Personal tools

FFCP PHASE1:Mm9::chr9:106331730..106331788,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:106331730..106331788,+
|short_description=p2@Gm10913,p2@Gm13141,p2@Gm13841,p2@Gm6344,p2@Gm6887,p2@Gm8210,p2@Rpl29
|description=CAGE_peak_2_at_Gm10913_5end,CAGE_peak_2_at_Gm13141_5end,CAGE_peak_2_at_Gm13841_5end,CAGE_peak_2_at_Gm6344_5end,CAGE_peak_2_at_Gm6887_5end,CAGE_peak_2_at_Gm8210_5end,CAGE_peak_2_at_Rpl29_5end
|association_with_transcript=0bp_to_ENSMUST00000150576_5end
|EntrezGene=100503125,19944,545718,622707,628503,665032,666642
|EntrezGene=100503125,19944,545718,622707,628503,665032,666642
|HGNC=
|HGNC=
|UniProt=P47915
|UniProt=P47915
|association_with_transcript=0bp_to_ENSMUST00000150576_5end
|description=CAGE_peak_2_at_Gm10913_5end,CAGE_peak_2_at_Gm13141_5end,CAGE_peak_2_at_Gm13841_5end,CAGE_peak_2_at_Gm6344_5end,CAGE_peak_2_at_Gm6887_5end,CAGE_peak_2_at_Gm8210_5end,CAGE_peak_2_at_Rpl29_5end
|id=chr9:106331730..106331788,+
|ontology_enrichment_disease=
|phase1_expression=2.88267924788629,1.39590163055744,1.36499771816861,2.11724947914781,0.500895729946347,1.6787927191189,5.37309073369709,10.0716192284429,7.74337971834167,6.78787126333781,13.6974374580404,19.3048624768714,6.67682846731702,10.4030278878607,16.6554880907831,16.6029719259657,11.8925519281785,13.249410945046,11.7918412900935,9.76096199135469,3.82694805679814,8.24114894967348,9.92559198727954,6.07971206614945,5.96464130774642,1.72269589234506,3.01533397311352,5.38678081714723,3.99049180858385,2.52030129759931,6.87364583031445,43.1820857952549,62.1215435460416,31.6963362030877,8.37669697278696,11.3039558843775,5.51257261908397,8.37063261473815,8.5946887897618,9.42342739152837,8.2352408324342,9.56263678941824,4.85510353031154,2.14024590558481,3.14268486780495,3.12029478674859,8.60630478782843,17.2239873540553,2.85592037554813,5.44403717407994,9.65906309215001,18.6878333674463,9.2280433331755,8.70434570413613,14.7881271622684,15.1783067261209,10.3152038377952,2.57836046138721,6.06949382578793,3.70293685490423,6.97214543856797,22.0248945844936,25.789549087223,3.5995988691256,5.93319817540185,4.2628806896766,8.68840320503374,6.53171119046643,10.2652716185393,13.7706057098324,10.3059231062177,7.7125765789027,7.06779331045163,8.45186514583183,12.0765293482978,10.1114066527102,3.30347642998166,1.27687338085188,1.68967186581868,5.93488294785872,4.48289453651807,3.64639359389732,2.51264699101243,1.12552522006336,0.61119299110724,5.00868595305235,4.12877874317399,3.54158947068071,29.4574892066086,12.5448789777264,1.73918693221007,3.44169550792555,7.47968467078526,10.7940638327563,5.19821133958135,2.24013443548668,2.10666630197628,8.35108580632483,11.4305842025262,12.0135455333516,1.83096445709685,7.69958864485907,5.09610479413291,0,26.8448890853906,30.4031838570118,21.7375511356357,5.1382745873577,11.9111426477699,1.03909497345377,9.1947223186052,6.08930956624282,4.61230994512117,2.71300752994721,2.58695155698551,1.38233250462643,2.71914464507811,1.87979163995885,5.30766331169925,3.07357014900077,3.97514733228708,6.30337829075789,3.72783522436244,0.585561594023094,1.04723353406728,3.0654846625031,8.98613433794402,14.3976655438418,9.91147771169905,0.449371918214468,1.37250180845588,3.64397621127307,1.91206752211504,1.27857728665165,0.41557608911912,0.811206315338788,3.36069900706044,3.6078021476927,1.0108910337347,1.26265113531884,8.58794923553845,8.04657365517155,8.64298223065676,4.52114453507145,4.150226448231,4.99643509110914,6.27801554550183,1.29351685369508,15.3053274982318,9.26619792822314,5.27853372491847,6.35667624039967,4.44875598760957,2.78601733217733,2.88094990971121,7.56330213910274,11.937624184325,13.1247432628505,9.94572247884574,8.07790512888457,7.03578179943289,4.32148947506436,6.39210786080068,2.95146347621106,3.5481435964097,2.32533944750408,2.68273401399619,2.10177616260905,2.13927804887525,1.47750717671186,1.29710095273369,1.46199987425332,2.41505126820156,0.805238512562231,0.630869845692382,5.04232600658494,0.991256348951394,5.28901133327089,11.9441420299731,6.27039014023184,7.34544529535932,6.05050573870028,4.00280478920767,2.28270751335071,2.84717436926707,2.9645811850322,1.75934646160189,0.596869416123452,1.75467678407208,3.59527763461689,3.02593269824572,3.38540164532424,16.5011073829181,9.71112357182695,6