DOID:120: Difference between revisions
From FANTOM5_SSTAR
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|id=DOID:120
|name=female reproductve organ cancer
|namespace=
|def="A reproductive organ cancer that is manifested in the female genitals. This includes organs suc...") |
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|id=DOID:120 | |id=DOID:120 | ||
|name=female reproductve organ cancer | |name=female reproductve organ cancer | ||
|namespace= | |namespace=disease_ontology | ||
|def="A reproductive organ cancer that is manifested in the female genitals. This includes organs such as the ovaries, fallopian tubes, uterus, cervix, vagina and vulva." [url:http\://en.wikipedia.org/wiki/Template\:Female_genital_neoplasia, url:http\://www.wrongdiagnosis.com/g/genital_system_cancer/intro.htm] | |def="A reproductive organ cancer that is manifested in the female genitals. This includes organs such as the ovaries, fallopian tubes, uterus, cervix, vagina and vulva." [url:http\://en.wikipedia.org/wiki/Template\:Female_genital_neoplasia, url:http\://www.wrongdiagnosis.com/g/genital_system_cancer/intro.htm] | ||
|xref= | |xref=MSH:D005833;;NCI:C3053;;SNOMEDCT_2010_1_31:126907002;;SNOMEDCT_2010_1_31:188207007;;UMLS_CUI:C0017416;;UMLS_CUI:C0153585;;UMLS_CUI:C0699889 | ||
|is_a=DOID:193 | |is_a=DOID:193 | ||
|synonym="female reproductive cancer" EXACT [];;"malignant Gynecologic tumor" EXACT [NCI2004_11_17:C4913];;"malignant neoplasm of female genital organ" EXACT [] | |synonym="female reproductive cancer" EXACT [];;"malignant Gynecologic tumor" EXACT [NCI2004_11_17:C4913];;"malignant neoplasm of female genital organ" EXACT [] | ||
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|part_of= | |part_of= | ||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |||
|is_obsolete= | |||
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}} | }} | ||
Revision as of 13:59, 11 June 2012
| Name: | female reproductve organ cancer | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Definition: | "A reproductive organ cancer that is manifested in the female genitals. This includes organs such as the ovaries, fallopian tubes, uterus, cervix, vagina and vulva." [url:http\://en.wikipedia.org/wiki/Template\:Female_genital_neoplasia, url:http\://www.wrongdiagnosis.com/g/genital_system_cancer/intro.htm] | ||
| Xrefs: |
| ||
| Synonyms: |
"female reproductive cancer" EXACT [] "malignant Gynecologic tumor" EXACT [NCI2004_11_17:C4913] "malignant neoplasm of female genital organ" EXACT [] | ||
| Alt_id: |
DOID:1244 DOID:1281 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:193(reproductive organ cancer) |
