Personal tools

FFCP PHASE1:Mm9::chr8:96622242..96622288,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr8:96622242..96622288,-
|short_description=p1@Bbs2
|description=CAGE_peak_1_at_Bbs2_5end
|association_with_transcript=422bp_to_ENSMUST00000034206,NM_026116,uc009mvs.1_5end
|EntrezGene=67378
|EntrezGene=67378
|HGNC=
|HGNC=
|UniProt=Q9CWF6
|UniProt=Q9CWF6
|association_with_transcript=422bp_to_ENSMUST00000034206,NM_026116,uc009mvs.1_5end
|description=CAGE_peak_1_at_Bbs2_5end
|id=chr8:96622242..96622288,-
|ontology_enrichment_disease=
|phase1_expression=19.2178616525753,1.04692622291808,0.909998478779072,0,0.500895729946347,1.51091344720701,1.16806320297763,10.0716192284429,2.25261955442667,3.97909694747389,2.05461561870606,0.957265907944037,7.36163138704185,8.13009742496676,1.33243904726265,3.03712901084739,2.09868563438444,8.67520954735154,10.1464680868247,8.91218268775863,15.90309525825,3.67376519443276,7.31359409589019,1.75991665072747,3.21172993494038,0,0,1.29282739611533,0.760093677825496,1.26015064879965,1.55211357458713,0.635030673459631,0.61506478758457,15.8481681015439,3.75507105676657,2.1610503896604,1.42918549383658,2.09265815368454,2.3440060335714,0.523523743973798,5.88231488031014,0.683045484958446,0.971020706062307,8.68688044031483,4.66333883609767,5.68994931701213,5.47673941043627,6.32272953503295,6.15121311656521,7.19390626574849,10.2190087786515,2.87505128729943,9.2280433331755,7.25362142011344,8.73843877770406,3.60163210450326,7.44986943840768,2.57836046138721,13.3528864167335,12.1667925232568,12.0427966666174,1.0165335962074,2.66788438833342,1.7997994345628,2.96659908770092,1.4209602298922,1.79760066311043,1.53687322128622,4.97710139080693,5.13022565660425,3.78584930432488,6.85562362569129,5.30084498283872,4.65465037016825,4.69642807989358,8.27296907949019,24.2254938198655,15.1947932321373,17.664751324468,10.2871304429551,8.87430142943374,6.25096044668112,15.0758819460746,19.1339287410771,17.72459674211,10.3120004915784,9.25415925194169,9.31997229126503,1.8931548333296,3.02286240427142,9.85539261585705,0.860423876981386,0.679971333707751,2.69851595818909,1.29955283489534,2.68816132258401,6.60088774619234,9.88495870952735,3.37721805983729,4.59341446863442,17.0420537929783,6.41632387071589,0,0,1.29894624606728,1.26679932737549,1.51657333504435,3.53970027129086,14.2415836005944,12.3206975423805,6.93941307064543,8.8294988710521,5.99600292865752,8.13902258984162,14.4634109776917,9.80199412371469,5.93267922562497,11.2787498397531,1.76922110389975,5.01477234836968,2.65009822152472,1.45462575940567,3.72783522436244,18.1524094147159,12.3573557019938,4.34276993854605,3.23500836165985,1.19980546198682,3.55796635804581,31.4560342750128,28.3650373747548,9.1727677042391,27.638066910572,19.6900902144355,22.8566849015516,25.9586020908412,8.45266719957625,8.33526703087623,28.8103944614389,23.7799297151716,10.0192741081282,7.81667155073808,6.84236093260327,11.7549757911858,14.5598108183842,17.4234659587396,12.2749259173245,63.3823258310588,4.74249584452253,8.50977360755187,6.51019159406611,6.35667624039967,5.56094498451196,7.66154766348766,6.37924622864625,5.37392520409932,2.80885274925294,2.83082697826187,3.40996199274711,4.55676699578104,6.80125573945179,4.68161359798639,3.78791576936336,5.3126342571799,4.78228049950873,9.30135779001631,4.82892122519315,10.6256461554124,4.77223564749093,8.04420573987567,8.18794976413143,7.45619935869195,6.14740322814942,11.4075455946316,25.4450837762594,8.54108282748061,1.65209391491899,0.264450566663544,8.95810652247983,6.96710015581316,5.15469845288373,4.23535401709019,3.11329261382818,3.80451252225118,0.474529061544512,3.29397909448022,5.27803938480566,6.56556357735798,3.50935356814416,1.79763881730844,2.80979464837102,5.37681437786791,7.58671603812327,7.99739588268102,13.5249282807697,8.5533557695032,8.53390943537553,9.46833568519301,11.9517055164846,16.8275568696746,15.6998727841375,16.7820142933649,0.592905254174298,0.667380422864376,1.17935397067922,1.34917267430912,1.62288097110802,0.72353147925725,1.52775511068852,0.575392274901621,2.7562988551756,0.274561413188081,0,5.20997326735905,3.12037673114561,1.26289438973556,1.25578189465339,3.37710464954357,13.8564892624954,3.60033682363921,5.0519142697028,5.60158783058121,6.80601720036656,7.03526281255626,9.28370199455454,7.80534591431195,8.35466263762812,7.30833475840957,7.65382889555938,10.9788420859544,5.87128938344045,10.9933284521949,6.03165135757089,3.26343