.76246414038483,5.29493452397817,3.87904974335251,3.29638353484497,1.51767689098217,1.03327103585722,1.56998727841375,1.48076596706161,2.66807364378434,18.3529616287703,22.4077254429051,14.8408994174003,10.1430060694251,8.68237775108701,4.07401362850272,4.89083433666378,2.7562988551756,7.13859674289012,4.31304619582064,1.11642284300551,2.18426371180192,2.27320990152401,5.38192240565737,3.37710464954357,1.29327233116623,11.3694847062291,9.12603868075345,7.46878377410828,7.51008794523207,5.52770649557992,3.57065461329021,1.95133647857799,2.04925687338048,3.98636441367795,1.91345722388985,2.29408640602033,1.72684981865896,1.01254341007058,0,8.15858525728064,6.39293554924747,2.20749397043786,0.80275294993896,1.05490517932983,11.3115112309906,2.01976741763498,6.94118082715765,13.2749173060857,6.24727853425117,8.36390792833932,7.5751549188014,5.09537755419898,7.69140333182299,7.59865230569411,7.11518000303742,1.28528526568723,2.55492153374884,3.5613120733451,3.25773918707152,2.3095817216155,2.65490276679926,10.9251286269742,8.46505959501303,8.67583366877131,4.72483028609236,3.99665692327106,1.55056975900933,2.18120237686503,2.49548164869305,2.84433082142234,1.05418608574999,1.03135543248187,0.340439605753788,8.10274923140896,10.6074120701859,4.07240366560025,2.6601035046341,3.0322698992352,3.29098041204242,3.04464949114599,9.62154003061212,0.63549621259146,1.54369878638473,2.80306630000516,3.22928853391811,5.48847616846218,3.81991500810037,2.79039529566604,4.37221254944776,1.11255181206306,8.03093139749908,7.63631411463923,13.519200497989,6.96963290917357,8.74843057414561,3.88922894451088,5.09935289981566,4.75834937900437,4.42239916174156,5.72802370809068,8.85740782027179,9.35269548783504,4.21220829205025,3.3454127362315,3.49380101993884,3.50647300600534,2.31429676030941,2.09404753587224,2.07383957266869,1.86401793926078,7.32800820289447,10.9147078612105,8.60384150376908,6.41688921535357,5.94135187997563,3.04121025883401,3.0512882047896,5.7289929331338,6.8158573876712,2.89900944991207,1.15212002503146,10.4283669807299,8.31173382689673,7.70332178736204,12.3424781828905,14.143108957731,13.1129694155635,9.13485416351763,10.6336459565696,10.8034101444518,9.44964402521998,12.4016207718314,11.3051141658113,12.0264802050412,8.06450625052826,1.58711268530648,26.1943424981396,23.5050304316826,31.8980771091749,0.965947970160952,3.94133198447482,2.38097111547445,6.85978813053011,0.501572104035363,1.6942555278512,4.14292712856459,2.86447756719698,6.35856774671644,0,0.755393897389701,3.37511250115903,0.900642406448441,1.35942722695261,2.5888015587591,14.9453780521214,6.78342284781753,7.5122786531819,8.75184181445858,10.6902712940271,4.41224420280034,2.889207461421,4.73880631649457,2.56735367673452,3.03236654116557,3.8021894983536,5.47016390019621,4.12022632867483,3.58540853467268,3.9056118889817,5.23923060411381,3.94006708212509,2.12200142510076,5.35711671044299,2.20798380201596,2.40008476669791,3.19456451086807,3.33810665926249,4.79643174886684,4.70546902076653,3.89227196301712,3.29270351170991,4.99832451731901,3.66671107383827,2.80571135828869,3.08451047122853,3.84167481264697,3.6830793885272,5.11291575913688,4.62975866354739,3.74715866906919,2.57324769289949,2.36358159453128,3.06061331310149,3.97064554415128,2.78241402744506
|phase1_expression=2.88267924788629,1.39590163055744,1.36499771816861,2.11724947914781,0.500895729946347,1.6787927191189,5.37309073369709,10.0716192284429,7.74337971834167,6.78787126333781,13.6974374580404,19.3048624768714,6.67682846731702,10.4030278878607,16.6554880907831,16.6029719259657,11.8925519281785,13.249410945046,11.7918412900935,9.76096199135469,3.82694805679814,8.24114894967348,9.92559198727954,6.07971206614945,5.96464130774642,1.72269589234506,3.01533397311352,5.38678081714723,3.99049180858385,2.52030129759931,6.87364583031445,43.1820857952549,62.1215435460416,31.6963362030877,8.37669697278696,11.3039558843775,5.51257261908397,8.37063261473815,8.5946887897618,9.42342739152837,8.2352408324342,9.56263678941824,4.85510353031154,2.14024590558481,3.14268486780495,3.12029478674859,8.60630478782843,17.2239873540553,2.85592037554813,5.44403717407994,9.65906309215001,18.6878333674463,9.2280433331755,8.70434570413613,14.7881271622684,15.1783067261209,10.3152038377952,2.57836046138721,6.06949382578