Personal tools

FFCP PHASE1:Mm9::chr7:28516417..28516460,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:28516417..28516460,+
|short_description=p1@Zfp60
|description=CAGE_peak_1_at_Zfp60_5end
|association_with_transcript=0bp_to_ENSMUST00000126884,ENSMUST00000130997,NM_009560,NM_029531,uc009fwz.1,uc009fxa.1,uc012fgm.1_5end
|EntrezGene=22718
|EntrezGene=22718
|HGNC=
|HGNC=
|UniProt=D3YUF8,Q8K0D9,Q52KI6
|UniProt=D3YUF8,Q8K0D9,Q52KI6
|association_with_transcript=0bp_to_ENSMUST00000126884,ENSMUST00000130997,NM_009560,NM_029531,uc009fwz.1,uc009fxa.1,uc012fgm.1_5end
|description=CAGE_peak_1_at_Zfp60_5end
|id=chr7:28516417..28516460,+
|ontology_enrichment_disease=
|phase1_expression=8.96833543786846,3.48975407639361,2.27499619694768,1.20985684522732,0.500895729946347,2.85394762250213,3.03696432774183,5.03580961422147,2.53419699873,2.57470978954193,3.4243593645101,3.35043067780413,6.33442700745461,7.51815460803378,2.6648780945253,3.84703008040669,2.09868563438444,6.94016763788123,5.75880621144103,7.21462408056651,5.86798702042381,7.04965753526286,6.26879493933445,2.55987876469451,2.52350209173887,0,0.86152399231815,2.37018355954478,3.04037471130198,4.03248207615889,1.33038306393183,1.90509202037889,1.23012957516914,0,4.62162591602039,3.82339684324532,4.28755648150975,1.67412652294763,3.1253413780952,1.57057123192139,1.76469446409304,2.73218193983378,0.971020706062307,9.31636453019272,6.48812359804893,7.52541683862894,0.782391344348039,2.18025156380447,2.41654801007919,2.52758868796568,2.51975558925653,1.43752564364972,2.68452169692378,1.45072428402269,2.35265659399725,2.31533492432352,5.15760191889762,4.64104883049698,12.1389876515759,4.23192783417626,10.1413024560989,1.35537812827653,0.889294796111139,0,0,1.4209602298922,3.29560121570245,3.45796474789399,16.1755795201225,10.6654691282036,11.3575479129746,5.42736870367227,6.62605622854841,16.2912762955889,11.7889929352431,7.35375029288017,19.82085857989,13.5348578370299,13.6709814598057,10.0233578674947,12.8997577479398,12.5019208933622,7.2587579740359,16.3201156909187,19.2525792198781,17.3830865429464,18.6506901846825,13.6071595452469,14.0850719599722,20.3287496687253,6.37701875143691,3.44169550792555,0.679971333707751,2.69851595818909,5.19821133958135,5.37632264516803,3.7919993435573,5.96506129023202,6.75443611967459,5.3000936176551,11.2674735821344,14.115912515575,2.54805239706646,7.11066703153331,2.16491041011214,2.02687892380079,0,6.73684890342454,15.7952109024775,4.60170631100957,7.98032503124225,7.61163695780353,4.84292544237723,7.23468674652588,7.76085467095652,3.76999773989026,4.20231445148436,7.22996784599558,0.884610551949874,5.3383060482645,4.19598885074748,6.30337829075789,1.86391761218122,16.1029438356351,8.79676168616511,1.02182822083437,2.87556298814209,0,2.54140454146129,17.2259235315546,17.8425235099264,26.6387226479273,12.1677024134594,14.0643501531682,17.6619837875626,14.2772311499627,5.70300437561771,6.71797641294502,6.06534620240819,6.10281382070775,21.8602344177342,15.1735388926092,21.9675798362526,21.4000841326715,12.3826428455417,21.0106501267154,13.5867500611607,10.3481348295606,9.48499168904506,18.1541836961106,17.243210168067,9.64461222681329,12.5121262151519,8.70630416305416,9.67176041117334,15.723707078661,0.702213187313235,1.54408744268829,0.284163499395593,7.66365358381357,11.4917769390737,8.10279276574567,8.52281048106757,8.85439042863317,9.2560267732427,6.97601834251224,8.31647544338819,4.78737903705395,6.08871444679878,4.76085645829376,4.37771571547621,4.09359964790931,4.39100230582101,3.75777972529041,15.3511662451813,33.0323805737503,3.96502539580558,2.64450566663544,17.4896365438892,14.3986736553472,10.6959992897337,6.45387278794696,6.22658522765637,4.75564065281398,4.74529061544512,3.62337700392824,6.28338022000674,3.78017296878187,5.65395852645448,2.69645822596266,4.75503709724327,4.38110801159608,4.1726938209678,13.0243304375091,10.1436962105772,9.9789150644204,9.69762435838129,6.73303870947058,9.42224403151434,7.38050739898011,8.63493003127561,6.04646103216823,7.70776830426587,5.17219827719892,3.53806191203765,3.82265591054251,3.24576194221605,2.41177159752417,3.05551022137704,3.16465751195892,2.2698931748505,4.3929826110093,8.62609239164127,3.72140947668503,5.92871578917665,4.79899868099512,3.94674309748207,4.82443521363367,4.43407656399851,11.3694847062291,9.77789858652155,14.428332290891,14.7854856421756,8.71032538697442,10.9500074807566,6.24427673144956,7.72412206120336,7.30833475840957,7.33491935824441,6.39066927391378,8.46156411142888,6.50920763616802,6.03165135757089