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FFCP PHASE1:Mm9::chr7:17509224..17509240,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:17509224..17509240,-
|short_description=p3@Calm2,p4@Calm1,p4@Calm3
|description=CAGE_peak_3_at_Calm2_5end,CAGE_peak_4_at_Calm1_5end,CAGE_peak_4_at_Calm3_5end
|association_with_transcript=-46bp_to_ENSMUST00000173557_5end
|EntrezGene=12313,12314,12315
|EntrezGene=12313,12314,12315
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=-46bp_to_ENSMUST00000173557_5end
|description=CAGE_peak_3_at_Calm2_5end,CAGE_peak_4_at_Calm1_5end,CAGE_peak_4_at_Calm3_5end
|id=chr7:17509224..17509240,-
|ontology_enrichment_disease=
|phase1_expression=22.1005409004616,4.88565570695105,5.45999087267443,2.72217790176147,2.50447864973174,7.05092942029937,6.54115393667472,1.29123323441576,1.83025338797167,1.87251621057595,0.68487187290202,0.319088635981346,1.71200729931206,1.74840804837995,1.99865857089398,2.02475267389826,2.79824751251259,1.73504190947031,1.37114433605739,1.69755860719212,51.7063204118504,9.03547655928056,7.83599367416806,7.67963629408352,8.71755268055246,6.89078356938024,11.630573896295,6.24866574789078,9.69119439227507,6.80481350351813,8.20402889424627,1.27006134691926,0,0,3.75507105676657,3.49092755252834,3.87921776898501,1.25559489221072,2.3440060335714,2.61761871986899,2.35292595212406,1.36609096991689,1.94204141212461,4.53228544712078,3.85232338634155,4.58866880404204,10.1710874765245,13.2995345392072,13.8402295122717,13.2212331370513,6.85933465964276,11.5002051491977,1.8456086666351,0.725362142011344,1.68046899571232,5.14518872071894,6.30373567865265,3.6097046459421,42.0818238587963,47.0801971552109,55.1433321050376,3.04960078862219,5.33576877666684,4.94944844504769,4.94433181283487,2.8419204597844,9.88680364710736,31.890119341689,15.6571314585801,19.4408551197635,17.2466468308133,45.7041575046086,58.309294811226,22.2933254571216,22.6195311603038,19.3035945188104,27.5289702498472,46.4781910630083,40.7057313129045,50.9081070638548,54.2521726562289,45.3194632384381,44.1109138422182,48.3975844627245,36.5187812186576,35.6500588423138,46.982654663704,41.567076419042,1.66597625333005,3.32514864469856,2.89864488701678,1.72084775396277,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,13.6231087527799,4.26075806445144,4.93593408745451,4.24007489412408,16.760366953425,1.28326477414318,0,0,0.865964164044856,1.52015919285059,2.52762222507392,11.0758363327488,4.66088190564909,4.89859058913922,5.55153045651635,6.69824052286711,5.07354093963329,5.42601505989441,5.05631440683531,2.26199864393416,1.73036477414062,1.44599356919912,3.5384422077995,2.91180329905337,5.96272099843063,6.30337829075789,5.59175283654366,28.1069565131085,37.0720671059815,9.96282515313506,3.11519323715393,1.19980546198682,3.17675567682662,46.435098215495,59.0175777636028,41.717244901471,57.7096743038358,62.9060025032613,59.8429568331533,55.6487532322409,3.25885964321012,5.10068579501381,2.77995034277042,3.57751155007006,8.97831056442656,12.1848115349741,15.48534316326,12.0563854268572,11.838350852331,13.3238269096244,13.0245397138023,12.9351685369508,5.82033580918674,5.10586416453112,5.10258260075452,5.69908904311695,6.39508673218875,1.39300866608867,2.46938563689532,5.57295947091781,2.80885274925294,2.57347907114715,2.84163499395593,4.55676699578104,3.04883877975425,3.24111710629827,2.13070262026689,3.34499193970586,3.70241070929708,2.32533944750408,4.56064782379353,2.6856028744449,5.26591519723137,2.79084688934462,5.6748166682099,3.65499968563331,3.73235195994786,3.08674763148855,60.7737951350328,35.810805107991,5.94753809370836,4.49565963328025,5.11891801284562,6.96710015581316,6.82997545007095,4.23535401709019,5.78182913996663,6.27744566171445,7.59246498471219,9.38784041926862,11.0587491872119,7.16243299348143,9.35827618171777,6.29173586057955,7.3486936957396,5.97423819763102,7.2073802362171,5.48392860526698,3.38123207019241,5.29493452397817,5.04276466635827,5.11991485199326,4.93244989569207,2.21415221969403,3.45397201251025,4.56569506510662,0.296452627087149,1.66845105716094,1.57247196090562,1.34917267430912,1.21716072833102,1.4470629585145,1.2731292589071,0.575392274901621,1.29708181420028,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.717589654087649,0.964887042726734,5.17308932466493,5.49525094134406,2.93336957595647,3.73439188705414,1.87752198630802,3.68513766371