Personal tools

FFCP PHASE1:Mm9::chr9:110235906..110235939,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:110235906..110235939,+
|short_description=p1@Scap
|description=CAGE_peak_1_at_Scap_5end
|association_with_transcript=46bp_to_ENSMUST00000098350_5end
|EntrezGene=235623
|EntrezGene=235623
|HGNC=
|HGNC=
|UniProt=Q6GQT6
|UniProt=Q6GQT6
|association_with_transcript=46bp_to_ENSMUST00000098350_5end
|description=CAGE_peak_1_at_Scap_5end
|id=chr9:110235906..110235939,+
|ontology_enrichment_disease=
|phase1_expression=4.48416771893423,3.48975407639361,6.82498859084304,9.98131897312539,10.0179145989269,4.8684988854448,3.97141489012394,2.96983643915625,20.4143647119917,19.6614202110475,5.30775701499065,7.57835510455696,3.93761678841773,3.93391810885488,2.99798785634096,2.02475267389826,2.09868563438444,4.41647031501533,1.91960207048034,1.27316895539409,10.2902381082794,9.4326403640841,10.1867917764185,5.91971964335605,7.34109699414944,4.59385571292016,4.30761996159075,3.23206849028834,8.17100703662408,5.29263272495855,5.32153225572731,12.065582795733,9.84103660135312,31.6963362030877,2.02196133825892,3.32469290716985,2.85837098767317,1.67412652294763,1.5626706890476,0,2.35292595212406,0.683045484958446,2.91306211818692,27.4455063186758,30.4130793658544,36.892897184498,37.5547845287059,27.9072200166972,28.1198313900124,21.1928589990969,15.9584520652913,40.250718022192,2.34895648480831,1.45072428402269,8.06625117941913,8.7468208252222,10.3152038377952,13.9231464914909,6.67644320836673,10.0508286061686,6.33831403506179,43.710944636918,16.8966011261116,7.64914759689189,9.88866362566974,9.9467216092454,41.9440154725767,66.0855485153074,4.14758449233911,4.86021377994086,2.73422449756797,13.7112472513826,12.1477697523387,3.1847607795888,4.50473713785711,1.83843757322004,7.70811166995721,11.6195477657521,11.8277030607307,9.36392642884376,9.14876436024097,3.64639359389732,11.725685958058,9.00420176050688,12.3766580699216,9.1334861496837,10.2507610175354,9.31997229126503,5.14938114665652,8.38844317185319,6.95674772884027,25.8127163094416,62.557362701113,71.2408212961919,77.3233936762726,67.2040330646003,20.2239964989723,8.862376774059,4.93593408745451,8.48014978824817,4.92951969218382,5.13305909657271,0,21.3320010945999,6.71122227134764,5.06719730950197,10.6160133453104,26.2622923353838,4.40194402200192,18.2583831049734,8.84775166507293,18.5723941770406,18.6798552777407,16.5794904607885,26.1046929841265,21.1119873433855,20.517182321953,15.1829324765907,7.07688441559899,4.04417124868523,5.07935492458905,4.84875253135222,16.775258509631,7.90508151931177,11.7290155815535,8.68553987709211,2.75574786363617,1.79970819298022,1.52484272487678,9.73639156131348,15.5550204958333,6.03140890141749,10.7771078519211,8.69432554923124,14.9607392082883,11.8436122039463,5.80484373946803,7.46441823660558,19.7123751578266,55.5566499540291,3.77349284591841,2.75882525320168,5.40186389416048,4.06903008156431,5.98721192531685,7.30248205623644,8.15205003669641,27.1638539275966,4.95806383745537,2.26927296201383,5.10258260075452,2.6303487891309,4.44875598760957,3.48252166522167,5.55611768301447,7.76233640592123,3.51106593656617,1.54408744268829,1.98914449576915,2.07125772535502,0.938104239924385,2.16074473753218,2.3674473558521,2.16440654922144,1.23413690309903,1.16266972375204,1.87791380979733,3.85325629811659,2.13927804887525,2.13417703302824,4.62092214411378,3.36259971078264,2.63460138349261,5.2340503316545,10.0939175310781,5.45394445610208,12.5559137533843,6.34681359992506,1.91959425481711,1.85789337488351,4.12375876230699,4.63872106633688,5.11469500843202,5.70676878337677,4.74529061544512,5.92916237006439,5.27803938480566,4.37704238490532,6.23885078781184,8.98819408654222,4.97117514711797,8.36393347668342,4.36236172192088,4.91268604221834,5.63538678365402,6.31319116320474,4.65485969202302,5.89140887078676,8.66340558602325,14.3181843540214,14.1298855057237,14.0672766870853,33.4991468608478,4.17112764290235,6.6830058338489,9.44420872016386,11.1573066763677,16.1588697034119,12.9859184408524,19.8510334841059,28.5357999124062,24.7105271869273,18.6898668485561,39.8190814005299,39.3167468124346,45.9693557863743,45.9257378616095,58.8581096063308,12.7479701214957,2.65287976478679,2.28150967018836,3.22515662972857,1.64283173801951,4.69017520837084,5.47500374037832,7.41507861859636,4.41378403497335,6.86540537911202,5.74037167166954,10.651115456523,5.35323443784276,7.37710198765709,10.5553898757491,1.08781136763742,50.1599558479417,24.5583704211212,12.36239542906