793,3.70293685490423,6.97214543856797,22.0248945844936,25.789549087223,3.5995988691256,5.93319817540185,4.2628806896766,8.68840320503374,6.53171119046643,10.2652716185393,13.7706057098324,10.3059231062177,7.7125765789027,7.06779331045163,8.45186514583183,12.0765293482978,10.1114066527102,3.30347642998166,1.27687338085188,1.68967186581868,5.93488294785872,4.48289453651807,3.64639359389732,2.51264699101243,1.12552522006336,0.61119299110724,5.00868595305235,4.12877874317399,3.54158947068071,29.4574892066086,12.5448789777264,1.73918693221007,3.44169550792555,7.47968467078526,10.7940638327563,5.19821133958135,2.24013443548668,2.10666630197628,8.35108580632483,11.4305842025262,12.0135455333516,1.83096445709685,7.69958864485907,5.09610479413291,0,26.8448890853906,30.4031838570118,21.7375511356357,5.1382745873577,11.9111426477699,1.03909497345377,9.1947223186052,6.08930956624282,4.61230994512117,2.71300752994721,2.58695155698551,1.38233250462643,2.71914464507811,1.87979163995885,5.30766331169925,3.07357014900077,3.97514733228708,6.30337829075789,3.72783522436244,0.585561594023094,1.04723353406728,3.0654846625031,8.98613433794402,14.3976655438418,9.91147771169905,0.449371918214468,1.37250180845588,3.64397621127307,1.91206752211504,1.27857728665165,0.41557608911912,0.811206315338788,3.36069900706044,3.6078021476927,1.0108910337347,1.26265113531884,8.58794923553845,8.04657365517155,8.64298223065676,4.52114453507145,4.150226448231,4.99643509110914,6.27801554550183,1.29351685369508,15.3053274982318,9.26619792822314,5.27853372491847,6.35667624039967,4.44875598760957,2.78601733217733,2.88094990971121,7.56330213910274,11.937624184325,13.1247432628505,9.94572247884574,8.07790512888457,7.03578179943289,4.32148947506436,6.39210786080068,2.95146347621106,3.5481435964097,2.32533944750408,2.68273401399619,2.10177616260905,2.13927804887525,1.47750717671186,1.29710095273369,1.46199987425332,2.41505126820156,0.805238512562231,0.630869845692382,5.04232600658494,0.991256348951394,5.28901133327089,11.9441420299731,6.27039014023184,7.34544529535932,6.05050573870028,4.00280478920767,2.28270751335071,2.84717436926707,2.9645811850322,1.75934646160189,0.596869416123452,1.75467678407208,3.59527763461689,3.02593269824572,3.38540164532424,16.5011073829181,9.71112357182695,6.76246414038483,5.29493452397817,3.87904974335251,3.29638353484497,1.51767689098217,1.03327103585722,1.56998727841375,1.48076596706161,2.66807364378434,18.3529616287703,22.4077254429051,14.8408994174003,10.1430060694251,8.68237775108701,4.07401362850272,4.89083433666378,2.7562988551756,7.13859674289012,4.31304619582064,1.11642284300551,2.18426371180192,2.27320990152401,5.38192240565737,3.37710464954357,1.29327233116623,11.3694847062291,9.12603868075345,7.46878377410828,7.51008794523207,5.52770649557992,3.57065461329021,1.95133647857799,2.04925687338048,3.98636441367795,1.91345722388985,2.29408640602033,1.72684981865896,1.01254341007058,0,8.15858525728064,6.39293554924747,2.20749397043786,0.80275294993896,1.05490517932983,11.3115112309906,2.01976741763498,6.94118082715765,13.2749173060857,6.24727853425117,8.36390792833932,7.5751549188014,5.09537755419898,7.69140333182299,7.59865230569411,7.11518000303742,1.28528526568723,2.55492153374884,3.5613120733451,3.25773918707152,2.3095817216155,2.65490276679926,10.9251286269742,8.46505959501303,8.67583366877131,4.72483028609236,3.99665692327106,1.55056975900933,2.18120237686503,2.49548164869305,2.84433082142234,1.05418608574999,1.03135543248187,0.340439605753788,8.10274923140896,10.6074120701859,4.07240366560025,2.6601035046341,3.0322698992352,3.29098041204242,3.04464949114599,9.62154003061212,0.63549621259146,1.54369878638473,2.80306630000516,3.22928853391811,5.48847616846218,3.81991500810037,2.79039529566604,4.37221254944776,1.11255181206306,8.03093139749908,7.63631411463923,13.519200497989,6.96963290917357,8.74843057414561,3.88922894451088,5.09935289981566,4.75834937900437,4.42239916174156,5.72802370809068,8.85740782027179,9.35269548783504,4.21220829205025,3.3454127362315,3.49380101993884,3.50647300600534,2.31429676030941,2.09404753587224,2.07383957266869,1.86401793926078,7.32800820289447,10.9147078612105,8.60384150376908,6.41688921535357,5.94135187997563,3.04121025883401,3.0512882047896,5.7289929331338,6.8158573876712,2.89