|---|
Children
| is a: | DOID:2021 (placenta cancer),DOID:2394 (ovarian cancer),DOID:3001 (female reproductive endometrioid cancer),DOID:363 (uterine cancer),DOID:4362 (cervical cancer) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10530-107F8
- 10552-107I3 (cervical cancer cell line:D98-AH2)
- 10553-107I4 (cervical cancer cell line:ME-180)
- 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)
- 10598-108E4
- 10623-108H2
- 10636-108I6 (clear cell carcinoma cell line:TEN)
... further results Mouse (Mus musculus)
- 10431-106D8 (epidermoid carcinoma cell line:Ca Ski)
- 10448-106F7 (endometrial stromal sarcoma cell line:OMC-9)
- 10497-107C2 (endometrial carcinoma cell line:OMC-2)
- 10530-107F8
- 10552-107I3 (cervical cancer cell line:D98-AH2)
- 10553-107I4 (cervical cancer cell line:ME-180)
- 10589-108D4 (argyrophil small cell carcinoma cell line:TC-YIK)
- 10598-108E4
- 10623-108H2
- 10636-108I6 (clear cell carcinoma cell line:TEN)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:120 (female reproductve organ cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 3.65e-39 | FFCP PHASE1:Hg19::chr5:136482422..136482426,+#_3f51fe198d61d0536b79e6d58b3418dc | p@chr5:136482422..136482426, + |
| 3.65e-39 | FFCP PHASE2:Hg19::chr5:136482422..136482426,+#_3f51fe198d61d0536b79e6d58b3418dc | p@chr5:136482422..136482426, + |
| 2.16e-37 | FFCP PHASE1:Hg19::chr4:90332316..90332323,+#_dbb80e3c8bd5c7589c86a0374026dcd1 | p@chr4:90332316..90332323, + |
| 2.16e-37 | FFCP PHASE2:Hg19::chr4:90332316..90332323,+#_dbb80e3c8bd5c7589c86a0374026dcd1 | p@chr4:90332316..90332323, + |
| 2.6e-36 | FFCP PHASE1:Hg19::chr5:81654563..81654582,+#_54c1a56bc87633d7352a2a1f224139f8 | p@chr5:81654563..81654582, + |
| 2.6e-36 | FFCP PHASE2:Hg19::chr5:81654563..81654582,+#_54c1a56bc87633d7352a2a1f224139f8 | p@chr5:81654563..81654582, + |
| 9.43e-34 | FFCP PHASE1:Hg19::chr16:88278862..88278869,-#_53ccd36cc00405e1e63a487260060dae | p@chr16:88278862..88278869, - |
| 9.43e-34 | FFCP PHASE2:Hg19::chr16:88278862..88278869,-#_53ccd36cc00405e1e63a487260060dae | p@chr16:88278862..88278869, - |
| 1.17e-32 | FFCP PHASE2:Hg19::chr4:118247051..118247056,+#_940dceebc0f04371c04318561c02da31 | p@chr4:118247051..118247056, + |
| 1.17e-32 | FFCP PHASE1:Hg19::chr4:118247051..118247056,+#_940dceebc0f04371c04318561c02da31 | p@chr4:118247051..118247056, + |
| 2.36e-32 | FFCP PHASE2:Hg19::chr1:9262795..9262800,-#_0e8b6d47f8abc38c6be84173ebef9932 | p3@ENST00000437157 |
| 2.36e-32 | FFCP PHASE1:Hg19::chr1:9262795..9262800,-#_0e8b6d47f8abc38c6be84173ebef9932 | p3@ENST00000437157 |
