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(Created page with "{{DOID |id=DOID:3904 |name=bronchogenic carcinoma |namespace= |def= |xref= |is_a=DOID:1325 |synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];...")
 
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|id=DOID:3904
|id=DOID:3904
|name=bronchogenic carcinoma
|name=bronchogenic carcinoma
|namespace=
|namespace=disease_ontology
|def=
|def=
|xref=
|xref=MSH:D002283;;NCI:C35875;;SNOMEDCT_2010_1_31:154485001;;SNOMEDCT_2010_1_31:254622008;;SNOMEDCT_2010_1_31:269561006;;SNOMEDCT_2010_1_31:363493006;;UMLS_CUI:C0007121
|is_a=DOID:1325
|is_a=DOID:1325
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
|synonym="BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008];;"bronchial cancer" EXACT [CSP2005:2017-5516];;"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875];;"bronchogenic carcinoma" EXACT [CSP2005:2017-6052];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001];;"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006];;"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]
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|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 14:00, 11 June 2012

Name:bronchogenic carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D002283
NCI:C35875
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:254622008
SNOMEDCT_2010_1_31:269561006
SNOMEDCT_2010_1_31:363493006

UMLS_CUI:C0007121
Synonyms: "BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008]
"bronchial cancer" EXACT [CSP2005:2017-5516]
"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875]
"bronchogenic carcinoma" EXACT [CSP2005:2017-6052]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:DOID:1325(bronchus cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3904 (bronchogenic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.78e-29FFCP PHASE2:Hg19::chr16:7411388..7411391,+#_39df5efeecaef77fad20cc2f4b578036p@chr16:7411388..7411391, +
1.78e-29FFCP PHASE2:Hg19::chr11:41519057..41519065,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:41519057..41519065, -
1.78e-29FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:97961449..97961460, -
1.78e-29FFCP PHASE1:Hg19::chr5:146890999..146891017,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:146890999..146891017, -
1.78e-29FFCP PHASE1:Hg19::chr2:238385078..238385087,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:238385078..238385087, -
1.78e-29FFCP PHASE2:Hg19::chr14:57021818..57021822,+#_39df5efeecaef77fad20cc2f4b578036p@chr14:57021818..57021822, +
1.78e-29FFCP PHASE1:Hg19::chr7:79839919..79839924,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:79839919..79839924, +
1.78e-29FFCP PHASE1:Hg19::chr14:36536932..36536937,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:36536932..36536937, -
1.78e-29FFCP PHASE1:Hg19::chr12:84664700..84664710,+#_39df5efeecaef77fad20cc2f4b578036p1@ENST00000547882
1.78e-29FFCP PHASE2:Hg19::chr15:97554594..97554599,-#_39df5efeecaef77fad20cc2f4b578036p@chr15:97554594..97554599, -
1.78e-29FFCP PHASE1:Hg19::chr1:168756151..168756165,+#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000420691
1.78e-29FFCP PHASE2:Hg19::chr8:85893922..85893940,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:85893922..85893940, +
1.78e-29FFCP PHASE2:Hg19::chr2:97626588..97626595,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626588..97626595, -
1.78e-29FFCP PHASE2:Hg19::chr14:60194459..60194462,-#_39df5efeecaef77fad20cc2f4b578036p43@RTN1
1.78e-29FFCP PHASE1:Hg19::chr2:103235120..103235130,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:103235120..103235130, +
1.78e-29FFCP PHASE1:Hg19::chr19:46763803..46763808,-#_39df5efeecaef77fad20cc2f4b578036p@chr19:46763803..46763808, -
1.78e-29FFCP PHASE1:Hg19::chr17:79974020..79974025,+#_39df5efeecaef77fad20cc2f4b578036p@chr17:79974020..79974025, +
1.78e-29FFCP PHASE2:Hg19::chr9:9763035..9763040,-#_39df5efeecaef77fad20cc2f4b578036p@chr9:9763035..9763040, -
1.78e-29FFCP PHASE2:Hg19::chr6:998859..998863,-#_39df5efeecaef77fad20cc2f4b578036p@chr6:998859..998863, -
1.78e-29FFCP PHASE2:Hg19::chr4:3344577..3344588,+#_39df5efeecaef77fad20cc2f4b578036p@chr4:3344577..3344588, +
1.78e-29FFCP PHASE1:Hg19::chr9:17457123..17457129,+#_39df5efeecaef77fad20cc2f4b578036p@chr9:17457123..17457129, +
1.78e-29FFCP PHASE1:Hg19::chr8:82275651..82275662,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:82275651..82275662, +
1.78e-29FFCP PHASE1:Hg19::chr2:97626550..97626562,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626550..97626562, -
1.78e-29FFCP PHASE2:Hg19::chr10:129704382..129704389,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704382..129704389, +
1.78e-29FFCP PHASE1:Hg19::chr10:129704562..129704569,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704562..129704569, +
1.78e-29FFCP PHASE1:Hg19::chr14:25326297..25326305,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:25326297..25326305, -
1.78e-29FFCP PHASE2:Hg19::chr6:31681859..31681865,-#_39df5efeecaef77fad20cc2f4b578036p3@LY6G6E