,12.3072270921813,4.26230857979356,6.5642441073137,7.57219726599016,10.9322848403059,6.67812532971677,8.12493913038677,7.5751549188014,6.79383673893198,8.50102473517278,6.42962887404886,10.2774822266096,6.74774764485795,39.3174036026904,9.25941139069727,8.63300884573953,7.09371528781903,14.6019652173959,3.64170954232472,6.34879469625977,9.8074641473067,14.1744908582771,13.5271465095328,10.5955600198971,8.36127577798263,7.48644494607915,18.3301319602773,29.5172104009997,28.8779521094923,18.7241783164583,6.30213829109586,6.20921682157222,6.43011105094777,8.86701168211368,9.45354733290974,8.55654907131029,17.6589670486468,15.0189893160775,18.4293901651524,14.5548742716275,25.7222554588709,11.1410454420175,9.95163261314572,9.66915986425405,10.669158483429,7.57850175237612,15.9465759729038,3.93003025835061,4.54051109519089,3.70389054739423,4.70921142511728,2.7338845544205,3.66045077130436,3.22959016988325,4.75834937900437,4.97519905695926,23.8667654503778,3.63786392618306,6.30290348093231,4.32021363287205,6.27264888043406,9.38959024108564,16.5883146053329,19.919482829806,14.3965768091216,13.6095721956383,21.7468759580424,2.81846469342095,18.2410186173654,13.8985131983962,24.50084973135,23.6362476964248,25.6813310745983,36.8501729347667,21.4837234992518,14.8900269084509,6.52277126230216,8.92893019399383,4.4241556887945,5.0681303822541,5.34096977257102,4.80707045017842,2.50637373934474,3.9736270956253,2.64429988943931,2.65841148914239,2.62512769865184,2.81965184623499,3.7305688500631,3.80085734885034,3.84847366561318,4.20756847853648,14.5107445513735,3.55177525398503,3.3194126945506,4.7007692581942,18.7393906211225,6.75656911624255,4.2124873581471,12.2189976075068,18.5581678493084,3.95326289831947,13.3494318587081,10.3121192419091,9.96748457593388,9.59115527678899,12.8416962556249,4.72515750162264,9.45674526770863,9.9691329976525,7.24864436452548,1.03787347584177,5.98537310101547,2.56100408631201,8.265628380322,2.51535795153579,5.51530525350042,6.00066165064361,5.15087643097235,5.13470735346904,5.81203587056734,4.56262739802432,4.90428487603798,5.80577346313271,6.78666615491614,6.77738533676237,7.1444053692461,4.98302601562879,5.78727661391115,6.59337441285291,5.7407578852415,3.42869252385415,8.16388708332953,6.43777712857767,4.50573891560218,5.27012530325851,5.33072029717562,6.21955107767427,3.41990624869196,5.56796866768033,6.17256498823512,5.33857581558784,4.33419722452479,4.50154147486658,2.94379998253335,6.36591816237767,7.24450676020043,6.55008503647143,11.8179079726564,7.84282161482258,6.83833399270498,4.40548887678801
|phase1_expression=4.48416771893423,3.48975407639361,6.82498859084304,9.98131897312539,10.0179145989269,4.8684988854448,3.97141489012394,2.96983643915625,20.4143647119917,19.6614202110475,5.30775701499065,7.57835510455696,3.93761678841773,3.93391810885488,2.99798785634096,2.02475267389826,2.09868563438444,4.41647031501533,1.91960207048034,1.27316895539409,10.2902381082794,9.4326403640841,10.1867917764185,5.91971964335605,7.34109699414944,4.59385571292016,4.30761996159075,3.23206849028834,8.17100703662408,5.29263272495855,5.32153225572731,12.065582795733,9.84103660135312,31.6963362030877,2.02196133825892,3.32469290716985,2.85837098767317,1.67412652294763,1.5626706890476,0,2.35292595212406,0.683045484958446,2.91306211818692,27.4455063186758,30.4130793658544,36.892897184498,37.5547845287059,27.9072200166972,28.1198313900124,21.1928589990969,15.9584520652913,40.250718022192,2.34895648480831,1.45072428402269,8.06625117941913,8.7468208252222,10.3152038377952,13.9231464914909,6.67644320836673,10.0508286061686,6.33831403506179,43.710944636918,16.8966011261116,7.64914759689189,9.88866362566974,9.9467216092454,41.9440154725767,66.0855485153074,4.14758449233911,4.86021377994086,2.73422449756797,13.7112472513826,12.1477697523387,3.1847607795888,4.50473713785711,1.83843757322004,7.70811166995721,11.6195477657521,11.8277030607307,9.36392642884376,9.14876436024097,3.64639359389732,11.725685958058,9.00420176050688,12.3766580699216,9.1334861496837,10.2507610175354,9.31997229126503,5.14938114665652,8.38844317185319,6.95674772884027,25.8127163094416,62.557362701113,71.2408212961919,77.3233936762726,67.2040330646003,20.2239964989723,8.862376774059,4.93593408745451,8.48014978824817,4.92951969218382,5.13305909657271,0,21.3320010945999,6.71122227134764,5.06719730950197,10.6160133453104,26.2622923353838,4.40194402200192,18.2583831049734,8.84775166507293,18.5723941770406,18.6798552777407,16.5794904607885,26.1046929841265,21.1119