| 2.85e-32 | FFCP PHASE2:Hg19::chr2:113981834..113981850,-#_7e413846bb78c50e2a0c2ec3d1c25418 | p@chr2:113981834..113981850, - |
| 2.85e-32 | FFCP PHASE1:Hg19::chr2:113981834..113981850,-#_7e413846bb78c50e2a0c2ec3d1c25418 | p@chr2:113981834..113981850, - |
| 7.1e-31 | FFCP PHASE2:Hg19::chr1:98206661..98206672,-#_985deec7b70b2856341d751ed2f4afb6 | p@chr1:98206661..98206672, - |
| 7.1e-31 | FFCP PHASE1:Hg19::chr1:98206661..98206672,-#_985deec7b70b2856341d751ed2f4afb6 | p@chr1:98206661..98206672, - |
| 7.55e-31 | FFCP PHASE1:Hg19::chr6:75178505..75178516,+#_cd721ff87d85f53bfd0ef5a79b5be82c | p@chr6:75178505..75178516, + |
| 7.55e-31 | FFCP PHASE2:Hg19::chr6:75178505..75178516,+#_cd721ff87d85f53bfd0ef5a79b5be82c | p@chr6:75178505..75178516, + |
| 1.02e-30 | FFCP PHASE2:Hg19::chr3:45152138..45152151,-#_7c6cde6aea0dec56386b9f397eaaca6d | p5@CDCP1 |
| 1.02e-30 | FFCP PHASE1:Hg19::chr3:45152138..45152151,-#_7c6cde6aea0dec56386b9f397eaaca6d | p5@CDCP1 |
| 5.44e-30 | FFCP PHASE2:Hg19::chr18:25694851..25694855,-#_54cb62faab00510262fa8e5e0b0722df | p@chr18:25694851..25694855, - |
| 5.44e-30 | FFCP PHASE1:Hg19::chr18:25694851..25694855,-#_54cb62faab00510262fa8e5e0b0722df | p@chr18:25694851..25694855, - |
| 2.95e-29 | FFCP PHASE1:Hg19::chr5:81654586..81654599,+#_3310520a06c591b281eb74a3397abb38 | p@chr5:81654586..81654599, + |
| 2.95e-29 | FFCP PHASE2:Hg19::chr5:81654586..81654599,+#_3310520a06c591b281eb74a3397abb38 | p@chr5:81654586..81654599, + |
| 6.21e-29 | FFCP PHASE1:Hg19::chr14:62024238..62024249,+#_b33afc04f887b6e5e2a98b8169db8f0c | p@chr14:62024238..62024249, + |
| 6.21e-29 | FFCP PHASE2:Hg19::chr14:62024238..62024249,+#_b33afc04f887b6e5e2a98b8169db8f0c | p@chr14:62024238..62024249, + |
| 2.34e-28 | FFCP PHASE1:Hg19::chr9:6257179..6257191,+#_ac6a17fdb2701d90ca583b9b5206a3de | p@chr9:6257179..6257191, + |
| 2.34e-28 | FFCP PHASE2:Hg19::chr9:6257179..6257191,+#_ac6a17fdb2701d90ca583b9b5206a3de | p@chr9:6257179..6257191, + |
| 8.67e-28 | FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_779a6c9d7502870f005b80cc41e696da | p@chr18:53169326..53169330, - |
| 8.67e-28 | FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_779a6c9d7502870f005b80cc41e696da | p@chr18:53169326..53169330, - |
| 9.15e-27 | FFCP PHASE1:Hg19::chr4:167068286..167068320,+#_97390105927c3217380a1d12a6f11650 | p@chr4:167068286..167068320, + |
| 9.15e-27 | FFCP PHASE2:Hg19::chr4:167068286..167068320,+#_97390105927c3217380a1d12a6f11650 | p@chr4:167068286..167068320, + |
| 1.8e-26 | FFCP PHASE2:Hg19::chr1:222079924..222079927,-#_e983871dbdb515a88aff51780d9861f9 | p@chr1:222079924..222079927, - |
| 1.8e-26 | FFCP PHASE1:Hg19::chr1:222079924..222079927,-#_e983871dbdb515a88aff51780d9861f9 | p@chr1:222079924..222079927, - |
