DOID:299: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:299
|name=adenocarcinoma
|namespace=
|def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which orig...") |
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|id=DOID:299 | |id=DOID:299 | ||
|name=adenocarcinoma | |name=adenocarcinoma | ||
|namespace= | |namespace=disease_ontology | ||
|def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma] | |def="A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma] | ||
|xref= | |xref=MSH:D000230;;NCI:C2852;;SNOMEDCT_2010_1_31:189578007;;SNOMEDCT_2010_1_31:189582009;;SNOMEDCT_2010_1_31:35917007;;SNOMEDCT_2010_1_31:443961001;;UMLS_CUI:C0001418 | ||
|is_a=DOID:305 | |is_a=DOID:305 | ||
|synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007] | |synonym="adenocarcinoma" EXACT [NCI2004_11_17:C2852];;"adenocarcinoma" EXACT [CSP2005:2000-0386];;"adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009];;"adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007];;"adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007] | ||
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|located_in= | |located_in= | ||
|part_of= | |part_of= | ||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|is_obsolete= | |||
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}} | }} | ||
Revision as of 14:00, 11 June 2012
| Name: | adenocarcinoma | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Definition: | "A carcinoma that has_material_basis_in abnormally proliferating cells, derives_from epithelial cells, which originate in glandular tissue." [url:http\://en.wikipedia.org/wiki/Adenocarcinoma] | ||
| Xrefs: |
| ||
| Synonyms: |
"adenocarcinoma" EXACT [NCI2004_11_17:C2852] "adenocarcinoma" EXACT [CSP2005:2000-0386] "adenocarcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189582009] "adenocarcinoma, no subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:35917007] "adenocarcinomas" EXACT [SNOMEDCT_2005_07_31:189578007] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:305(carcinoma) |
|---|
Children
| is a: | DOID:3030 (mucinous adenocarcinoma),DOID:3111 (cystadenocarcinoma),DOID:3112 (papillary adenocarcinoma),DOID:3493 (signet ring cell adenocarcinoma),DOID:4468 (clear cell adenocarcinoma),DOID:4929 (tubular adenocarcinoma) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10472-106I4
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10483-107A6 (signet ring carcinoma cell line:NUGC-4)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10500-107C5
... further results Mouse (Mus musculus)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)
- 10420-106C6 (colon carcinoma cell line:COLO-320)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10437-106E5 (papillary adenocarcinoma cell line:8505C)
- 10472-106I4
- 10482-107A5 (breast carcinoma cell line:MCF7)
- 10483-107A6 (signet ring carcinoma cell line:NUGC-4)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10500-107C5
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:299 (adenocarcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.16e-42 | FFCP PHASE1:Hg19::chr3:5740617..5740629,+#_24fe9e22f1590996caf18b5da809cac1 | p@chr3:5740617..5740629, + |
| 8.16e-42 | FFCP PHASE2:Hg19::chr3:5740617..5740629,+#_24fe9e22f1590996caf18b5da809cac1 | p@chr3:5740617..5740629, + |
| 8.61e-42 | FFCP PHASE1:Hg19::chr3:5741033..5741062,-#_cd0949b1e4c5312b1614e829f44b85bc | p@chr3:5741033..5741062, - |
| 8.61e-42 | FFCP PHASE2:Hg19::chr3:5741033..5741062,-#_cd0949b1e4c5312b1614e829f44b85bc | p@chr3:5741033..5741062, - |
| 2.93e-33 | FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_92fece98367533e9d68bebdc8a2e0f35 | p@chr6:75178505..75178516, + |
| 2.93e-33 | FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_92fece98367533e9d68bebdc8a2e0f35 | p@chr6:75178505..75178516, + |
| 3.43e-33 | FFCP PHASE1:Hg19::chr4:111532491..111532504,+#_77c1289477423cf21170f3a192cc8761 | p@chr4:111532491..111532504, + |
| 3.43e-33 | FFCP PHASE2:Hg19::chr4:111532491..111532504,+#_77c1289477423cf21170f3a192cc8761 | p@chr4:111532491..111532504, + |