995,3.57065461329021,2.92700471786698,3.62560831444239,4.4292937929755,2.55127629851979,3.76885623846197,1.89953480052485,2.89298117163023,0,0.54390568381871,1.96705709207614,0.275936746304732,47.844075816362,40.9068786206789,5.40985319743029,26.7619182836635,3.78609863299508,6.63745865304285,7.53981892064796,4.77937595905104,3.7875774594007,4.24614796183249,4.04810701674894,8.18316402151673,5.13874111330481,34.7027021735552,4.40014264145633,4.98583690268315,3.09485222771795,3.95928295134085,6.63725691699814,4.37005145078967,9.67435382287203,9.8074641473067,11.5167738223501,5.53383266299069,3.87642439752332,2.90826983582004,6.06045543254026,3.79244109522979,7.37930260024991,6.18813259489121,5.7874732978144,6.84232157318979,8.79639049722731,7.07312215604255,7.98031051390231,9.45354733290974,7.56925494769756,7.00269382963578,1.64270195644597,0.42366414172764,2.20528398054962,1.97863503529776,2.58343082713449,2.47282992205439,0.954978752025092,0.492422699235184,8.74442509889552,44.1312218785013,1.70870880797853,3.92135049130123,2.77791791054568,3.76736914009382,2.59719032669948,1.83022538565218,3.22959016988325,3.91864066506242,3.17859939750175,6.68269432610579,5.852215881251,7.31950081656655,4.64422965533745,4.80903080833278,2.62035076495413,5.66430254816247,4.95920734352016,2.6175594198403,6.22151871800606,0,322.996053866041,4.63501292736334,5.29467169462712,4.27792614356905,6.19967152693109,4.73077151374179,6.45464812551647,2.73429208172295,3.67007705489988,74.1663250935839,131.917742866102,4.10814456816632,5.6763060281246,5.95723551555998,6.49604114888975,8.23522800070415,6.15912199821921,8.89446326447769,7.67985541307802,8.78408114548884,6.85861259894999,8.36857336635776,7.60171469770069,6.83104075646339,7.94762934834669,0.680191150845634,1.99787358036658,0.358855426437903,1.00730769818447,1.54551675225752,1.68914227906064,2.93042598827624,0.643105137237198,1.50471631210609,75.1119950680698,74.5726883141627,72.184834693364,58.6019351791975,60.2872617398165,61.1869056885657,56.7018900194717,55.8398291998033,50.2988073972467,46.5984280576638,11.8317576245961,11.9707462020309,13.1464876430683,6.56388136084394,11.947950269795,9.00833191405069,9.33436256766784,10.9198580336614,11.2321723357135,6.82282471762253,9.12525479604863,10.7517014590063,8.05316964240989,10.6922004516132,8.09840112274147,8.09699275181225,6.14186927507734,7.33055037762079,5.76920261124629,11.0399190100798,12.0004238334895,7.27650805253284,8.58370283810355,8.57543858130738,7.62285981364178,9.30760686808441,7.3171189149109,8.94437018888666,9.50628796921032,8.97827634652382,8.89762635931306,8.27437651954733,6.13846564754534,8.83139994760006,6.75173138433995,14.7388240983388,9.35726433781634,6.44613162144895,7.46024495068489,4.63241980150983,8.11537424671475
|phase1_expression=22.1005409004616,4.88565570695105,5.45999087267443,2.72217790176147,2.50447864973174,7.05092942029937,6.54115393667472,1.29123323441576,1.83025338797167,1.87251621057595,0.68487187290202,0.319088635981346,1.71200729931206,1.74840804837995,1.99865857089398,2.02475267389826,2.79824751251259,1.73504190947031,1.37114433605739,1.69755860719212,51.7063204118504,9.03547655928056,7.83599367416806,7.67963629408352,8.71755268055246,6.89078356938024,11.630573896295,6.24866574789078,9.69119439227507,6.80481350351813,8.20402889424627,1.27006134691926,0,0,3.75507105676657,3.49092755252834,3.87921776898501,1.25559489221072,2.3440060335714,2.61761871986899,2.35292595212406,1.36609096991689,1.94204141212461,4.53228544712078,3.85232338634155,4.58866880404204,10.1710874765245,13.2995345392072,13.8402295122717,13.2212331370513,6.85933465964276,11.5002051491977,1.8456086666351,0.725362142011344,1.68046899571232,5.14518872071894,6.30373567865265,3.6097046459421,42.0818238587963,47.0801971552109,55.1433321050376,3.04960078862219,5.33576877666684,4.94944844504769,4.94433181283487,2.8419204597844,9.88680364710736,31.890119341689,15.6571314585801,19.4408551197635,17.2466468308133,45.7041575046086,58.309294811226,22.2933254571216,22.6195311603038,19.3035945188104,27.5289702498472,46.4781910630083,40.7057313129045,50.9081070638548,54.2521726562289,45.3194632384381,44.1109138422182,48.3975844627245,36.5187812186576,35.6500588423138,46.982654663704,41.567076419042,1.66597625333005,3.32514864469856,2.89864488701678,1.72084775396277,0.679971333707751,1.07940638327563,0.649776417