| 3.38e-26 | FFCP PHASE1:Hg19::chr4:38143865..38143904,-#_1cd310de5e79e7bd34929a60c17918c5 | p@chr4:38143865..38143904, - |
| 3.38e-26 | FFCP PHASE2:Hg19::chr4:38143865..38143904,-#_1cd310de5e79e7bd34929a60c17918c5 | p@chr4:38143865..38143904, - |
| 3.9e-25 | FFCP PHASE2:Hg19::chr6:14671928..14671958,+#_1fad1663c6541a4d4d9e629288c624cf | p@chr6:14671928..14671958, + |
| 3.9e-25 | FFCP PHASE1:Hg19::chr6:14671928..14671958,+#_1fad1663c6541a4d4d9e629288c624cf | p@chr6:14671928..14671958, + |
| 5.11e-25 | FFCP PHASE1:Hg19::chr2:113982635..113982648,-#_e34c79546954b154d69d45fe29d9c8bf | p8@PAX8 |
| 5.11e-25 | FFCP PHASE2:Hg19::chr2:113982635..113982648,-#_e34c79546954b154d69d45fe29d9c8bf | p8@PAX8 |
| 4.16e-24 | FFCP PHASE1:Hg19::chr6:18497083..18497107,+#_006ded4050deb1879bb6973813a4b73e | p@chr6:18497083..18497107, + |
| 4.16e-24 | FFCP PHASE2:Hg19::chr6:18497083..18497107,+#_006ded4050deb1879bb6973813a4b73e | p@chr6:18497083..18497107, + |
| 6.49e-24 | FFCP PHASE1:Hg19::chr5:64469134..64469150,-#_3f5ef58bb011f799cc659f27ecb25ef1 | p@chr5:64469134..64469150, - |
| 6.49e-24 | FFCP PHASE2:Hg19::chr5:64469134..64469150,-#_3f5ef58bb011f799cc659f27ecb25ef1 | p@chr5:64469134..64469150, - |
| 5.98e-23 | FFCP PHASE1:Hg19::chr6:42724431..42724435,+#_c1c08978fffe7b7a257b28d4f9308307 | p@chr6:42724431..42724435, + |
| 5.98e-23 | FFCP PHASE2:Hg19::chr8:101588316..101588317,-#_c1c08978fffe7b7a257b28d4f9308307 | p1@AK127517 |
| 5.98e-23 | FFCP PHASE2:Hg19::chr6:42724431..42724435,+#_c1c08978fffe7b7a257b28d4f9308307 | p@chr6:42724431..42724435, + |
| 5.98e-23 | FFCP PHASE1:Hg19::chr6:18496965..18496969,+#_c1c08978fffe7b7a257b28d4f9308307 | p@chr6:18496965..18496969, + |
| 5.98e-23 | FFCP PHASE2:Hg19::chr16:75511082..75511090,+#_c1c08978fffe7b7a257b28d4f9308307 | p@chr16:75511082..75511090, + |
| 5.98e-23 | FFCP PHASE1:Hg19::chr7:20257461..20257472,-#_c1c08978fffe7b7a257b28d4f9308307 | p9@MACC1 |
| 5.98e-23 | FFCP PHASE2:Hg19::chr6:18496965..18496969,+#_c1c08978fffe7b7a257b28d4f9308307 | p@chr6:18496965..18496969, + |
| 5.98e-23 | FFCP PHASE1:Hg19::chr8:101588316..101588317,-#_c1c08978fffe7b7a257b28d4f9308307 | p1@AK127517 |
| 5.98e-23 | FFCP PHASE2:Hg19::chr7:20257461..20257472,-#_c1c08978fffe7b7a257b28d4f9308307 | p9@MACC1 |
| 5.98e-23 | FFCP PHASE1:Hg19::chr16:75511082..75511090,+#_c1c08978fffe7b7a257b28d4f9308307 | p@chr16:75511082..75511090, + |
| 1.52e-22 | FFCP PHASE1:Hg19::chr5:73109313..73109326,+#_1ed61ce3ab996e719b066969f00676e3 | p4@RGNEF |
| 1.52e-22 | FFCP PHASE2:Hg19::chr5:73109313..73109326,+#_1ed61ce3ab996e719b066969f00676e3 | p4@RGNEF |