| 2.66e-32 | FFCP PHASE2:Hg19::chr11:2114486..2114508,-#_ccfaa8c5fda36cb58c001dac71120197 | p@chr11:2114486..2114508, - |
| 2.66e-32 | FFCP PHASE1:Hg19::chr11:2114486..2114508,-#_ccfaa8c5fda36cb58c001dac71120197 | p@chr11:2114486..2114508, - |
| 2.42e-29 | FFCP PHASE1:Hg19::chr15:33359086..33359124,+#_feb7db58dd76fde384a66fcf6ab5f7c0 | p@chr15:33359086..33359124, + |
| 2.42e-29 | FFCP PHASE2:Hg19::chr15:33359086..33359124,+#_feb7db58dd76fde384a66fcf6ab5f7c0 | p@chr15:33359086..33359124, + |
| 1.35e-28 | FFCP PHASE2:Hg19::chr7:960521..960533,-#_82a91b2931f960827092189cf0c91fba | p15@ADAP1 |
| 1.35e-28 | FFCP PHASE1:Hg19::chr7:960521..960533,-#_82a91b2931f960827092189cf0c91fba | p15@ADAP1 |
| 1.9e-28 | FFCP PHASE1:Hg19::chr12:4136920..4136943,+#_0c7ee99fd3bc48f76bb1a291c5766c41 | p@chr12:4136920..4136943, + |
| 1.9e-28 | FFCP PHASE2:Hg19::chr12:4136920..4136943,+#_0c7ee99fd3bc48f76bb1a291c5766c41 | p@chr12:4136920..4136943, + |
| 4.47e-27 | FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_4471df4b618c55bd43f1d3d837517b07 | p8@PAX8 |
| 4.47e-27 | FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_4471df4b618c55bd43f1d3d837517b07 | p8@PAX8 |
| 5.75e-26 | FFCP PHASE1:Hg19::chr6:18497083..18497107,+#_dc716ee4ecc59a3c69ca0c7f13530c98 | p@chr6:18497083..18497107, + |
| 5.75e-26 | FFCP PHASE2:Hg19::chr6:18497083..18497107,+#_dc716ee4ecc59a3c69ca0c7f13530c98 | p@chr6:18497083..18497107, + |
| 6.54e-26 | FFCP PHASE2:Hg19::chr17:55185128..55185169,+#_316ba123bf83551533f5ce5758d8bcc8 | p@chr17:55185128..55185169, + |
| 6.54e-26 | FFCP PHASE1:Hg19::chr17:55185128..55185169,+#_316ba123bf83551533f5ce5758d8bcc8 | p@chr17:55185128..55185169, + |
| 6.54e-26 | FFCP PHASE2:Hg19::chr13:37363331..37363344,-#_316ba123bf83551533f5ce5758d8bcc8 | p@chr13:37363331..37363344, - |
| 6.54e-26 | FFCP PHASE1:Hg19::chr13:37363331..37363344,-#_316ba123bf83551533f5ce5758d8bcc8 | p@chr13:37363331..37363344, - |
| 6.59e-26 | FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_a4a8d31702189c3440d2437a306f3ee0 | p@chr2:113981834..113981850, - |
| 6.59e-26 | FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_a4a8d31702189c3440d2437a306f3ee0 | p@chr2:113981834..113981850, - |
| 6.98e-26 | FFCP PHASE2:Hg19::chr19:51472686..51472697,-#_68ad9d2d544c204fab291b630638c219 | p@chr19:51472686..51472697, - |
| 6.98e-26 | FFCP PHASE1:Hg19::chr19:51472686..51472697,-#_68ad9d2d544c204fab291b630638c219 | p@chr19:51472686..51472697, - |
| 1.11e-25 | FFCP PHASE2:Hg19::chr19:51471909..51471917,-#_5677f6916cab9c8fe2587e8f746ff0db | p10@KLK6 |
| 1.11e-25 | FFCP PHASE1:Hg19::chr19:51471909..51471917,-#_5677f6916cab9c8fe2587e8f746ff0db | p10@KLK6 |
| 4.73e-25 | FFCP PHASE2:Hg19::chr7:960507..960519,-#_094c691c45f9e9e6916f89ed47399505 | p9@ADAP1 |
| 4.73e-25 | FFCP PHASE1:Hg19::chr7:960507..960519,-#_094c691c45f9e9e6916f89ed47399505 | p9@ADAP1 |
| 5.36e-25 | FFCP PHASE2:Hg19::chr1:206288186..206288203,-#_d69fadf87b34226980b6598c606460a2 | p1@C1orf186 |
| 5.36e-25 | FFCP PHASE1:Hg19::chr1:206288186..206288203,-#_d69fadf87b34226980b6598c606460a2 | p1@C1orf186 |
| 7.06e-25 | FFCP PHASE2:Hg19::chr16:2031433..2031447,-#_61469681b1b6a10c485957f49309ef7e | p2@NOXO1 |
| 7.06e-25 | FFCP PHASE1:Hg19::chr16:2031433..2031447,-#_61469681b1b6a10c485957f49309ef7e | p2@NOXO1 |
| 8.15e-25 | FFCP PHASE1:Hg19::chr1:55352248..55352260,+#_44c39ba981e27fef9e66e85c01540af1 | p1@ENST00000415336 |
