Personal tools

FFCP PHASE1:Mm9::chr11:49838450..49838523,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0001017!9.36e-10!73;UBERON:0005743!9.36e-10!73;UBERON:0000073!1.51e-09!75;UBERON:0001016!1.51e-09!75;UBERON:0004121!1.74e-08!102;UBERON:0000924!1.74e-08!102;UBERON:0006601!1.74e-08!102;UBERON:0000955!1.19e-07!50;UBERON:0006238!1.19e-07!50;UBERON:0001049!1.63e-07!52;UBERON:0005068!1.63e-07!52;UBERON:0006241!1.63e-07!52;UBERON:0007135!1.63e-07!52;UBERON:0002616!2.96e-07!49;UBERON:0002346!8.72e-07!71;UBERON:0003075!8.72e-07!71;UBERON:0007284!8.72e-07!71
|phase1_expression=3.20297694209588,0,2.72999543633722,3.0246421130683,7.01254021924886,0.839396359559449,1.16806320297763,2.58246646883153,1.267098499365,0.70219357896598,0.68487187290202,1.11681022593471,3.0816131387617,1.83582845079895,1.66554880907831,0.809901069559304,1.39912375625629,4.41647031501533,5.62169177783529,2.54633791078818,3.40173160604279,12.8085327049142,9.66439219814061,0.639969691173627,1.14704640533585,0,1.29228598847722,0.646413698057667,1.90023419456374,0.756090389279792,0.443461021310609,1.90509202037889,1.23012957516914,0,0.866554859253824,1.66234645358492,1.63335485009895,5.02237956884289,7.813353445238,3.14114246384279,11.7646297606203,6.83045484958446,8.25367600152961,2.89562681343828,3.34543873024398,3.67093504323363,2.34717403304412,3.05235218932625,3.29529274101708,3.30530828426282,1.95980990275508,1.43752564364972,4.86569557567435,1.45072428402269,2.68875039313971,3.08711323243136,2.57880095944881,2.06268836910977,3.84401275633236,5.28990979272033,7.60597684207415,1.0165335962074,1.77858959222228,8.09909745553259,4.94433181283487,9.9467216092454,6.5912024314049,5.76327457982332,2.90330914463737,3.78016627328734,3.99617426567626,2.85650984403804,4.8591079009355,3.06226998037385,1.91690942036473,3.67687514644008,6.60695285996332,4.59674417106676,4.45458946443106,2.90149833006426,5.12330804173494,4.68822033501084,4.74611098302348,3.93933827022176,3.97275444219706,5.59794312399969,3.84403538157578,4.28718725398191,4.24066682665831,1.66257432234928,3.18850937571846,6.0229671388697,3.39985666853875,6.47643829965381,9.74664626171504,4.48026887097336,3.23022166303029,0.170430322578058,0.259786004602869,0,3.66192891419369,0,0,0,1.5154372870785,2.02687892380079,1.51657333504435,2.39786147410026,2.33044095282455,5.78924342352817,3.29622120855658,3.34912026143355,2.99800146432876,3.61734337326294,3.41007250693544,4.90099706185734,25.9554716121093,1.87979163995885,3.5384422077995,2.42650274921114,2.42925670306433,1.93950101254089,11.1835056730873,4.39171195517321,6.49284791121711,2.81002760729451,7.90779821739074,5.99902730993408,7.75128385145695,3.59497534571574,4.11750542536764,5.52879149296603,3.82413504423008,5.62574006126727,3.94797284663164,4.38051410282946,4.27725328171328,3.4833951770826,4.0435641349388,2.52530227063769,2.21204753036596,2.98872735763515,2.70093194708024,2.86339153887859,2.38127747029647,1.66547836370305,3.09215691047105,3.3631438196072,1.72454394346274,2.45837904218165,4.75068035242662,3.72632745126877,2.22437799380478,3.48252166522167,4.11564272815887,3.78165106955137,4.21327912387941,5.66165395652373,6.25159698670304,1.44988040774851,2.34526059981096,1.80062061461015,4.02466050494857,2.75469924446365,3.39387648352232,2.32533944750408,2.14618721119695,3.26942958628075,4.27855609775049,4.10418660197738,3.24275238183423,3.21639972335731,2.41505126820156,4.02619256281115,1.68231958851302,2.6755199218614,1.32167513193519,1.05780226665418,1.2797295032114,2.78684006232526,1.54640953586512,1.00841762311671,1.55664630691409,2.47293313946327,0.949058123089023,2.14108641141214,1.00534083520108,2.38747766449381,2.53453313254856,2.69645822596266,2.37751854862164,2.38969527905241,1.89667900953082,1.94222471436539,1.1270773567308,2.8511185898344,2.90928730751439,3.43665517462561,3.22506339333712,3.54264355151045,4.55296310739987,3.82531208157582,5.03969466048153,2.00214126859313,2.55526693647164,1.34917267430912,1.62288097110802,4.10001171579109,2.03700681425136,2.5892652370573,2.2698931748505,3.84385978463314,1.43768206527355,5.95425516269605,4.05648975048929,3.03094653536534,3.94674309748207,6.75420929908714,2.77129785249907,2.27389694124582,1.62964976442026,1.86719594352707,1.64283173801951,4.02015017860358,2.38043640886014,1.75620283072019,2.67979744980525,3.5434350343804,3.18909537314974,2.45794972073607,3.28101465545202,3.61622646453779,13.5712155545345,7.61467957346193,5.4094070032094,3.86311444826625,4.0137647496