410291226,3.44234991113325,3.58717770196152,25.5275438080589,18.9882932279369,6.39346286969034,3.28212205365685,4.10160685241134,1.17131623288992,8.40151251157916,4.30143836314594,4.23317480756549,4.81230102341015,2.42886421004937,7.89090816360542,5.92931666919785,32.7747742750243,14.7617688616599,10.6839362200353,12.2165219515182,14.5173708215831,9.2921596837974,8.98288353773431,8.46505959501303,4.71512699389745,5.90603785761546,7.68587869859819,7.49442050187841,10.1789444253702,7.84294232446387,4.10847785316561,4.21674434299995,3.09406629744561,48.3424240170379,9.72329907769075,12.1597162755789,14.5749183821483,19.8621061679346,18.5503570306153,23.3659609255012,29.2286351150015,4.22409074514679,7.20229040936989,9.92377791247329,4.78170133530292,9.20347232166662,4.88534691918062,6.32673423216623,4.76008609260678,4.37221254944776,20.7676338251771,2.22132145037209,5.98521917093345,3.1483069652851,1.88368457004691,3.69074414846768,2.0590035588587,7.81900777971734,5.318155188299,4.14599921413271,6.68269432610579,5.3777118908793,6.91286188231286,5.29226170026826,4.59994251231831,6.33251434863915,5.52943820177765,6.86023682520288,4.18809507174447,7.64728342421578,9.32008969630389,37.7674268918407,3.88743019714345,5.46013018508422,5.25018208528929,3.35815541042101,7.60302564708502,10.4447942394721,5.7289929331338,11.953965264531,53.3900907025473,45.5087409887427,4.74016680942267,6.08175645870493,5.34096977257102,5.45667456506739,3.58053391334963,3.77494574084403,4.20684073319891,3.54454865218985,4.34155734777035,3.27689268616499,3.32726410951574,3.80085734885034,2.30908419936791,3.27255326108393,10.4295976462997,1.33191572024439,1.61484941897056,2.3503846290971,11.3981860478992,6.56888664079137,10.6227942075014,7.28852488868824,14.0440189129902,24.2843292325339,16.5717085142584,14.8952833494243,20.7942350635862,28.773465830367,19.6402413321322,20.2506750069542,21.1650965515384,23.1102628581944,26.9235362110946,5.70830411712972,5.1873233542134,8.87814749921498,5.59145449257076,7.1268475293514,4.04455718590031,5.778414922842,5.97501665992793,8.3438994493872,5.55933865880354,6.33698249725599,5.47016390019621,5.61849044819294,4.9939618875798,4.70970845436029,5.23923060411381,2.89710814862139,3.47236596834669,4.94503080963968,5.4463600449727,5.14303878578123,6.38912902173615,4.76872379894642,4.65108533223451,6.68176600948847,4.90764725771724,4.024415403201,6.57674278594607,5.56796866768033,7.2948495315506,5.45721083371201,4.23569274214923,5.72923460437565,4.80304207676495,3.47231899766054,9.242991383704,10.0590591631526,6.66100267549725,8.41668661102911,6.61774257358547,6.26043156175138
|phase1_expression=19.2178616525753,1.04692622291808,0.909998478779072,0,0.500895729946347,1.51091344720701,1.16806320297763,10.0716192284429,2.25261955442667,3.97909694747389,2.05461561870606,0.957265907944037,7.36163138704185,8.13009742496676,1.33243904726265,3.03712901084739,2.09868563438444,8.67520954735154,10.1464680868247,8.91218268775863,15.90309525825,3.67376519443276,7.31359409589019,1.75991665072747,3.21172993494038,0,0,1.29282739611533,0.760093677825496,1.26015064879965,1.55211357458713,0.635030673459631,0.61506478758457,15.8481681015439,3.75507105676657,2.1610503896604,1.42918549383658,2.09265815368454,2.3440060335714,0.523523743973798,5.88231488031014,0.683045484958446,0.971020706062307,8.68688044031483,4.66333883609767,5.68994931701213,5.47673941043627,6.32272953503295,6.15121311656521,7.19390626574849,10.2190087786515,2.87505128729943,9.2280433331755,7.25362142011344,8.73843877770406,3.60163210450326,7.44986943840768,2.57836046138721,13.3528864167335,12.1667925232568,12.0427966666174,1.0165335962074,2.66788438833342,1.7997994345628,2.96659908770092,1.4209602298922,1.79760066311043,1.53687322128622,4.97710139080693,5.13022565660425,3.78584930432488,6.85562362569129,5.30084498283872,4.65465037016825,4.69642807989358,8.27296907949019,24.2254938198655,15.1947932321373,17.664751324468,10.2871304429551,8.87430142943374,6.25096044668112,15.0758819460746,19.1339287410771,17.72459674211,10.3120004915784,9.25415925194169,9.31997229126503,1.8931548333296,3.02286240427142,9.85539261585705,0.860423876981386,0.679971333707751,2.69851595818909,1.29955283489534,2.68816132258401,6.60088774619234,9.88495870952735,3.37721805983729,4.59341446863442,17.0420537929783,6.41632387071589,0,0,1.29894624606728,1.26679932737549,1.51657333504435,3.53970027129086,14.2415836005944,12.3206975423805