873433855,20.517182321953,15.1829324765907,7.07688441559899,4.04417124868523,5.07935492458905,4.84875253135222,16.775258509631,7.90508151931177,11.7290155815535,8.68553987709211,2.75574786363617,1.79970819298022,1.52484272487678,9.73639156131348,15.5550204958333,6.03140890141749,10.7771078519211,8.69432554923124,14.9607392082883,11.8436122039463,5.80484373946803,7.46441823660558,19.7123751578266,55.5566499540291,3.77349284591841,2.75882525320168,5.40186389416048,4.06903008156431,5.98721192531685,7.30248205623644,8.15205003669641,27.1638539275966,4.95806383745537,2.26927296201383,5.10258260075452,2.6303487891309,4.44875598760957,3.48252166522167,5.55611768301447,7.76233640592123,3.51106593656617,1.54408744268829,1.98914449576915,2.07125772535502,0.938104239924385,2.16074473753218,2.3674473558521,2.16440654922144,1.23413690309903,1.16266972375204,1.87791380979733,3.85325629811659,2.13927804887525,2.13417703302824,4.62092214411378,3.36259971078264,2.63460138349261,5.2340503316545,10.0939175310781,5.45394445610208,12.5559137533843,6.34681359992506,1.91959425481711,1.85789337488351,4.12375876230699,4.63872106633688,5.11469500843202,5.70676878337677,4.74529061544512,5.92916237006439,5.27803938480566,4.37704238490532,6.23885078781184,8.98819408654222,4.97117514711797,8.36393347668342,4.36236172192088,4.91268604221834,5.63538678365402,6.31319116320474,4.65485969202302,5.89140887078676,8.66340558602325,14.3181843540214,14.1298855057237,14.0672766870853,33.4991468608478,4.17112764290235,6.6830058338489,9.44420872016386,11.1573066763677,16.1588697034119,12.9859184408524,19.8510334841059,28.5357999124062,24.7105271869273,18.6898668485561,39.8190814005299,39.3167468124346,45.9693557863743,45.9257378616095,58.8581096063308,12.7479701214957,2.65287976478679,2.28150967018836,3.22515662972857,1.64283173801951,4.69017520837084,5.47500374037832,7.41507861859636,4.41378403497335,6.86540537911202,5.74037167166954,10.651115456523,5.35323443784276,7.37710198765709,10.5553898757491,1.08781136763742,50.1599558479417,24.5583704211212,12.36239542906,12.3072270921813,4.26230857979356,6.5642441073137,7.57219726599016,10.9322848403059,6.67812532971677,8.12493913038677,7.5751549188014,6.79383673893198,8.50102473517278,6.42962887404886,10.2774822266096,6.74774764485795,39.3174036026904,9.25941139069727,8.63300884573953,7.09371528781903,14.6019652173959,3.64170954232472,6.34879469625977,9.8074641473067,14.1744908582771,13.5271465095328,10.5955600198971,8.36127577798263,7.48644494607915,18.3301319602773,29.5172104009997,28.8779521094923,18.7241783164583,6.30213829109586,6.20921682157222,6.43011105094777,8.86701168211368,9.45354733290974,8.55654907131029,17.6589670486468,15.0189893160775,18.4293901651524,14.5548742716275,25.7222554588709,11.1410454420175,9.95163261314572,9.66915986425405,10.669158483429,7.57850175237612,15.9465759729038,3.93003025835061,4.54051109519089,3.70389054739423,4.70921142511728,2.7338845544205,3.66045077130436,3.22959016988325,4.75834937900437,4.97519905695926,23.8667654503778,3.63786392618306,6.30290348093231,4.32021363287205,6.27264888043406,9.38959024108564,16.5883146053329,19.919482829806,14.3965768091216,13.6095721956383,21.7468759580424,2.81846469342095,18.2410186173654,13.8985131983962,24.50084973135,23.6362476964248,25.6813310745983,36.8501729347667,21.4837234992518,14.8900269084509,6.52277126230216,8.92893019399383,4.4241556887945,5.0681303822541,5.34096977257102,4.80707045017842,2.50637373934474,3.9736270956253,2.64429988943931,2.65841148914239,2.62512769865184,2.81965184623499,3.7305688500631,3.80085734885034,3.84847366561318,4.20756847853648,14.5107445513735,3.55177525398503,3.3194126945506,4.7007692581942,18.7393906211225,6.75656911624255,4.2124873581471,12.2189976075068,18.5581678493084,3.95326289831947,13.3494318587081,10.3121192419091,9.96748457593388,9.59115527678899,12.8416962556249,4.72515750162264,9.45674526770863,9.9691329976525,7.24864436452548,1.03787347584177,5.98537310101547,2.56100408631201,8.265628380322,2.51535795153579,5.51530525350042,6.00066165064361,5.15087643097235,5.13470735346904,5.81203587056734,4.56262739802432,4.90428487603798,5.80577346313271,6.78666615491614,6.77738533676237,7.1444053692461,4.98302601562879,5.78727661391115,6.59337441285291,5.7407578852415,3.42869252385415,8.16388708332953,6.43777712857767,4.50573891560218,5.27012530325851,5.33072029717562,6.21955107767427,3.41990624869196,5.56796866768033,6.17256498823512,5.33857581558784,4.33419722452479,4.50154147486658,2.94379998253335,6.36591816237767,7.24450676020043,6.55008503647143,11.8179079726564,7.84282161482258,6.83833399270498,4.40548887678801