948,5.39173758324135,1.14754461763673,3.28212205365685,3.78609863299508,1.95219372148319,3.01592756825919,3.58453196928828,3.56477878531831,5.66153061577665,2.83367491172426,2.33804686329049,3.55759000151871,5.78378369559253,6.10342366395555,4.27357448801413,4.56083486190013,5.27904393512113,3.98235415019888,3.64170954232472,2.41858845571801,2.82907619633847,2.95301892880773,2.45948118355142,1.29214146584111,2.18120237686503,2.49548164869305,0.948110273807448,3.16255825724996,1.03135543248187,2.7235168460303,3.06103859853227,3.23396709456886,2.7863814554107,4.96552654198366,4.28085162244969,5.43011767986999,5.17590413494819,1.64270195644597,5.2958017715955,0.882113592219848,1.48397627647332,1.45317984026315,2.29189114726992,2.74556391207214,0.492422699235184,1.1659233465194,4.45020724825223,2.05045056957423,2.68302928352189,3.1483069652851,1.69531611304222,1.6403307326523,1.60144721244566,7.81900777971734,8.6769900440668,8.43019840206985,4.77335309007557,2.05618395827738,3.65975040828328,1.08005340821801,2.09088296014469,3.49380101993884,2.69728692769641,3.05817786183743,4.71160695571253,3.24037433229482,4.97071450469541,1.69107881605257,1.94371509857172,2.15096037594227,2.91676782516071,4.39143399824286,3.54807863530634,2.8165737274981,2.99470085141085,3.77493639932559,4.1069300540421,4.60848010012585,1.58005560314089,4.05450430580328,4.10843828659309,3.24802057444488,3.93858730468459,4.17230845040656,2.52410443991935,2.80610101631697,2.92802704849628,3.42930629947499,1.81487133246313,1.8516997340553,3.2712026157712,3.62318396762864,1.36038230169127,0.443971906748129,0.0897138566094757,0.503653849092235,2.51146472241848,5.06742683718191,6.04400360081975,2.78678892802786,2.50786052017682,7.90652579663893,5.06357760157895,6.87474616127276,4.64003592327956,5.48066015816514,5.2877572817279,2.70009000092722,4.95353323546643,4.07828168085784,1.55328093525546,0.830298780673413,2.39414924040619,2.73173769206615,2.18796045361465,1.04806581313991,1.2869045591501,3.11145418922261,2.47242068686673,1.60459604795908,1.01078884705519,1.01391719956096,1.69763707247469,2.34103768674706,2.43295579138503,2.29741875822453,4.28664322154766,1.62238056322798,2.31491064556446,3.70877310722976,2.50238164228475,2.05721551431249,1.95223386775271,2.38436189947321,1.74415699958794,2.63506265162926,2.19997980518359,1.82927972872773,1.31534855718921,2.03706170768793,3.36685362994643,2.96587545310435,2.65962102414021,4.50154147486658,2.32405261778949,2.3148793317737,4.74640098082097,2.8071793013449,2.57845264857958,2.48674831689496,4.19123696327079,2.31867835620421
|phase1_expression=3.20297694209588,0,2.72999543633722,3.0246421130683,7.01254021924886,0.839396359559449,1.16806320297763,2.58246646883153,1.267098499365,0.70219357896598,0.68487187290202,1.11681022593471,3.0816131387617,1.83582845079895,1.66554880907831,0.809901069559304,1.39912375625629,4.41647031501533,5.62169177783529,2.54633791078818,3.40173160604279,12.8085327049142,9.66439219814061,0.639969691173627,1.14704640533585,0,1.29228598847722,0.646413698057667,1.90023419456374,0.756090389279792,0.443461021310609,1.90509202037889,1.23012957516914,0,0.866554859253824,1.66234645358492,1.63335485009895,5.02237956884289,7.813353445238,3.14114246384279,11.7646297606203,6.83045484958446,8.25367600152961,2.89562681343828,3.34543873024398,3.67093504323363,2.34717403304412,3.05235218932625,3.29529274101708,3.30530828426282,1.95980990275508,1.43752564364972,4.86569557567435,1.45072428402269,2.68875039313971,3.08711323243136,2.57880095944881,2.06268836910977,3.84401275633236,5.28990979272033,7.60597684207415,1.0165335962074,1.77858959222228,8.09909745553259,4.94433181283487,9.9467216092454,6.5912024314049,5.76327457982332,2.90330914463737,3.78016627328734,3.99617426567626,2.85650984403804,4.8591079009355,3.06226998037385,1.91690942036473,3.67687514644008,6.60695285996332,4.59674417106676,4.45458946443106,2.90149833006426,5.12330804173494,4.68822033501084,4.74611098302348,3.93933827022176,3.97275444219706,5.59794312399969,3.84403538157578,4.28718725398191,4.24066682665831,1.66257432234928,3.18850937571846,6.0229671388697,3.39985666853875,6.47643829965381,9.74664626171504,4.48026887097336,3.23022166303029,0.170430322578058,0.259786004602869,0,3.66192891419369,0,0,0,1.5154372870785,2.02687892380079,1.51657333504435,2.39786147410026,2.33044095282455,5.78924342352817,3.29622120855658,3.34912026143355,2.99800146432876,3.61734337326294,3.41007250693544,4.90099706185734,25.9554716121093,1.87979163