,6.93941307064543,8.8294988710521,5.99600292865752,8.13902258984162,14.4634109776917,9.80199412371469,5.93267922562497,11.2787498397531,1.76922110389975,5.01477234836968,2.65009822152472,1.45462575940567,3.72783522436244,18.1524094147159,12.3573557019938,4.34276993854605,3.23500836165985,1.19980546198682,3.55796635804581,31.4560342750128,28.3650373747548,9.1727677042391,27.638066910572,19.6900902144355,22.8566849015516,25.9586020908412,8.45266719957625,8.33526703087623,28.8103944614389,23.7799297151716,10.0192741081282,7.81667155073808,6.84236093260327,11.7549757911858,14.5598108183842,17.4234659587396,12.2749259173245,63.3823258310588,4.74249584452253,8.50977360755187,6.51019159406611,6.35667624039967,5.56094498451196,7.66154766348766,6.37924622864625,5.37392520409932,2.80885274925294,2.83082697826187,3.40996199274711,4.55676699578104,6.80125573945179,4.68161359798639,3.78791576936336,5.3126342571799,4.78228049950873,9.30135779001631,4.82892122519315,10.6256461554124,4.77223564749093,8.04420573987567,8.18794976413143,7.45619935869195,6.14740322814942,11.4075455946316,25.4450837762594,8.54108282748061,1.65209391491899,0.264450566663544,8.95810652247983,6.96710015581316,5.15469845288373,4.23535401709019,3.11329261382818,3.80451252225118,0.474529061544512,3.29397909448022,5.27803938480566,6.56556357735798,3.50935356814416,1.79763881730844,2.80979464837102,5.37681437786791,7.58671603812327,7.99739588268102,13.5249282807697,8.5533557695032,8.53390943537553,9.46833568519301,11.9517055164846,16.8275568696746,15.6998727841375,16.7820142933649,0.592905254174298,0.667380422864376,1.17935397067922,1.34917267430912,1.62288097110802,0.72353147925725,1.52775511068852,0.575392274901621,2.7562988551756,0.274561413188081,0,5.20997326735905,3.12037673114561,1.26289438973556,1.25578189465339,3.37710464954357,13.8564892624954,3.60033682363921,5.0519142697028,5.60158783058121,6.80601720036656,7.03526281255626,9.28370199455454,7.80534591431195,8.35466263762812,7.30833475840957,7.65382889555938,10.9788420859544,5.87128938344045,10.9933284521949,6.03165135757089,3.26343410291226,3.44234991113325,3.58717770196152,25.5275438080589,18.9882932279369,6.39346286969034,3.28212205365685,4.10160685241134,1.17131623288992,8.40151251157916,4.30143836314594,4.23317480756549,4.81230102341015,2.42886421004937,7.89090816360542,5.92931666919785,32.7747742750243,14.7617688616599,10.6839362200353,12.2165219515182,14.5173708215831,9.2921596837974,8.98288353773431,8.46505959501303,4.71512699389745,5.90603785761546,7.68587869859819,7.49442050187841,10.1789444253702,7.84294232446387,4.10847785316561,4.21674434299995,3.09406629744561,48.3424240170379,9.72329907769075,12.1597162755789,14.5749183821483,19.8621061679346,18.5503570306153,23.3659609255012,29.2286351150015,4.22409074514679,7.20229040936989,9.92377791247329,4.78170133530292,9.20347232166662,4.88534691918062,6.32673423216623,4.76008609260678,4.37221254944776,20.7676338251771,2.22132145037209,5.98521917093345,3.1483069652851,1.88368457004691,3.69074414846768,2.0590035588587,7.81900777971734,5.318155188299,4.14599921413271,6.68269432610579,5.3777118908793,6.91286188231286,5.29226170026826,4.59994251231831,6.33251434863915,5.52943820177765,6.86023682520288,4.18809507174447,7.64728342421578,9.32008969630389,37.7674268918407,3.88743019714345,5.46013018508422,5.25018208528929,3.35815541042101,7.60302564708502,10.4447942394721,5.7289929331338,11.953965264531,53.3900907025473,45.5087409887427,4.74016680942267,6.08175645870493,5.34096977257102,5.45667456506739,3.58053391334963,3.77494574084403,4.20684073319891,3.54454865218985,4.34155734777035,3.27689268616499,3.32726410951574,3.80085734885034,2.30908419936791,3.27255326108393,10.4295976462997,1.33191572024439,1.61484941897056,2.3503846290971,11.3981860478992,6.56888664079137,10.6227942075014,7.28852488868824,14.0440189129902,24.2843292325339,16.5717085142584,14.8952833494243,20.7942350635862,28.773465830367,19.6402413321322,20.2506750069542,21.1650965515384,23.1102628581944,26.9235362110946,5.70830411712972,5.1873233542134,8.87814749921498,5.59145449257076,7.1268475293514,4.04455718590031,5.778414922842,5.97501665992793,8.3438994493872,5.55933865880354,6.33698249725599,5.47016390019621,5.61849044819294,4.9939618875798,4.70970845436029,5.23923060411381,2.89710814862139,3.47236596834669,4.94503080963968,5.4463600449727,5.14303878578123,6.38912902173615,4.76872379894642,4.65108533223451,6.68176600948847,4.90764725771724,4.024415403201,6.57674278594607,5.56796866768033,7.2948495315506,5.45721083371201,4.23569274214923,5.72923460437565,4.80304207676495,3.47231899766054,9.242991383704,10.0590591631526,6.66100267549725,8.41668661102911,6.61774257358547,6.26043156175138