,3.80733978673097,6.88469982226651,5.79467167239938,13.9679013289379,16.5268478095006,8.52461715958712,4.29200576247434,11.6738041184015,12.8844785617891,11.6328634775711,14.0991590792006,12.6995244226965,20.0984336860071,9.31064613852257,16.3663280430335,19.7643888973262,16.708708453934,6.38730383437209,7.83488656135923,7.4928001302645,8.08353602565424,7.96470830039777,10.1967867185092,7.86041248108353,6.60117779145643,3.54362271456927,7.07100840271033,6.20227903603731,6.18007340111759,9.9819265947722,9.16506598013866,2.10837217149998,5.15677716240934,17.0219802876894,19.6266592494128,6.59729287292048,14.3605813471167,14.1872186913819,17.658512942605,16.6194510808142,5.17590413494819,5.39744928546534,4.02480934641258,5.73373834942901,10.0580614294303,4.35953952078945,9.288190438936,4.53614907211919,5.58079059133208,4.66369338607761,14.0923229527987,3.2465467351592,9.70018279427146,7.22258656741876,3.01389531207506,3.41735569302563,3.43167259809784,2.54967644990783,2.09927178485487,1.79659965945751,1.90934123603023,13.91878371757,14.6390016331331,11.7725821495763,10.4544148007234,9.60795280483181,6.20375993370175,5.20716771069616,5.23511883968059,4.14767914533737,4.97071450469541,2.81846469342095,18.6895682554973,11.5820943319968,14.0004855607714,11.2369046425626,13.0096216627899,7.51086327332825,11.8485990207995,8.703325587334,4.59009829569411,3.45636007509439,5.37218905067903,6.68993210457542,7.80603274452687,7.27556608675652,6.08690765269437,7.9472541912506,6.25016337503838,4.72606486958647,6.86571859647404,4.49620159264499,5.74709255279991,6.82205165178267,7.69694733122636,7.12949103307571,5.66825959038028,5.54964883435162,5.02397597013064,5.20442310728643,6.56844619709447,3.56596703357246,6.95976172215607,4.93047271881851,9.02829787263654,10.7302850097243,9.20650473014354,12.6037012956667,12.7171354934329,13.7016503954128,15.8632718451837,9.45031500324528,12.158672487054,9.06284817968409,12.4262474820437,27.9187965001435,19.5522187966505,15.8782253351345,15.0726164582342,10.8998844566551,12.3175150661509,10.2233494788743,9.06554251851134,12.194929964489,8.33900798820532,11.1530891951705,8.48818536237343,14.7953581802414,12.22880410933,13.4973352045691,9.52587382566147,9.73428337936786,11.5745532278223,10.3021475200827,10.745521169811,10.2860775715625,11.0034999818789,12.637118067208,11.9184061638509,10.4461412261017,11.8460451048347,10.2439664808753,15.2580432633949,10.0495044245938,6.17256498823512,7.71127617807132,8.66839444904958,11.0492381655816,10.5357052006457,9.06661071611365,8.74337022782811,6.31615342802603,8.16510005383534,3.25190164517034,5.7353768971074,6.95603506861264
|phase1_expression=8.96833543786846,3.48975407639361,2.27499619694768,1.20985684522732,0.500895729946347,2.85394762250213,3.03696432774183,5.03580961422147,2.53419699873,2.57470978954193,3.4243593645101,3.35043067780413,6.33442700745461,7.51815460803378,2.6648780945253,3.84703008040669,2.09868563438444,6.94016763788123,5.75880621144103,7.21462408056651,5.86798702042381,7.04965753526286,6.26879493933445,2.55987876469451,2.52350209173887,0,0.86152399231815,2.37018355954478,3.04037471130198,4.03248207615889,1.33038306393183,1.90509202037889,1.23012957516914,0,4.62162591602039,3.82339684324532,4.28755648150975,1.67412652294763,3.1253413780952,1.57057123192139,1.76469446409304,2.73218193983378,0.971020706062307,9.31636453019272,6.48812359804893,7.52541683862894,0.782391344348039,2.18025156380447,2.41654801007919,2.52758868796568,2.51975558925653,1.43752564364972,2.68452169692378,1.45072428402269,2.35265659399725,2.31533492432352,5.15760191889762,4.64104883049698,12.1389876515759,4.23192783417626,10.1413024560989,1.35537812827653,0.889294796111139,0,0,1.4209602298922,3.29560121570245,3.45796474789399,16.1755795201225,10.6654691282036,11.3575479129746,5.42736870367227,6.62605622854841,16.2912762955889,11.7889929352431,7.35375029288017,19.82085857989,13.5348578370299,13.6709814598057,10.0233578674947,12.8997577479398,12.5019208933622,7.2587579740359,16.3201156909187,19.2525792198781,17.3830865429464,18.6506901846825,13.6071595452469,14.0850719599722,20.3287496687253,6.37701875143691,3.44169550792555,0.679971333707751,2.69851595818909,5.19821133958135,5.37632264516803,3.7919993435573,5.96506129023202,6.75443611967459,5.3000936176551,11.2674735821344,14.115912515575,2.54805239706646,7.11066703153331,2.16491041011214,2.02687892380079,0,6.73684890342454,15.7952109024775,4.60170631100957,7.98032503124225,7.61163695780353,4.84292544237723,7.23468674652588,7.76085467095652,3.76999773989026,4.20