| 5.58e-22 | FFCP PHASE2:Hg19::chr2:162931138..162931149,-#_b8f20b1e79db541619970578b00e7963 | p14@DPP4 |
| 5.58e-22 | FFCP PHASE1:Hg19::chr2:162931138..162931149,-#_b8f20b1e79db541619970578b00e7963 | p14@DPP4 |
| 5.86e-22 | FFCP PHASE1:Hg19::chr12:127762515..127762539,-#_a03f7e6a67774325c7b99f0d84eab1c1 | p@chr12:127762515..127762539, - |
| 5.86e-22 | FFCP PHASE2:Hg19::chr12:127762515..127762539,-#_a03f7e6a67774325c7b99f0d84eab1c1 | p@chr12:127762515..127762539, - |
| 7.34e-22 | FFCP PHASE1:Hg19::chr9:83566735..83566738,+#_c8b1d74a0653d441ba47d8cf0cae86f0 | p@chr9:83566735..83566738, + |
| 7.34e-22 | FFCP PHASE2:Hg19::chr9:83566735..83566738,+#_c8b1d74a0653d441ba47d8cf0cae86f0 | p@chr9:83566735..83566738, + |
| 8.77e-22 | FFCP PHASE2:Hg19::chr20:6034672..6034714,-#_255bafeacc302337f3d90ba6c26d010a | p2@LRRN4 |
| 8.77e-22 | FFCP PHASE1:Hg19::chr20:6034672..6034714,-#_255bafeacc302337f3d90ba6c26d010a | p2@LRRN4 |
| 9.15e-22 | FFCP PHASE1:Hg19::chr13:38083855..38083873,+#_3ad3498b4aa9f29d5194889e794faaf0 | p@chr13:38083855..38083873, + |
| 9.15e-22 | FFCP PHASE2:Hg19::chr13:38083855..38083873,+#_3ad3498b4aa9f29d5194889e794faaf0 | p@chr13:38083855..38083873, + |
| 4.75e-21 | FFCP PHASE2:Hg19::chr2:113982348..113982371,-#_581c1201a8968c0b6b251c0f94887e9c | p@chr2:113982348..113982371, - |
| 4.75e-21 | FFCP PHASE1:Hg19::chr2:113982348..113982371,-#_581c1201a8968c0b6b251c0f94887e9c | p@chr2:113982348..113982371, - |
| 6.42e-21 | FFCP PHASE2:Hg19::chr3:197639921..197639934,-#_14592584b9e0ddb55281e3ad552ef27d | p6@IQCG |
| 6.42e-21 | FFCP PHASE1:Hg19::chr3:197639921..197639934,-#_14592584b9e0ddb55281e3ad552ef27d | p6@IQCG |
| 6.46e-21 | FFCP PHASE1:Hg19::chr10:28367236..28367266,+#_b547d83ec335a9fe0cb78f2c75d44466 | p@chr10:28367236..28367266, + |
| 6.46e-21 | FFCP PHASE2:Hg19::chr10:28367236..28367266,+#_b547d83ec335a9fe0cb78f2c75d44466 | p@chr10:28367236..28367266, + |
| 1.04e-20 | FFCP PHASE1:Hg19::chr22:30640029..30640037,-#_fff9cfb0b1812624affcee6f7c36ce2c | p@chr22:30640029..30640037, - |
| 1.04e-20 | FFCP PHASE2:Hg19::chr22:30640029..30640037,-#_fff9cfb0b1812624affcee6f7c36ce2c | p@chr22:30640029..30640037, - |
| 1.48e-20 | FFCP PHASE1:Hg19::chr7:17409475..17409478,-#_551c04fdfe5784f4b64d3b3bcd151648 | p@chr7:17409475..17409478, - |
| 1.48e-20 | FFCP PHASE2:Hg19::chr7:17409475..17409478,-#_551c04fdfe5784f4b64d3b3bcd151648 | p@chr7:17409475..17409478, - |
| 1.48e-20 | FFCP PHASE2:Hg19::chr22:28901919..28901924,+#_551c04fdfe5784f4b64d3b3bcd151648 | p@chr22:28901919..28901924, + |
| 1.48e-20 | FFCP PHASE1:Hg19::chr22:28901919..28901924,+#_551c04fdfe5784f4b64d3b3bcd151648 | p@chr22:28901919..28901924, + |