447669,0.448026887097336,13.6231087527799,4.26075806445144,4.93593408745451,4.24007489412408,16.760366953425,1.28326477414318,0,0,0.865964164044856,1.52015919285059,2.52762222507392,11.0758363327488,4.66088190564909,4.89859058913922,5.55153045651635,6.69824052286711,5.07354093963329,5.42601505989441,5.05631440683531,2.26199864393416,1.73036477414062,1.44599356919912,3.5384422077995,2.91180329905337,5.96272099843063,6.30337829075789,5.59175283654366,28.1069565131085,37.0720671059815,9.96282515313506,3.11519323715393,1.19980546198682,3.17675567682662,46.435098215495,59.0175777636028,41.717244901471,57.7096743038358,62.9060025032613,59.8429568331533,55.6487532322409,3.25885964321012,5.10068579501381,2.77995034277042,3.57751155007006,8.97831056442656,12.1848115349741,15.48534316326,12.0563854268572,11.838350852331,13.3238269096244,13.0245397138023,12.9351685369508,5.82033580918674,5.10586416453112,5.10258260075452,5.69908904311695,6.39508673218875,1.39300866608867,2.46938563689532,5.57295947091781,2.80885274925294,2.57347907114715,2.84163499395593,4.55676699578104,3.04883877975425,3.24111710629827,2.13070262026689,3.34499193970586,3.70241070929708,2.32533944750408,4.56064782379353,2.6856028744449,5.26591519723137,2.79084688934462,5.6748166682099,3.65499968563331,3.73235195994786,3.08674763148855,60.7737951350328,35.810805107991,5.94753809370836,4.49565963328025,5.11891801284562,6.96710015581316,6.82997545007095,4.23535401709019,5.78182913996663,6.27744566171445,7.59246498471219,9.38784041926862,11.0587491872119,7.16243299348143,9.35827618171777,6.29173586057955,7.3486936957396,5.97423819763102,7.2073802362171,5.48392860526698,3.38123207019241,5.29493452397817,5.04276466635827,5.11991485199326,4.93244989569207,2.21415221969403,3.45397201251025,4.56569506510662,0.296452627087149,1.66845105716094,1.57247196090562,1.34917267430912,1.21716072833102,1.4470629585145,1.2731292589071,0.575392274901621,1.29708181420028,0.823684239564244,1.43768206527355,1.11642284300551,0.936113019343682,0.505157755894224,0.717589654087649,0.964887042726734,5.17308932466493,5.49525094134406,2.93336957595647,3.73439188705414,1.87752198630802,3.68513766371995,3.57065461329021,2.92700471786698,3.62560831444239,4.4292937929755,2.55127629851979,3.76885623846197,1.89953480052485,2.89298117163023,0,0.54390568381871,1.96705709207614,0.275936746304732,47.844075816362,40.9068786206789,5.40985319743029,26.7619182836635,3.78609863299508,6.63745865304285,7.53981892064796,4.77937595905104,3.7875774594007,4.24614796183249,4.04810701674894,8.18316402151673,5.13874111330481,34.7027021735552,4.40014264145633,4.98583690268315,3.09485222771795,3.95928295134085,6.63725691699814,4.37005145078967,9.67435382287203,9.8074641473067,11.5167738223501,5.53383266299069,3.87642439752332,2.90826983582004,6.06045543254026,3.79244109522979,7.37930260024991,6.18813259489121,5.7874732978144,6.84232157318979,8.79639049722731,7.07312215604255,7.98031051390231,9.45354733290974,7.56925494769756,7.00269382963578,1.64270195644597,0.42366414172764,2.20528398054962,1.97863503529776,2.58343082713449,2.47282992205439,0.954978752025092,0.492422699235184,8.74442509889552,44.1312218785013,1.70870880797853,3.92135049130123,2.77791791054568,3.76736914009382,2.59719032669948,1.83022538565218,3.22959016988325,3.91864066506242,3.17859939750175,6.68269432610579,5.852215881251,7.31950081656655,4.64422965533745,4.80903080833278,2.62035076495413,5.66430254816247,4.95920734352016,2.6175594198403,6.22151871800606,0,322.996053866041,4.63501292736334,5.29467169462712,4.27792614356905,6.19967152693109,4.73077151374179,6.45464812551647,2.73429208172295,3.67007705489988,74.1663250935839,131.917742866102,4.10814456816632,5.6763060281246,5.95723551555998,6.49604114888975,8.23522800070415,6.15912199821921,8.89446326447769,7.67985541307802,8.78408114548884,6.85861259894999,8.36857336635776,7.60171469770069,6.83104075646339,7.94762934834669,0.680191150845634,1.99787358036658,0.358855426437903,1.00730769818447,1.54551675225752,1.68914227906064,2.93042598827624,0.643105137237198,1.50471631210609,75.1119950680698,74.5726883141627,72.184834693364,58.6019351791975,60.2872617398165,61.1869056885657,56.7018900194717,55.8398291998033,50.2988073972467,46.5984280576638,11.8317576245961,11.9707462020309,13.1464876430683,6.56388136084394,11.947950269795,9.00833191405069,9.33436256766784,10.9198580336614,11.2321723357135,6.82282471762253,9.12525479604863,10.7517014590063,8.05316964240989,10.6922004516132,8.09840112274147,8.09699275181225,6.14186927507734,7.33055037762079,5.76920261124629,11.0399190100798,12.0004238334895,7.27650805253284,8.58370283810355,8.57543858130738,7.62285981364178,9.30760686808441,7.3171189149109,8.94437018888666,9.50628796921032,8.97827634652382,8.89762635931306,8.27437651954733,6.13846564754534,8.83139994760006,6.75173138433995,14.7388240983388,9.35726433781634,6.44613162144895,7.46024495068489,4.63241980150983,8.11537424671475