1.78e-29FFCP PHASE2:Hg19::chr12:46124855..46124858,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:46124855..46124858, +
1.78e-29FFCP PHASE2:Hg19::chr6:129513919..129513922,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:129513919..129513922, +
1.78e-29FFCP PHASE1:Hg19::chr12:133040060..133040064,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:133040060..133040064, +
1.78e-29FFCP PHASE2:Hg19::chr2:97626065..97626084,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97626065..97626084, -
1.78e-29FFCP PHASE2:Hg19::chr13:76549637..76549662,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76549637..76549662, +
1.78e-29FFCP PHASE2:Hg19::chr10:65821760..65821780,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:65821760..65821780, +
1.78e-29FFCP PHASE1:Hg19::chr2:202413051..202413061,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:202413051..202413061, -
1.78e-29FFCP PHASE2:Hg19::chr3:86289712..86289720,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:86289712..86289720, +
1.78e-29FFCP PHASE2:Hg19::chr18:37420947..37420953,+#_39df5efeecaef77fad20cc2f4b578036p@chr18:37420947..37420953, +
1.78e-29FFCP PHASE1:Hg19::chr20:45418126..45418131,-#_39df5efeecaef77fad20cc2f4b578036p@chr20:45418126..45418131, -
1.78e-29FFCP PHASE2:Hg19::chr8:98075951..98075959,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98075951..98075959, -
1.78e-29FFCP PHASE2:Hg19::chr5:28572013..28572023,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:28572013..28572023, -
1.78e-29FFCP PHASE2:Hg19::chr2:241625540..241625541,+#_39df5efeecaef77fad20cc2f4b578036p14@ENST00000407635
1.78e-29FFCP PHASE1:Hg19::chr19:54024499..54024503,+#_39df5efeecaef77fad20cc2f4b578036p48@ZNF331
1.78e-29FFCP PHASE2:Hg19::chrX:135761853..135761876,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:135761853..135761876, -
1.78e-29FFCP PHASE2:Hg19::chr7:120378742..120378768,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:120378742..120378768, -
1.78e-29FFCP PHASE1:Hg19::chr13:76694533..76694542,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76694533..76694542, +
1.78e-29FFCP PHASE2:Hg19::chr14:36966895..36966899,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:36966895..36966899, -
1.78e-29FFCP PHASE2:Hg19::chr12:84664736..84664743,+#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chr2:138685510..138685520,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:138685510..138685520, -
1.78e-29FFCP PHASE1:Hg19::chr10:129703363..129703373,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129703363..129703373, +
1.78e-29FFCP PHASE1:Hg19::chr18:37331745..37331763,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:37331745..37331763, -
1.78e-29FFCP PHASE2:Hg19::chr9:129234745..129234747,-#_39df5efeecaef77fad20cc2f4b578036p@chr9:129234745..129234747, -
1.78e-29FFCP PHASE2:Hg19::chr6:23637684..23637686,-#_39df5efeecaef77fad20cc2f4b578036p@chr6:23637684..23637686, -
1.78e-29FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_39df5efeecaef77fad20cc2f4b578036p@chr15:85564362..85564385, +
1.78e-29FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98070371..98070384, -
1.78e-29FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:154858754..154858762, +
1.78e-29FFCP PHASE1:Hg19::chr5:28571958..28571968,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:28571958..28571968, -
1.78e-29FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:220695661..220695670, +
1.78e-29FFCP PHASE2:Hg19::chr2:130564567..130564572,-#_39df5efeecaef77fad20cc2f4b578036p2@LOC100131048
1.78e-29FFCP PHASE1:Hg19::chr2:192805239..192805246,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:192805239..192805246, +
1.78e-29FFCP PHASE2:Hg19::chr7:26590606..26590616,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590606..26590616, -
1.78e-29FFCP PHASE2:Hg19::chr18:28978481..28978484,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:28978481..28978484, -
1.78e-29FFCP PHASE2:Hg19::chr13:76694533..76694542,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76694533..76694542, +
1.78e-29FFCP PHASE2:Hg19::chr8:98015305..98015315,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98015305..98015315, -
1.78e-29FFCP PHASE2:Hg19::chr8:139510692..139510697,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:139510692..139510697, -
1.78e-29FFCP PHASE2:Hg19::chr3:115898365..115898379,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:115898365..115898379, +
1.78e-29FFCP PHASE2:Hg19::chr14:89802926..89802934,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:89802926..89802934, -
1.78e-29FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:72938203..72938230, +
1.78e-29FFCP PHASE1:Hg19::chr6:125547084..125547089,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:125547084..125547089, +
1.78e-29FFCP PHASE1:Hg19::chr2:97625602..97625628,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97625602..97625628, -
1.78e-29FFCP PHASE1:Hg19::chr2:222160774..222160804,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:222160774..222160804, +
1.78e-29FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590563..26590574, -

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