|short_description=p1@Scap
}}
}}

Revision as of 02:11, 19 April 2012

Short description:p1@Scap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scap_5end
Coexpression cluster:NA
Association with transcript: 46bp_to_ENSMUST00000098350_5end
EntrezGene:Scap
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.98
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.87
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.97
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E720.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F219.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.93
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.32
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B336.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B737.55
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C227.91
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B828.12
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C18.75
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C36.68
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C643.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C841.94
Mouse Microglia, donor2.CNhs12634.11736-123E866.09
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.18
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.50
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F311.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D711.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.15
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E411.73
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F610.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F98.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.96
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C462.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C871.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F477.32
Mouse hepatocyte, donor8.CNhs13091.11824-124F667.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.22
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.71
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.07
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B626.26
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D718.26
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D618.57
adrenal gland, embryo E17.CNhs11043.1263-45I118.68
adrenal gland, embryo E18.CNhs11026.1262-18F516.58
adrenal gland, neonate N00.CNhs11191.1311-23C126.10
adrenal gland, neonate N25.CNhs11223.1377-27I321.11
amnion, adult pregnant day17.5.CNhs10488.583-22A820.52
aorta, adult.CNhs10498.46-23H115.18
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F54.04
bone (os femoris), neonate N16.CNhs11225.1525-43A65.08
bone (os femoris), neonate N20.CNhs11195.1350-25C34.85
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B27.91
cerebellum, neonate N30.CNhs11135.1395-42I211.73
colon, adult.CNhs10468.36-18H78.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A49.74
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D510.78
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F214.96
diencephalon, neonate N30.CNhs11201.1388-42B211.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A27.46
epididymis, adult.CNhs10490.58-23B219.71
eyeball, adult.CNhs10484.31-12G455.56
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C95.40
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E77.30
eyeball, neonate N02.CNhs11205.1551-44G88.15
eyeball, neonate N16.CNhs11188.777-19A227.16
forelimb, embryo E11.CNhs10596.335-25E24.96
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C43.48
forelimb, embryo E18.CNhs11008.1520-43B55.56
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E92.07
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C82.16
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E33.85
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G14.62
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D25.23
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A36.35
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F24.38
intestine, neonate N10.CNhs11098.755-23A56.24
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G18.36
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F84.91
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G75.89
kidney, neonate N10.CNhs11206.758-6D58.66
kidney, neonate N20.CNhs11113.832-19I114.32