900944991207,1.15212002503146,10.4283669807299,8.31173382689673,7.70332178736204,12.3424781828905,14.143108957731,13.1129694155635,9.13485416351763,10.6336459565696,10.8034101444518,9.44964402521998,12.4016207718314,11.3051141658113,12.0264802050412,8.06450625052826,1.58711268530648,26.1943424981396,23.5050304316826,31.8980771091749,0.965947970160952,3.94133198447482,2.38097111547445,6.85978813053011,0.501572104035363,1.6942555278512,4.14292712856459,2.86447756719698,6.35856774671644,0,0.755393897389701,3.37511250115903,0.900642406448441,1.35942722695261,2.5888015587591,14.9453780521214,6.78342284781753,7.5122786531819,8.75184181445858,10.6902712940271,4.41224420280034,2.889207461421,4.73880631649457,2.56735367673452,3.03236654116557,3.8021894983536,5.47016390019621,4.12022632867483,3.58540853467268,3.9056118889817,5.23923060411381,3.94006708212509,2.12200142510076,5.35711671044299,2.20798380201596,2.40008476669791,3.19456451086807,3.33810665926249,4.79643174886684,4.70546902076653,3.89227196301712,3.29270351170991,4.99832451731901,3.66671107383827,2.80571135828869,3.08451047122853,3.84167481264697,3.6830793885272,5.11291575913688,4.62975866354739,3.74715866906919,2.57324769289949,2.36358159453128,3.06061331310149,3.97064554415128,2.78241402744506
|short_description=p2@Gm10913,p2@Gm13141,p2@Gm13841,p2@Gm6344,p2@Gm6887,p2@Gm8210,p2@Rpl29
}}
}}

Revision as of 02:00, 19 April 2012

Short description:p2@Gm10913, p2@Gm13141, p2@Gm13841, p2@Gm6344, p2@Gm6887, p2@Gm8210, p2@Rpl29
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gm10913_5end, CAGE_peak_2_at_Gm13141_5end, CAGE_peak_2_at_Gm13841_5end, CAGE_peak_2_at_Gm6344_5end, CAGE_peak_2_at_Gm6887_5end, CAGE_peak_2_at_Gm8210_5end, CAGE_peak_2_at_Rpl29_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000150576_5end
EntrezGene:100503125,19944,545718,622707,628503,665032,666642
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gm10913p2@Gm13141p2@Gm13841p2@Gm6344p2@Gm6887p2@Gm8210p2@Rpl29

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.37
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.74
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F26.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E613.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A316.60
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.79
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A69.76
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.24
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.93
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C12.52
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G662.12
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.38
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H18.59
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H39.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H29.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.14
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.18
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E110.32
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C36.07
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C88.69
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.77
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.07
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.93
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D929.46
Mouse Schwann, donor2.CNhs12573.11746-123F912.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C47.48
Mouse hepatocyte, donor3.CNhs12615.11637-122C810.79
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G126.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G230.40
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G321.74
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.14
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C59.19
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D114.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.91
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.42
diencephalon, neonate N30.CNhs11201.1388-42B20.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C68.59
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C64.15
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H29.27
forelimb, embryo E13.CNhs10589.384-1E25.28