|short_description=p3@Calm2,p4@Calm1,p4@Calm3
}}
}}

Revision as of 22:27, 18 April 2012

Short description:p3@Calm2, p4@Calm1, p4@Calm3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Calm2_5end, CAGE_peak_4_at_Calm1_5end, CAGE_peak_4_at_Calm3_5end
Coexpression cluster:NA
Association with transcript: -46bp_to_ENSMUST00000173557_5end
EntrezGene:12313,12314,12315
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Calm2p4@Calm1p4@Calm3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G722.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.72
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.71
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.37
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A351.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D28.72
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B99.69
Ileum epithelium, pool2.CNhs13232.10253-104C16.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.20
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C213.30
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.84
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C46.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.15
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.30
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C342.08
Mouse Granule cells, donor2.CNhs12357.11731-123E347.08
Mouse Granule cells, donor3.CNhs12108.11636-122C755.14
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E831.89
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D515.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.44
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D558.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.62
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.48
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.71
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D450.91
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F454.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D845.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E444.11
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E548.40
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I636.52
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F646.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E141.57
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F93.33
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.08
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D74.90
adrenal gland, embryo E14.CNhs11038.406-44C55.55
adrenal gland, embryo E16.CNhs11004.1254-43D66.70
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F55.43
adrenal gland, neonate N00.CNhs11191.1311-23C15.06
adrenal gland, neonate N25.CNhs11223.1377-27I32.26
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B228.11
cerebellum, neonate N30.CNhs11135.1395-42I237.07
colon, adult.CNhs10468.36-18H79.96
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.18
corpora quadrigemina, adult.CNhs10501.16-22A446.44
corpus striatum, adult.CNhs10487.19-21D859.02
corpus striatum, neonate N00.CNhs11226.630-43F141.72
cortex, adult.CNhs10473.12-14D557.71
cortex, neonate N30.CNhs11107.1392-42F262.91
diencephalon, adult.CNhs10482.20-12F259.84
diencephalon, neonate N30.CNhs11201.1388-42B255.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B22.78
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C68.98
eyeball, embryo E14.CNhs10521.399-16E212.18
eyeball, embryo E15.CNhs10593.426-16C915.49
eyeball, embryo E17.CNhs11023.1261-18D412.06
eyeball, neonate N00.CNhs11207.633-15C611.84
eyeball, neonate N01.CNhs11140.1532-43E713.32
eyeball, neonate N02.CNhs11205.1551-44G813.02
eyeball, neonate N16.CNhs11188.777-19A212.94
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E25.10
forelimb, embryo E14.CNhs10577.413-26A85.70