|short_description=p1@Bbs2
}}
}}

Revision as of 01:49, 19 April 2012

Short description:p1@Bbs2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bbs2_5end
Coexpression cluster:NA
Association with transcript: 422bp_to_ENSMUST00000034206, NM_026116, uc009mvs.1_5end
EntrezGene:Bbs2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bbs2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.17
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E910.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.98
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A410.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.91
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.90
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G95.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.32
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A29.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.74
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.45
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E312.17
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.98
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.13
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.70
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D324.23
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D717.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.29
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.87
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E519.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I617.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.32
Mouse Schwann, donor1.CNhs12507.11728-123D91.89
Mouse Schwann, donor2.CNhs12573.11746-123F93.02
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.30
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H914.24
adrenal gland, adult.CNhs10508.49-24D712.32
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D68.83
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C114.46
adrenal gland, neonate N25.CNhs11223.1377-27I39.80
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H111.28
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B218.15
cerebellum, neonate N30.CNhs11135.1395-42I212.36
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A431.46
corpus striatum, adult.CNhs10487.19-21D828.37
corpus striatum, neonate N00.CNhs11226.630-43F19.17
cortex, adult.CNhs10473.12-14D527.64
cortex, neonate N30.CNhs11107.1392-42F219.69
diencephalon, adult.CNhs10482.20-12F222.86
diencephalon, neonate N30.CNhs11201.1388-42B225.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.45
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.34
epididymis, adult.CNhs10490.58-23B228.81
eyeball, adult.CNhs10484.31-12G423.78
eyeball, embryo E12.CNhs11016.345-16C610.02
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D411.75
eyeball, neonate N00.CNhs11207.633-15C614.56
eyeball, neonate N01.CNhs11140.1532-43E717.42
eyeball, neonate N02.CNhs11205.1551-44G812.27
eyeball, neonate N16.CNhs11188.777-19A263.38
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H28.51
forelimb, embryo E13.CNhs10589.384-1E26.51
forelimb, embryo E14.CNhs10577.413-26A86.36
forelimb, embryo E15.CNhs11007.437-20E75.56
forelimb, embryo E17.CNhs10598.1517-43C47.66
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F56.80
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C64.78
heart, embryo E17.CNhs11025.479-18E59.30
heart, embryo E18.CNhs11030.1283-20G34.83
heart, neonate N00.CNhs11213.639-21E310.63
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G18.19
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E825.45
hippocampus, neonate N00.CNhs11228.627-43G18.54
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I58.96
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D85.15
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F26.57
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F88.00
kidney, embryo E16.CNhs10584.464-22A513.52
kidney, embryo E17.CNhs11028.483-18I28.55
kidney, embryo E18.CNhs11001.1288-20C78.53
kidney, neonate N00.CNhs11214.646-21G79.47
kidney, neonate N10.CNhs11206.758-6D511.95
kidney, neonate N20.CNhs11113.832-19I116.83
