FFCP PHASE1:Mm9::chr10:12728340..12728353,+: Difference between revisions
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|id=chr10:12728340..12728353,+ | |id=chr10:12728340..12728353,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.52e-14!44;CL:0000133!3.52e-14!44;CL:0002319!8.71e-14!43;CL:0000055!1.14e-12!50;CL:0000540!9.03e-12!33;CL:0000047!9.03e-12!33;CL:0000031!9.03e-12!33;CL:0000404!9.03e-12!33;CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39;CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23;CL:0000548!3.35e-09!115;CL:0000004!3.35e-09!115;CL:0000255!3.35e-09!115;CL:0000723!3.86e-09!91;CL:0000048!3.86e-09!91;CL:0000144!1.09e-08!121;CL:0000012!1.09e-08!121;CL:0000034!1.77e-08!97;CL:0002371!1.83e-08!118;CL:0002321!1.33e-07!70;CL:0000220!1.33e-07!70 | |ontology_enrichment_celltype=CL:0000221!3.52e-14!44;CL:0000133!3.52e-14!44;CL:0002319!8.71e-14!43;CL:0000055!1.14e-12!50;CL:0000540!9.03e-12!33;CL:0000047!9.03e-12!33;CL:0000031!9.03e-12!33;CL:0000404!9.03e-12!33;CL:0000393!1.60e-11!39;CL:0000211!1.60e-11!39;CL:0000117!1.34e-10!23;CL:0000337!1.34e-10!23;CL:0000548!3.35e-09!115;CL:0000004!3.35e-09!115;CL:0000255!3.35e-09!115;CL:0000723!3.86e-09!91;CL:0000048!3.86e-09!91;CL:0000144!1.09e-08!121;CL:0000012!1.09e-08!121;CL:0000034!1.77e-08!97;CL:0002371!1.83e-08!118;CL:0002321!1.33e-07!70;CL:0000220!1.33e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.86e-14,44;CL:0000133,1.86e-14,44;CL:0002319,4.70e-14,43;CL:0000540,5.40e-12,33;CL:0000047,5.40e-12,33;CL:0000031,5.40e-12,33;CL:0000404,5.40e-12,33;CL:0000393,1.43e-11,39;CL:0000211,1.43e-11,39;CL:0000117,8.49e-11,23;CL:0000337,8.49e-11,23;CL:0000723,4.43e-09,91;CL:0000048,4.43e-09,91;CL:0000034,1.92e-08,97;CL:0002321,3.93e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.61e-27!73;UBERON:0005743!1.61e-27!73;UBERON:0000073!7.51e-27!75;UBERON:0001016!7.51e-27!75;UBERON:0001049!1.70e-20!52;UBERON:0005068!1.70e-20!52;UBERON:0006241!1.70e-20!52;UBERON:0007135!1.70e-20!52;UBERON:0000955!4.81e-20!50;UBERON:0006238!4.81e-20!50;UBERON:0002616!1.21e-19!49;UBERON:0004121!4.19e-18!102;UBERON:0000924!4.19e-18!102;UBERON:0006601!4.19e-18!102;UBERON:0002020!2.27e-17!34;UBERON:0003080!1.16e-16!40;UBERON:0002346!2.51e-16!71;UBERON:0003075!2.51e-16!71;UBERON:0007284!2.51e-16!71;UBERON:0002780!4.78e-16!39;UBERON:0001890!4.78e-16!39;UBERON:0006240!4.78e-16!39;UBERON:0000033!7.77e-16!63;UBERON:0002791!3.03e-15!29;UBERON:0003528!3.03e-15!29;UBERON:0001893!3.03e-15!29;UBERON:0003056!7.25e-14!49;UBERON:0007811!4.97e-12!86;UBERON:0000956!5.77e-12!21;UBERON:0001869!5.77e-12!21;UBERON:0000203!5.77e-12!21;UBERON:0000153!1.69e-11!94;UBERON:0002619!2.91e-10!17;UBERON:0002021!4.26e-08!10;UBERON:0000411!4.26e-08!10;UBERON:0001950!4.26e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!1.61e-27!73;UBERON:0005743!1.61e-27!73;UBERON:0000073!7.51e-27!75;UBERON:0001016!7.51e-27!75;UBERON:0001049!1.70e-20!52;UBERON:0005068!1.70e-20!52;UBERON:0006241!1.70e-20!52;UBERON:0007135!1.70e-20!52;UBERON:0000955!4.81e-20!50;UBERON:0006238!4.81e-20!50;UBERON:0002616!1.21e-19!49;UBERON:0004121!4.19e-18!102;UBERON:0000924!4.19e-18!102;UBERON:0006601!4.19e-18!102;UBERON:0002020!2.27e-17!34;UBERON:0003080!1.16e-16!40;UBERON:0002346!2.51e-16!71;UBERON:0003075!2.51e-16!71;UBERON:0007284!2.51e-16!71;UBERON:0002780!4.78e-16!39;UBERON:0001890!4.78e-16!39;UBERON:0006240!4.78e-16!39;UBERON:0000033!7.77e-16!63;UBERON:0002791!3.03e-15!29;UBERON:0003528!3.03e-15!29;UBERON:0001893!3.03e-15!29;UBERON:0003056!7.25e-