| 1.54e-20 | FFCP PHASE1:Hg19::chr17:57841314..57841323,-#_ffd52a28c533cce70db9b427b308c757 | p@chr17:57841314..57841323, - |
| 1.54e-20 | FFCP PHASE2:Hg19::chr17:57841314..57841323,-#_ffd52a28c533cce70db9b427b308c757 | p@chr17:57841314..57841323, - |
| 3.67e-20 | FFCP PHASE1:Hg19::chr9:6257148..6257157,+#_a0e5b333b8f530195da384b15a7d370d | p@chr9:6257148..6257157, + |
| 3.67e-20 | FFCP PHASE2:Hg19::chr9:6257148..6257157,+#_a0e5b333b8f530195da384b15a7d370d | p@chr9:6257148..6257157, + |
| 3.9e-20 | FFCP PHASE1:Hg19::chr16:34980938..34980966,+#_8d91daa6d2bd3f9dc74014daf373363a | p1@FLJ26245 |
| 3.9e-20 | FFCP PHASE2:Hg19::chr16:34980881..34980902,+#_8d91daa6d2bd3f9dc74014daf373363a | p1@ENST00000516136 |
| 3.9e-20 | FFCP PHASE1:Hg19::chr16:34980881..34980902,+#_8d91daa6d2bd3f9dc74014daf373363a | p1@ENST00000516136 |
| 3.9e-20 | FFCP PHASE2:Hg19::chr16:34980938..34980966,+#_8d91daa6d2bd3f9dc74014daf373363a | p1@FLJ26245 |
| 4.2e-20 | FFCP PHASE1:Hg19::chr9:118435168..118435186,+#_d6c528086af65bcaeb1dca79aabd8814 | p@chr9:118435168..118435186, + |
| 4.2e-20 | FFCP PHASE2:Hg19::chr9:118435168..118435186,+#_d6c528086af65bcaeb1dca79aabd8814 | p@chr9:118435168..118435186, + |
| 7.09e-20 | FFCP PHASE2:Hg19::chr2:113990903..113990907,-#_f10639f9d5e21d8d1ccdc58e035f023c | p@chr2:113990903..113990907, - |
| 7.09e-20 | FFCP PHASE1:Hg19::chr2:113990903..113990907,-#_f10639f9d5e21d8d1ccdc58e035f023c | p@chr2:113990903..113990907, - |
| 8.46e-20 | FFCP PHASE1:Hg19::chr10:4284210..4284228,+#_d7b4e0bc463659e25c928d8caac36089 | p@chr10:4284210..4284228, + |
| 8.46e-20 | FFCP PHASE2:Hg19::chr10:4284210..4284228,+#_d7b4e0bc463659e25c928d8caac36089 | p@chr10:4284210..4284228, + |
| 1.04e-19 | FFCP PHASE1:Hg19::chr8:38008450..38008459,-#_18c26edd78b6a6571bb0b3ebe64b0bd0 | p4@STAR |
| 1.04e-19 | FFCP PHASE2:Hg19::chr8:38008450..38008459,-#_18c26edd78b6a6571bb0b3ebe64b0bd0 | p4@STAR |
| 1.89e-19 | FFCP PHASE2:Hg19::chr9:5621474..5621483,-#_3ef6e4e2df63678cac4ab4cbb892a383 | p@chr9:5621474..5621483, - |
| 1.89e-19 | FFCP PHASE1:Hg19::chr9:5621474..5621483,-#_3ef6e4e2df63678cac4ab4cbb892a383 | p@chr9:5621474..5621483, - |
| 2.1e-19 | FFCP PHASE2:Hg19::chr2:114036488..114036504,-#_b937716e2c49722e41d52bff5bdc6483 | p1@PAX8 |
| 2.1e-19 | FFCP PHASE1:Hg19::chr2:114036488..114036504,-#_b937716e2c49722e41d52bff5bdc6483 | p1@PAX8 |
| 4.93e-19 | FFCP PHASE2:Hg19::chr2:1048832..1048860,+#_3ceae0fdac1ac5a234af942d6847fa9a | p@chr2:1048832..1048860, + |
| 4.93e-19 | FFCP PHASE1:Hg19::chr2:1048832..1048860,+#_3ceae0fdac1ac5a234af942d6847fa9a | p@chr2:1048832..1048860, + |