995885,3.5384422077995,2.42650274921114,2.42925670306433,1.93950101254089,11.1835056730873,4.39171195517321,6.49284791121711,2.81002760729451,7.90779821739074,5.99902730993408,7.75128385145695,3.59497534571574,4.11750542536764,5.52879149296603,3.82413504423008,5.62574006126727,3.94797284663164,4.38051410282946,4.27725328171328,3.4833951770826,4.0435641349388,2.52530227063769,2.21204753036596,2.98872735763515,2.70093194708024,2.86339153887859,2.38127747029647,1.66547836370305,3.09215691047105,3.3631438196072,1.72454394346274,2.45837904218165,4.75068035242662,3.72632745126877,2.22437799380478,3.48252166522167,4.11564272815887,3.78165106955137,4.21327912387941,5.66165395652373,6.25159698670304,1.44988040774851,2.34526059981096,1.80062061461015,4.02466050494857,2.75469924446365,3.39387648352232,2.32533944750408,2.14618721119695,3.26942958628075,4.27855609775049,4.10418660197738,3.24275238183423,3.21639972335731,2.41505126820156,4.02619256281115,1.68231958851302,2.6755199218614,1.32167513193519,1.05780226665418,1.2797295032114,2.78684006232526,1.54640953586512,1.00841762311671,1.55664630691409,2.47293313946327,0.949058123089023,2.14108641141214,1.00534083520108,2.38747766449381,2.53453313254856,2.69645822596266,2.37751854862164,2.38969527905241,1.89667900953082,1.94222471436539,1.1270773567308,2.8511185898344,2.90928730751439,3.43665517462561,3.22506339333712,3.54264355151045,4.55296310739987,3.82531208157582,5.03969466048153,2.00214126859313,2.55526693647164,1.34917267430912,1.62288097110802,4.10001171579109,2.03700681425136,2.5892652370573,2.2698931748505,3.84385978463314,1.43768206527355,5.95425516269605,4.05648975048929,3.03094653536534,3.94674309748207,6.75420929908714,2.77129785249907,2.27389694124582,1.62964976442026,1.86719594352707,1.64283173801951,4.02015017860358,2.38043640886014,1.75620283072019,2.67979744980525,3.5434350343804,3.18909537314974,2.45794972073607,3.28101465545202,3.61622646453779,13.5712155545345,7.61467957346193,5.4094070032094,3.86311444826625,4.0137647496948,5.39173758324135,1.14754461763673,3.28212205365685,3.78609863299508,1.95219372148319,3.01592756825919,3.58453196928828,3.56477878531831,5.66153061577665,2.83367491172426,2.33804686329049,3.55759000151871,5.78378369559253,6.10342366395555,4.27357448801413,4.56083486190013,5.27904393512113,3.98235415019888,3.64170954232472,2.41858845571801,2.82907619633847,2.95301892880773,2.45948118355142,1.29214146584111,2.18120237686503,2.49548164869305,0.948110273807448,3.16255825724996,1.03135543248187,2.7235168460303,3.06103859853227,3.23396709456886,2.7863814554107,4.96552654198366,4.28085162244969,5.43011767986999,5.17590413494819,1.64270195644597,5.2958017715955,0.882113592219848,1.48397627647332,1.45317984026315,2.29189114726992,2.74556391207214,0.492422699235184,1.1659233465194,4.45020724825223,2.05045056957423,2.68302928352189,3.1483069652851,1.69531611304222,1.6403307326523,1.60144721244566,7.81900777971734,8.6769900440668,8.43019840206985,4.77335309007557,2.05618395827738,3.65975040828328,1.08005340821801,2.09088296014469,3.49380101993884,2.69728692769641,3.05817786183743,4.71160695571253,3.24037433229482,4.97071450469541,1.69107881605257,1.94371509857172,2.15096037594227,2.91676782516071,4.39143399824286,3.54807863530634,2.8165737274981,2.99470085141085,3.77493639932559,4.1069300540421,4.60848010012585,1.58005560314089,4.05450430580328,4.10843828659309,3.24802057444488,3.93858730468459,4.17230845040656,2.52410443991935,2.80610101631697,2.92802704849628,3.42930629947499,1.81487133246313,1.8516997340553,3.2712026157712,3.62318396762864,1.36038230169127,0.443971906748129,0.0897138566094757,0.503653849092235,2.51146472241848,5.06742683718191,6.04400360081975,2.78678892802786,2.50786052017682,7.90652579663893,5.06357760157895,6.87474616127276,4.64003592327956,5.48066015816514,5.2877572817279,2.70009000092722,4.95353323546643,4.07828168085784,1.55328093525546,0.830298780673413,2.39414924040619,2.73173769206615,2.18796045361465,1.04806581313991,1.2869045591501,3.11145418922261,2.47242068686673,1.60459604795908,1.01078884705519,1.01391719956096,1.69763707247469,2.34103768674706,2.43295579138503,2.29741875822453,4.28664322154766,1.62238056322798,2.31491064556446,3.70877310722976,2.50238164228475,2.05721551431249,1.95223386775271,2.38436189947321,1.74415699958794,2.63506265162926,2.19997980518359,1.82927972872773,1.31534855718921,2.03706170768793,3.36685362994643,2.96587545310435,2.65962102414021,4.50154147486658,2.32405261778949,2.3148793317737,4.74640098082097,2.8071793013449,2.57845264857958,2.48674831689496,4.19123696327079,2.31867835620421