231445148436,7.22996784599558,0.884610551949874,5.3383060482645,4.19598885074748,6.30337829075789,1.86391761218122,16.1029438356351,8.79676168616511,1.02182822083437,2.87556298814209,0,2.54140454146129,17.2259235315546,17.8425235099264,26.6387226479273,12.1677024134594,14.0643501531682,17.6619837875626,14.2772311499627,5.70300437561771,6.71797641294502,6.06534620240819,6.10281382070775,21.8602344177342,15.1735388926092,21.9675798362526,21.4000841326715,12.3826428455417,21.0106501267154,13.5867500611607,10.3481348295606,9.48499168904506,18.1541836961106,17.243210168067,9.64461222681329,12.5121262151519,8.70630416305416,9.67176041117334,15.723707078661,0.702213187313235,1.54408744268829,0.284163499395593,7.66365358381357,11.4917769390737,8.10279276574567,8.52281048106757,8.85439042863317,9.2560267732427,6.97601834251224,8.31647544338819,4.78737903705395,6.08871444679878,4.76085645829376,4.37771571547621,4.09359964790931,4.39100230582101,3.75777972529041,15.3511662451813,33.0323805737503,3.96502539580558,2.64450566663544,17.4896365438892,14.3986736553472,10.6959992897337,6.45387278794696,6.22658522765637,4.75564065281398,4.74529061544512,3.62337700392824,6.28338022000674,3.78017296878187,5.65395852645448,2.69645822596266,4.75503709724327,4.38110801159608,4.1726938209678,13.0243304375091,10.1436962105772,9.9789150644204,9.69762435838129,6.73303870947058,9.42224403151434,7.38050739898011,8.63493003127561,6.04646103216823,7.70776830426587,5.17219827719892,3.53806191203765,3.82265591054251,3.24576194221605,2.41177159752417,3.05551022137704,3.16465751195892,2.2698931748505,4.3929826110093,8.62609239164127,3.72140947668503,5.92871578917665,4.79899868099512,3.94674309748207,4.82443521363367,4.43407656399851,11.3694847062291,9.77789858652155,14.428332290891,14.7854856421756,8.71032538697442,10.9500074807566,6.24427673144956,7.72412206120336,7.30833475840957,7.33491935824441,6.39066927391378,8.46156411142888,6.50920763616802,6.03165135757089,3.80733978673097,6.88469982226651,5.79467167239938,13.9679013289379,16.5268478095006,8.52461715958712,4.29200576247434,11.6738041184015,12.8844785617891,11.6328634775711,14.0991590792006,12.6995244226965,20.0984336860071,9.31064613852257,16.3663280430335,19.7643888973262,16.708708453934,6.38730383437209,7.83488656135923,7.4928001302645,8.08353602565424,7.96470830039777,10.1967867185092,7.86041248108353,6.60117779145643,3.54362271456927,7.07100840271033,6.20227903603731,6.18007340111759,9.9819265947722,9.16506598013866,2.10837217149998,5.15677716240934,17.0219802876894,19.6266592494128,6.59729287292048,14.3605813471167,14.1872186913819,17.658512942605,16.6194510808142,5.17590413494819,5.39744928546534,4.02480934641258,5.73373834942901,10.0580614294303,4.35953952078945,9.288190438936,4.53614907211919,5.58079059133208,4.66369338607761,14.0923229527987,3.2465467351592,9.70018279427146,7.22258656741876,3.01389531207506,3.41735569302563,3.43167259809784,2.54967644990783,2.09927178485487,1.79659965945751,1.90934123603023,13.91878371757,14.6390016331331,11.7725821495763,10.4544148007234,9.60795280483181,6.20375993370175,5.20716771069616,5.23511883968059,4.14767914533737,4.97071450469541,2.81846469342095,18.6895682554973,11.5820943319968,14.0004855607714,11.2369046425626,13.0096216627899,7.51086327332825,11.8485990207995,8.703325587334,4.59009829569411,3.45636007509439,5.37218905067903,6.68993210457542,7.80603274452687,7.27556608675652,6.08690765269437,7.9472541912506,6.25016337503838,4.72606486958647,6.86571859647404,4.49620159264499,5.74709255279991,6.82205165178267,7.69694733122636,7.12949103307571,5.66825959038028,5.54964883435162,5.02397597013064,5.20442310728643,6.56844619709447,3.56596703357246,6.95976172215607,4.93047271881851,9.02829787263654,10.7302850097243,9.20650473014354,12.6037012956667,12.7171354934329,13.7016503954128,15.8632718451837,9.45031500324528,12.158672487054,9.06284817968409,12.4262474820437,27.9187965001435,19.5522187966505,15.8782253351345,15.0726164582342,10.8998844566551,12.3175150661509,10.2233494788743,9.06554251851134,12.194929964489,8.33900798820532,11.1530891951705,8.48818536237343,14.7953581802414,12.22880410933,13.4973352045691,9.52587382566147,9.73428337936786,11.5745532278223,10.3021475200827,10.745521169811,10.2860775715625,11.0034999818789,12.637118067208,11.9184061638509,10.4461412261017,11.8460451048347,10.2439664808753,15.2580432633949,10.0495044245938,6.17256498823512,7.71127617807132,8.66839444904958,11.0492381655816,10.5357052006457,9.06661071611365,8.74337022782811,6.31615342802603,8.16510005383534,3.25190164517034,5.7353768971074,6.95603506861264