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.12
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D59.95
heart, embryo E11.CNhs10586.331-24E98.08
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D46.39
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G15.04
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A35.29
intestine, embryo E12.CNhs11019.1251-16I511.94
intestine, embryo E13.CNhs11010.381-16D56.27
intestine, embryo E15.CNhs10602.976-16D87.35
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.00
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.75
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E33.03
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I916.50
kidney, embryo E15.CNhs10997.434-16F89.71
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G73.30
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.57
kidney, neonate N30.CNhs11203.1385-42H11.48
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F818.35
liver, embryo E13.CNhs10524.378-3H622.41
liver, embryo E14.CNhs10594.409-16E114.84
liver, embryo E15.CNhs10520.433-16D710.14
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H15.38
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G211.37
lung, embryo E14.CNhs10604.404-26F89.13
lung, embryo E15.CNhs11020.432-17C57.47
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A65.53
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A33.99
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H22.21
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.94
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.27
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.60
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G62.31
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F410.93
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E58.68
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E68.10
pituitary gland, embryo E13.CNhs11009.370-44C710.61
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B92.66
pituitary gland, embryo E16.CNhs11036.449-43F63.03
pituitary gland, embryo E17.CNhs11039.1265-44F53.29
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H35.49
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G28.03
spleen, embryo E16.CNhs11035.461-43C17.64
spleen, embryo E18.CNhs11011.1271-21F213.52
spleen, neonate N10.CNhs11116.752-24D16.97
spleen, neonate N20.CNhs11112.824-19H18.75
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.42
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E38.86
stomach, embryo E15.CNhs10603.1252-16G89.35
stomach, embryo E16.CNhs11022.459-17D44.21
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B83.51
stomach, neonate N07.CNhs11210.718-18A92.31
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F510.91
testis, embryo E15.CNhs11034.443-27C58.60
testis, embryo E16.CNhs11033.470-26G56.42
testis, embryo E17.CNhs11029.486-18I55.94
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B510.43
thymus, embryo E14.CNhs11041.402-44I48.31
thymus, embryo E15.CNhs11005.430-45I27.70
thymus, embryo E16.CNhs11002.456-26C512.34
thymus, embryo E17.CNhs10581.478-18C114.14
thymus, embryo E18.CNhs10595.1273-19G413.11
thymus, neonate N02.CNhs11181.1541-43F89.13
thymus, neonate N03.CNhs11137.2104-43C710.63
thymus, neonate N06.CNhs11197.681-26C410.80
thymus, neonate N07.CNhs11211.713-19D39.45
thymus, neonate N10.CNhs11194.748-24E412.40
thymus, neonate N20.CNhs11186.820-7A211.31
thymus, neonate N25.CNhs11125.1362-25G712.03
thymus, neonate N30.CNhs11132.1393-42G28.06
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H326.19
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G531.90
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D56.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.36
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I814.95
whole body, embryo E12.CNhs10587.857-27C96.78
whole body, embryo E13.CNhs10512.372-23H27.51
whole body, embryo E14.5.CNhs10578.420-27D28.75
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F24.41
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.89
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.11
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B42.78





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:106331730..106331788,%2B&oldid=999388"