|short_description=p2@Rnf130
|short_description=p2@Rnf130
}}
}}

Revision as of 15:01, 18 April 2012

Short description:p2@Rnf130
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rnf130_5end
Coexpression cluster:NA
Association with transcript: -309bp_to_NM_021540, uc007irk.1, uc007irl.1, uc007irm.1, uc007irn.1_5end
EntrezGene:Rnf130
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rnf130

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.02
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.62
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.66
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H48.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.67
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.30
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C77.61
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.78
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.92
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D94.24
Mouse Schwann, donor2.CNhs12573.11746-123F91.66
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.23
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.40
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I13.00
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A825.96
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I26.49
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.75
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F15.53
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F25.63
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.28
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.48
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C62.21
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G83.09
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I63.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.66
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C82.75
heart, embryo E16.CNhs11021.457-17C63.39
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E33.27
heart, neonate N03.CNhs11221.1349-25I24.28
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G13.24
heart, neonate N20.CNhs11127.821-26I63.22
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D24.03
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I31.32
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F72.47
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F81.94
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.91
kidney, neonate N00.CNhs11214.646-21G73.44
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I13.54
kidney, neonate N25.CNhs11122.1353-25F34.55
kidney, neonate N30.CNhs11203.1385-42H13.83
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H62.56
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F54.10
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B12.77
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E63.19
lung, neonate N20.CNhs11109.822-18A42.46
lung, neonate N25.CNhs11119.1359-25C73.28
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C24.01
medulla oblongata, neonate N30.CNhs11200.1396-42A35.39
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H74.27
ovary, neonate N00.CNhs11217.1299-22I44.56
oviduct, adult pregnant day01.CNhs10500.988-6G65.28
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.83
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.06
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G35.30
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C31.48
skin, neonate N00.CNhs11124.650-25G41.45
skin, neonate N03.CNhs11215.662-22H32.29
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.43
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B82.70
stomach, neonate N07.CNhs11210.718-18A93.06
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I13.24
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C52.15
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.82
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I44.05
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C53.25
thymus, embryo E17.CNhs10581.478-18C13.94
thymus, embryo E18.CNhs10595.1273-19G44.17
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.81
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E41.81
thymus, neonate N20.CNhs11186.820-7A21.85
thymus, neonate N25.CNhs11125.1362-25G73.27
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:49838450..49838523,%2B&oldid=899832"