| 8.15e-25 | FFCP PHASE2:Hg19::chr1:55352248..55352260,+#_44c39ba981e27fef9e66e85c01540af1 | p1@ENST00000415336 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr9:83986187..83986191,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr9:83986187..83986191, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr9:130913151..130913159,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr9:130913151..130913159, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr6:18496965..18496969,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr6:18496965..18496969, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr7:960534..960548,-#_941425c9ead95a02a02e2f83ac361f96 | p16@ADAP1 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:8904309..8904317,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:8904309..8904317, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr11:85539944..85539950,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr11:85539944..85539950, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr21:41755024..41755027,+#_941425c9ead95a02a02e2f83ac361f96 | p2@DSCAM-AS1 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:19498568..19498573,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498568..19498573, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:19498507..19498511,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498507..19498511, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:9012128..9012139,+#_941425c9ead95a02a02e2f83ac361f96 | p2@ENST00000456526 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr9:130913135..130913143,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr9:130913135..130913143, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr19:1753387..1753395,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr19:1753387..1753395, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr6:125589278..125589288,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr6:125589278..125589288, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:19498407..19498415,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498407..19498415, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr21:41711178..41711186,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr21:41711178..41711186, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:8910201..8910211,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:8910201..8910211, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr7:34890932..34890934,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr7:34890932..34890934, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr16:75511082..75511090,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr16:75511082..75511090, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:8904309..8904317,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:8904309..8904317, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr7:960494..960498,-#_941425c9ead95a02a02e2f83ac361f96 | p19@ADAP1 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr21:41755185..41755210,+#_941425c9ead95a02a02e2f83ac361f96 | p1@DSCAM-AS1 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr17:38843592..38843605,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr17:38843592..38843605, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:19498541..19498551,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498541..19498551, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr9:83986187..83986191,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr9:83986187..83986191, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr7:960422..960430,-#_941425c9ead95a02a02e2f83ac361f96 | p20@ADAP1 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr9:130913151..130913159,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr9:130913151..130913159, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr21:41755024..41755027,+#_941425c9ead95a02a02e2f83ac361f96 | p2@DSCAM-AS1 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:9012087..9012100,+#_941425c9ead95a02a02e2f83ac361f96 | p1@ENST00000456526 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr7:960534..960548,-#_941425c9ead95a02a02e2f83ac361f96 | p16@ADAP1 