kidney, neonate N25.CNhs11122.1353-25F315.70
kidney, neonate N30.CNhs11203.1385-42H116.78
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H25.21
liver, neonate N10.CNhs11115.751-24B93.12
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B113.86
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C55.60
lung, embryo E16.CNhs10998.458-17B66.81
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C67.81
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E67.65
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C75.87
lung, neonate N30.CNhs11133.1394-42H210.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H23.59
medulla oblongata, adult.CNhs10477.17-12C225.53
medulla oblongata, neonate N30.CNhs11200.1396-42A318.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.39
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.40
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.93
olfactory brain, adult.CNhs10489.18-22I932.77
ovary, adult.CNhs10507.91-2I714.76
ovary, embryo E18.CNhs11040.505-44H710.68
ovary, neonate N00.CNhs11217.1299-22I412.22
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F48.98
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I77.69
pancreas, neonate N00.CNhs11105.645-26G97.49
pancreas, neonate N01.CNhs11138.1531-43D710.18
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G848.34
pituitary gland, embryo E12.CNhs11018.346-16E69.72
pituitary gland, embryo E13.CNhs11009.370-44C712.16
pituitary gland, embryo E14.CNhs11037.398-44A514.57
pituitary gland, embryo E15.CNhs10592.427-16B919.86
pituitary gland, embryo E16.CNhs11036.449-43F618.55
pituitary gland, embryo E17.CNhs11039.1265-44F523.37
pituitary gland, neonate N00.CNhs11190.1308-22E929.23
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G37.20
prostate, adult.CNhs10470.859-1F89.92
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G49.20
skin, neonate N03.CNhs11215.662-22H34.89
skin, neonate N06.CNhs11097.693-20I56.33
skin, neonate N10.CNhs11108.762-6C44.76
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C920.77
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C15.99
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.32
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D34.15
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D54.60
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B85.53
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I17.65
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G537.77
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G55.25
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G57.60
testis, neonate N00.CNhs11189.1300-22B710.44
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D911.95
testis, neonate N20.CNhs11110.839-18H353.39
testis, neonate N30.CNhs11130.1391-42E245.51
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C13.58
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F84.21
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C44.34
thymus, neonate N07.CNhs11211.713-19D33.28
thymus, neonate N10.CNhs11194.748-24E43.33
thymus, neonate N20.CNhs11186.820-7A23.80
thymus, neonate N25.CNhs11125.1362-25G72.31
thymus, neonate N30.CNhs11132.1393-42G23.27
tongue, adult.CNhs10499.32-1B410.43
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.35
urinary bladder, adult.CNhs10481.879-12E411.40
uterus, adult pregnant day19.CNhs10497.590-15F56.57
uterus, adult.CNhs10509.92-27E510.62
vagina, adult.CNhs10502.89-27D57.29
vesicular gland, adult.CNhs10491.51-27F814.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A124.28
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A314.90
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A428.77
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A620.25
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A721.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A926.92
whole body, embryo E11.CNhs11014.324-5I85.71
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H28.88
whole body, embryo E14.5.CNhs10578.420-27D25.59
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.34
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.47
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.39
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I59.24
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D16.62
whole body, neonate N10.CNhs10518.761-6B46.26





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:96622242..96622288,-&oldid=997652"