|short_description=p1@Zfp60
}}
}}

Revision as of 22:46, 18 April 2012

Short description:p1@Zfp60
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Zfp60_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000126884, ENSMUST00000130997, NM_009560, NM_029531, uc009fwz.1, uc009fxa.1, uc012fgm.1_5end
EntrezGene:Zfp60
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Zfp60

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.85
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.04
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.33
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E87.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.85
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.76
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.05
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.27
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C14.03
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D96.49
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.18
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.42
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C710.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D516.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.90
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.61
Mouse Schwann, donor1.CNhs12507.11728-123D914.09
Mouse Schwann, donor2.CNhs12573.11746-123F920.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.74
accessory axillary lymph node, adult.CNhs10475.1063-29H915.80
adrenal gland, adult.CNhs10508.49-24D74.60
adrenal gland, embryo E14.CNhs11038.406-44C57.98
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F57.23
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.77
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B216.10
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.54
corpora quadrigemina, adult.CNhs10501.16-22A417.23
corpus striatum, adult.CNhs10487.19-21D817.84
corpus striatum, neonate N00.CNhs11226.630-43F126.64
cortex, adult.CNhs10473.12-14D512.17
cortex, neonate N30.CNhs11107.1392-42F214.06
diencephalon, adult.CNhs10482.20-12F217.66
diencephalon, neonate N30.CNhs11201.1388-42B214.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.72
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C621.86
eyeball, embryo E14.CNhs10521.399-16E215.17
eyeball, embryo E15.CNhs10593.426-16C921.97
eyeball, embryo E17.CNhs11023.1261-18D421.40
eyeball, neonate N00.CNhs11207.633-15C612.38
eyeball, neonate N01.CNhs11140.1532-43E721.01
eyeball, neonate N02.CNhs11205.1551-44G813.59
eyeball, neonate N16.CNhs11188.777-19A210.35
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H218.15
forelimb, embryo E13.CNhs10589.384-1E217.24
forelimb, embryo E14.CNhs10577.413-26A89.64
forelimb, embryo E15.CNhs11007.437-20E712.51
forelimb, embryo E17.CNhs10598.1517-43C48.71
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I615.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E97.66
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I98.10
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C88.85
heart, embryo E16.CNhs11021.457-17C69.26
heart, embryo E17.CNhs11025.479-18E56.98
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E34.79
heart, neonate N03.CNhs11221.1349-25I26.09
heart, neonate N10.CNhs11118.749-24G14.76
heart, neonate N16.CNhs11209.782-15G14.38
heart, neonate N20.CNhs11127.821-26I64.09
heart, neonate N25.CNhs11196.1351-25D34.39
heart, neonate N30.CNhs11202.1390-42D23.76
hippocampus, adult.CNhs10478.13-16E815.35
hippocampus, neonate N00.CNhs11228.627-43G133.03
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I517.49
intestine, embryo E13.CNhs11010.381-16D514.40
intestine, embryo E15.CNhs10602.976-16D810.70
intestine, embryo E16.CNhs10585.463-22H46.45
intestine, embryo E17.CNhs10582.482-18D36.23
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B86.28
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.76
intestine, neonate N30.CNhs11131.1384-42G14.38
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F813.02
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I29.98
kidney, embryo E18.CNhs11001.1288-20C79.70
kidney, neonate N00.CNhs11214.646-21G76.73
kidney, neonate N10.CNhs11206.758-6D59.42
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H16.05
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F85.17
liver, embryo E13.CNhs10524.378-3H63.54
liver, embryo E14.CNhs10594.409-16E13.82
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G24.39