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:8910201..8910211,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:8910201..8910211, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr21:41756567..41756583,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr21:41756567..41756583, - |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:19498568..19498573,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498568..19498573, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr15:63753284..63753288,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr15:63753284..63753288, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr6:18496965..18496969,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr6:18496965..18496969, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr11:85539944..85539950,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr11:85539944..85539950, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr19:1753387..1753395,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr19:1753387..1753395, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:19498507..19498511,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498507..19498511, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:19498407..19498415,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498407..19498415, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr21:41755185..41755210,+#_941425c9ead95a02a02e2f83ac361f96 | p1@DSCAM-AS1 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr9:130913135..130913143,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr9:130913135..130913143, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr10:9012087..9012100,+#_941425c9ead95a02a02e2f83ac361f96 | p1@ENST00000456526 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr17:38843592..38843605,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr17:38843592..38843605, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr7:34890932..34890934,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr7:34890932..34890934, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr6:125589278..125589288,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr6:125589278..125589288, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr7:960494..960498,-#_941425c9ead95a02a02e2f83ac361f96 | p19@ADAP1 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr15:63753284..63753288,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr15:63753284..63753288, + |
| 1.1e-24 | FFCP PHASE1:Hg19::chr7:960422..960430,-#_941425c9ead95a02a02e2f83ac361f96 | p20@ADAP1 |
| 1.1e-24 | FFCP PHASE1:Hg19::chr21:41711178..41711186,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr21:41711178..41711186, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:19498541..19498551,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr10:19498541..19498551, + |
| 1.1e-24 | FFCP PHASE2:Hg19::chr21:41756567..41756583,-#_941425c9ead95a02a02e2f83ac361f96 | p@chr21:41756567..41756583, - |
| 1.1e-24 | FFCP PHASE2:Hg19::chr10:9012128..9012139,+#_941425c9ead95a02a02e2f83ac361f96 | p2@ENST00000456526 |
| 1.1e-24 | FFCP PHASE2:Hg19::chr16:75511082..75511090,+#_941425c9ead95a02a02e2f83ac361f96 | p@chr16:75511082..75511090, + |
| 2.18e-24 | FFCP PHASE1:Hg19::chr7:47009249..47009265,+#_5fc5536a0085fd0aba43cce1a459f4f1 | p1@ENST00000445615 |
| 2.18e-24 | FFCP PHASE2:Hg19::chr7:47009249..47009265,+#_5fc5536a0085fd0aba43cce1a459f4f1 | p1@ENST00000445615 |
| 2.5e-23 | FFCP PHASE2:Hg19::chr20:30307655..30307679,-#_5df5761863ca469870a35b80d7c17fc3 | p@chr20:30307655..30307679, - |
| 2.5e-23 | FFCP PHASE1:Hg19::chr20:30307655..30307679,-#_5df5761863ca469870a35b80d7c17fc3 | p@chr20:30307655..30307679, - |
| 3.53e-23 | FFCP PHASE1:Hg19::chr1:204347256..204347303,-#_3108d5f25b6f16c4fb738ddff2cef74e | p1@ENST00000441225 |
| 3.53e-23 | FFCP PHASE2:Hg19::chr1:204347256..204347303,-#_3108d5f25b6f16c4fb738ddff2cef74e | p1@ENST00000441225 |
| 5.85e-23 | FFCP PHASE2:Hg19::chr3:53033328..53033357,-#_7730515163e7acb7cc46928360807b64 | p@chr3:53033328..53033357, - |
| 5.85e-23 | FFCP PHASE1:Hg19::chr3:53033328..53033357,-#_7730515163e7acb7cc46928360807b64 | p@chr3:53033328..53033357, - |
| 6.47e-23 | FFCP PHASE2:Hg19::chr4:19457034..19457063,+#_40f20f162d5d306b13409841eb2cac91 | p1@ENST00000511431 |
| 6.47e-23 | FFCP PHASE1:Hg19::chr4:19457034..19457063,+#_40f20f162d5d306b13409841eb2cac91 | p1@ENST00000511431 |
