhs10500.988-6G637.45
pancreas, adult.CNhs10486.34-16E453.10
pancreas, embryo E14.CNhs11012.405-44F425.73
pancreas, embryo E15.CNhs11042.1556-45F222.37
pancreas, embryo E16.CNhs11003.460-26E526.78
pancreas, embryo E17.CNhs10599.1558-45G322.15
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G928.69
pancreas, neonate N01.CNhs11138.1531-43D729.81
pancreas, neonate N02.CNhs11139.1539-43D828.52
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H541.25
pituitary gland, adult.CNhs10493.21-1G827.24
pituitary gland, embryo E12.CNhs11018.346-16E625.75
pituitary gland, embryo E13.CNhs11009.370-44C712.68
pituitary gland, embryo E14.CNhs11037.398-44A524.65
pituitary gland, embryo E15.CNhs10592.427-16B930.50
pituitary gland, embryo E16.CNhs11036.449-43F623.90
pituitary gland, embryo E17.CNhs11039.1265-44F526.16
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I728.40
placenta, adult pregnant day17.CNhs10464.577-18G333.89
prostate, adult.CNhs10470.859-1F835.95
skin, adult.CNhs10492.30-1C327.70
skin, neonate N00.CNhs11124.650-25G429.71
skin, neonate N03.CNhs11215.662-22H327.74
skin, neonate N06.CNhs11097.693-20I527.34
skin, neonate N10.CNhs11108.762-6C439.89
small intestine, neonate N16.CNhs11114.790-21I136.44
spinal cord, adult.CNhs10505.24-13C932.08
spleen, adult.CNhs10465.25-2G243.06
spleen, embryo E16.CNhs11035.461-43C123.53
spleen, embryo E18.CNhs11011.1271-21F237.04
spleen, neonate N10.CNhs11116.752-24D136.73
spleen, neonate N20.CNhs11112.824-19H145.25
spleen, neonate N25.CNhs11099.1354-25G340.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C918.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.55
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E324.04
stomach, embryo E15.CNhs10603.1252-16G827.85
stomach, embryo E16.CNhs11022.459-17D424.63
stomach, embryo E17.CNhs11006.1035-18D535.13
stomach, embryo E18.CNhs10999.1286-20C634.28
stomach, neonate N03.CNhs11193.1340-24B828.32
stomach, neonate N07.CNhs11210.718-18A931.90
stomach, neonate N25.CNhs11104.1355-25E429.32
stomach, neonate N30.CNhs11134.1386-42I131.11
submandibular gland, adult.CNhs10469.59-29C158.41
testis, adult.CNhs10504.57-7G523.68
testis, embryo E13.CNhs11031.389-23F531.10
testis, embryo E15.CNhs11034.443-27C522.67
testis, embryo E16.CNhs11033.470-26G522.75
testis, embryo E17.CNhs11029.486-18I521.70
testis, embryo E18.CNhs11027.503-18G523.32
testis, neonate N00.CNhs11189.1300-22B725.35
testis, neonate N07.CNhs11222.726-26I432.55
testis, neonate N10.CNhs11204.763-44D938.38
testis, neonate N20.CNhs11110.839-18H327.54
testis, neonate N30.CNhs11130.1391-42E233.12
thymus, adult.CNhs10471.38-12B561.94
thymus, embryo E14.CNhs11041.402-44I419.06
thymus, embryo E15.CNhs11005.430-45I222.29
thymus, embryo E16.CNhs11002.456-26C526.37
thymus, embryo E17.CNhs10581.478-18C133.84
thymus, embryo E18.CNhs10595.1273-19G433.78
thymus, neonate N02.CNhs11181.1541-43F835.58
thymus, neonate N03.CNhs11137.2104-43C737.37
thymus, neonate N06.CNhs11197.681-26C440.29
thymus, neonate N07.CNhs11211.713-19D341.84
thymus, neonate N10.CNhs11194.748-24E440.73
thymus, neonate N20.CNhs11186.820-7A249.90
thymus, neonate N25.CNhs11125.1362-25G744.74
thymus, neonate N30.CNhs11132.1393-42G250.84
tongue, adult.CNhs10499.32-1B429.47
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H343.95
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F718.84
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G533.24
urinary bladder, adult.CNhs10481.879-12E430.72
uterus, adult pregnant day19.CNhs10497.590-15F526.46
uterus, adult.CNhs10509.92-27E536.81
vagina, adult.CNhs10502.89-27D540.73
vesicular gland, adult.CNhs10491.51-27F840.63
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A175.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A243.27
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A345.26
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D763.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A444.53
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A557.41
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A653.33
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A757.19
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A863.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A958.51
whole body, embryo E11.CNhs11014.324-5I823.35
whole body, embryo E12.CNhs10587.857-27C929.53
whole body, embryo E13.CNhs10512.372-23H225.27
whole body, embryo E14.5.CNhs10578.420-27D228.69
whole body, embryo E14.CNhs10519.395-14B124.11
whole body, embryo E16.CNhs10514.453-14F220.59
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.23
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G536.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G529.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G524.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G525.10
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G523.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G526.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.53
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G529.63
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G533.67
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G531.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.37
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G525.72
whole body, embryo E17.5.CNhs10513.490-9F924.31
whole body, embryo E17.CNhs10517.475-3I526.48
whole body, embryo E18.CNhs10516.493-3B324.09
whole body, neonate N00.CNhs10525.657-19C228.15
whole body, neonate N01.CNhs10576.659-23C624.48
whole body, neonate N06.CNhs10515.692-21D126.25
whole body, neonate N10.CNhs10518.761-6B419.71





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:103083637..103083703,%2B&oldid=928409"