14!49;UBERON:0007811!4.97e-12!86;UBERON:0000956!5.77e-12!21;UBERON:0001869!5.77e-12!21;UBERON:0000203!5.77e-12!21;UBERON:0000153!1.69e-11!94;UBERON:0002619!2.91e-10!17;UBERON:0002021!4.26e-08!10;UBERON:0000411!4.26e-08!10;UBERON:0001950!4.26e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-28,73;UBERON:0001016,2.09e-27,75;UBERON:0000073,2.05e-22,54;UBERON:0001049,6.54e-21,52;UBERON:0005068,6.54e-21,52;UBERON:0006241,6.54e-21,52;UBERON:0007135,6.54e-21,52;UBERON:0004121,3.42e-20,95;UBERON:0000924,3.42e-20,95;UBERON:0006601,3.42e-20,95;UBERON:0002346,8.59e-19,64;UBERON:0003075,8.59e-19,64;UBERON:0007284,8.59e-19,64;UBERON:0000955,1.13e-18,47;UBERON:0006238,1.13e-18,47;UBERON:0002616,2.85e-18,46;UBERON:0002020,1.02e-17,34;UBERON:0003080,5.43e-17,40;UBERON:0002780,2.30e-16,39;UBERON:0001890,2.30e-16,39;UBERON:0006240,2.30e-16,39;UBERON:0010371,4.16e-16,73;UBERON:0003528,1.52e-15,29;UBERON:0002791,1.52e-15,29;UBERON:0001893,1.52e-15,29;UBERON:0003056,4.15e-14,49;UBERON:0000956,3.42e-12,21;UBERON:0001869,3.42e-12,21;UBERON:0000203,3.42e-12,21;UBERON:0002619,1.87e-10,17;UBERON:0010314,2.52e-10,92;UBERON:0002021,3.06e-08,10;UBERON:0000411,3.06e-08,10;UBERON:0001950,3.06e-08,10 | |||
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| ||
|short_description=p3@Sf3b5 | |short_description=p3@Sf3b5 | ||
}} | }} |
Revision as of 06:47, 15 November 2012
Short description: | p3@Sf3b5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sf3b5_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_ENSMUST00000105139, NM_175102, uc007eki.2_5end |
EntrezGene: | Sf3b5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.86e-14 | 44 |
neurectodermal cell | 1.86e-14 | 44 |
neural cell | 4.70e-14 | 43 |
neuron | 5.40e-12 | 33 |
neuronal stem cell | 5.40e-12 | 33 |
neuroblast | 5.40e-12 | 33 |
electrically signaling cell | 5.40e-12 | 33 |
electrically responsive cell | 1.43e-11 | 39 |
electrically active cell | 1.43e-11 | 39 |
CNS neuron (sensu Vertebrata) | 8.49e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.49e-11 | 23 |
somatic stem cell | 4.43e-09 | 91 |
multi fate stem cell | 4.43e-09 | 91 |
stem cell | 1.92e-08 | 97 |
embryonic cell | 3.93e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.34e-28 | 73 |
nervous system | 2.09e-27 | 75 |
regional part of nervous system | 2.05e-22 | 54 |
neural tube | 6.54e-21 | 52 |
neural rod | 6.54e-21 | 52 |
future spinal cord | 6.54e-21 | 52 |
neural keel | 6.54e-21 | 52 |
ectoderm-derived structure | 3.42e-20 | 95 |
ectoderm | 3.42e-20 | 95 |
presumptive ectoderm | 3.42e-20 | 95 |
neurectoderm | 8.59e-19 | 64 |
neural plate | 8.59e-19 | 64 |
presumptive neural plate | 8.59e-19 | 64 |
brain | 1.13e-18 | 47 |
future brain | 1.13e-18 | 47 |
regional part of brain | 2.85e-18 | 46 |
gray matter | 1.02e-17 | 34 |
anterior neural tube | 5.43e-17 | 40 |
regional part of forebrain | 2.30e-16 | 39 |
forebrain | 2.30e-16 | 39 |
future forebrain | 2.30e-16 | 39 |
ecto-epithelium | 4.16e-16 | 73 |
brain grey matter | 1.52e-15 | 29 |
regional part of telencephalon | 1.52e-15 | 29 |
telencephalon | 1.52e-15 | 29 |
pre-chordal neural plate | 4.15e-14 | 49 |
cerebral cortex | 3.42e-12 | 21 |
cerebral hemisphere | 3.42e-12 | 21 |
pallium | 3.42e-12 | 21 |
regional part of cerebral cortex | 1.87e-10 | 17 |
structure with developmental contribution from neural crest | 2.52e-10 | 92 |
occipital lobe | 3.06e-08 | 10 |
visual cortex | 3.06e-08 | 10 |
neocortex | 3.06e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.