kidney, neonate N25.CNhs11122.1353-25F314.13
kidney, neonate N30.CNhs11203.1385-42H114.07
liver, adult pregnant day01.CNhs10466.508-5B233.50
liver, embryo E12.CNhs10601.355-15F84.17
liver, embryo E13.CNhs10524.378-3H66.68
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D711.16
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G419.85
liver, neonate N00.CNhs11117.641-24F428.54
liver, neonate N03.CNhs11123.1345-25G224.71
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H239.82
liver, neonate N10.CNhs11115.751-24B939.32
liver, neonate N20.CNhs11220.823-25A345.97
liver, neonate N25.CNhs11198.1368-26H145.93
liver, neonate N30.CNhs11106.1382-42D158.86
lung, adult.CNhs10474.28-22B112.75
lung, embryo E12.CNhs10522.354-16G22.65
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A64.69
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C67.42
lung, neonate N06.CNhs11212.683-20E54.41
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E65.74
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C75.35
lung, neonate N30.CNhs11133.1394-42H27.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B650.16
mammary gland, adult pregnant day19.CNhs10476.588-5H224.56
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A312.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E17.57
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D96.79
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.43
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I96.75
ovary, adult.CNhs10507.91-2I739.32
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I48.63
oviduct, adult pregnant day01.CNhs10500.988-6G67.09
pancreas, adult.CNhs10486.34-16E414.60
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G314.17
pancreas, embryo E18.CNhs10580.1535-43I713.53
pancreas, neonate N00.CNhs11105.645-26G910.60
pancreas, neonate N01.CNhs11138.1531-43D78.36
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B618.33
pancreas, neonate N25.CNhs11094.1555-45E229.52
pancreas, neonate N30.CNhs11182.1548-44H528.88
pituitary gland, adult.CNhs10493.21-1G818.72
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E917.66
placenta, adult pregnant day10.CNhs10472.539-13I715.02
placenta, adult pregnant day17.CNhs10464.577-18G318.43
prostate, adult.CNhs10470.859-1F814.55
skin, adult.CNhs10492.30-1C325.72
skin, neonate N00.CNhs11124.650-25G411.14
skin, neonate N03.CNhs11215.662-22H39.95
skin, neonate N06.CNhs11097.693-20I59.67
skin, neonate N10.CNhs11108.762-6C410.67
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C915.95
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D14.71
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.98
stomach, adult.CNhs10503.33-1H623.87
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G86.30
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D56.27
stomach, embryo E18.CNhs10999.1286-20C69.39
stomach, neonate N03.CNhs11193.1340-24B816.59
stomach, neonate N07.CNhs11210.718-18A919.92
stomach, neonate N25.CNhs11104.1355-25E414.40
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F518.24
testis, embryo E15.CNhs11034.443-27C513.90
testis, embryo E16.CNhs11033.470-26G524.50
testis, embryo E17.CNhs11029.486-18I523.64
testis, embryo E18.CNhs11027.503-18G525.68
testis, neonate N00.CNhs11189.1300-22B736.85
testis, neonate N07.CNhs11222.726-26I421.48
testis, neonate N10.CNhs11204.763-44D914.89
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E28.93
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C72.66
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.82
thymus, neonate N10.CNhs11194.748-24E43.73
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G73.85
thymus, neonate N30.CNhs11132.1393-42G24.21
tongue, adult.CNhs10499.32-1B414.51
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G54.70
urinary bladder, adult.CNhs10481.879-12E418.74
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D512.22
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D79.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A79.46
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H22.56
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.27
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.33
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.94
whole body, embryo E17.5.CNhs10513.490-9F96.37
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B36.55
whole body, neonate N00.CNhs10525.657-19C211.82
whole body, neonate N01.CNhs10576.659-23C67.84
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:110235906..110235939,%2B&oldid=1001060"