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A34.80
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B14.43
lung, embryo E12.CNhs10522.354-16G211.37
lung, embryo E14.CNhs10604.404-26F89.78
lung, embryo E15.CNhs11020.432-17C514.43
lung, embryo E16.CNhs10998.458-17B614.79
lung, embryo E17.CNhs10605.480-44A68.71
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E57.72
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E67.33
lung, neonate N20.CNhs11109.822-18A46.39
lung, neonate N25.CNhs11119.1359-25C78.46
lung, neonate N30.CNhs11133.1394-42H26.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.81
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C213.97
medulla oblongata, neonate N30.CNhs11200.1396-42A316.53
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.88
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.63
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.10
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.70
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.10
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.37
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I916.71
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I47.49
oviduct, adult pregnant day01.CNhs10500.988-6G68.08
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F410.20
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G33.54
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E619.63
pituitary gland, embryo E13.CNhs11009.370-44C76.60
pituitary gland, embryo E14.CNhs11037.398-44A514.36
pituitary gland, embryo E15.CNhs10592.427-16B914.19
pituitary gland, embryo E16.CNhs11036.449-43F617.66
pituitary gland, embryo E17.CNhs11039.1265-44F516.62
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I75.40
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C310.06
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H39.29
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C45.58
small intestine, neonate N16.CNhs11114.790-21I14.66
spinal cord, adult.CNhs10505.24-13C914.09
spleen, adult.CNhs10465.25-2G23.25
spleen, embryo E16.CNhs11035.461-43C19.70
spleen, embryo E18.CNhs11011.1271-21F27.22
spleen, neonate N10.CNhs11116.752-24D13.01
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.10
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E313.92
stomach, embryo E15.CNhs10603.1252-16G814.64
stomach, embryo E16.CNhs11022.459-17D411.77
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B86.20
stomach, neonate N07.CNhs11210.718-18A95.21
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I14.15
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F518.69
testis, embryo E15.CNhs11034.443-27C511.58
testis, embryo E16.CNhs11033.470-26G514.00
testis, embryo E17.CNhs11029.486-18I511.24
testis, embryo E18.CNhs11027.503-18G513.01
testis, neonate N00.CNhs11189.1300-22B77.51
testis, neonate N07.CNhs11222.726-26I411.85
testis, neonate N10.CNhs11204.763-44D98.70
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B55.37
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C16.09
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F86.25
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C46.87
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E45.75
thymus, neonate N20.CNhs11186.820-7A26.82
thymus, neonate N25.CNhs11125.1362-25G77.70
thymus, neonate N30.CNhs11132.1393-42G27.13
tongue, adult.CNhs10499.32-1B45.67
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.02
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.20
urinary bladder, adult.CNhs10481.879-12E46.57
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F89.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D712.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.06
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I827.92
whole body, embryo E12.CNhs10587.857-27C919.55
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D215.07
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F212.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.57
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G510.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G511.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.24
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.05
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G510.54
whole body, embryo E17.5.CNhs10513.490-9F99.07
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C63.25
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B46.96





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:28516417..28516460,%2B&oldid=970157"