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C83.34
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E52.33
heart, embryo E18.CNhs11030.1283-20G34.56
heart, neonate N00.CNhs11213.639-21E32.69
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E860.77
hippocampus, neonate N00.CNhs11228.627-43G135.81
intestinal mucosa, adult.CNhs10506.860-29I35.95
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I55.12
intestine, embryo E13.CNhs11010.381-16D56.97
intestine, embryo E15.CNhs10602.976-16D86.83
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D35.78
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D17.59
intestine, neonate N01.CNhs11192.1322-23E99.39
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A59.36
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F85.48
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G75.12
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H14.57
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.67
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B15.17
lung, embryo E12.CNhs10522.354-16G25.50
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A63.69
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A34.43
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.77
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C247.84
medulla oblongata, neonate N30.CNhs11200.1396-42A340.91
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C226.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E26.64
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I934.70
ovary, adult.CNhs10507.91-2I74.40
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I43.09
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E59.81
pancreas, embryo E17.CNhs10599.1558-45G311.52
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G93.88
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E66.84
pituitary gland, embryo E13.CNhs11009.370-44C78.80
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B97.98
pituitary gland, embryo E16.CNhs11036.449-43F69.45
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G42.58
skin, neonate N03.CNhs11215.662-22H32.47
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C944.13
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H12.60
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C63.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.18
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E35.85
stomach, embryo E15.CNhs10603.1252-16G87.32
stomach, embryo E16.CNhs11022.459-17D44.64
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I16.22
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G5323.00
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C55.29
testis, embryo E16.CNhs11033.470-26G54.28
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G54.73
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H374.17
testis, neonate N30.CNhs11130.1391-42E2131.92
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I45.68
thymus, embryo E15.CNhs11005.430-45I25.96
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G46.16
thymus, neonate N02.CNhs11181.1541-43F88.89
thymus, neonate N03.CNhs11137.2104-43C77.68
thymus, neonate N06.CNhs11197.681-26C48.78
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E48.37
thymus, neonate N20.CNhs11186.820-7A27.60
thymus, neonate N25.CNhs11125.1362-25G76.83
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A175.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A274.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A372.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D758.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A561.19
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A656.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A755.84
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A850.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A946.60
whole body, embryo E11.CNhs11014.324-5I811.83
whole body, embryo E12.CNhs10587.857-27C911.97
whole body, embryo E13.CNhs10512.372-23H213.15
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B111.95
whole body, embryo E16.CNhs10514.453-14F29.01
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.92
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.69
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.83
whole body, embryo E17.5.CNhs10513.490-9F96.75
whole body, embryo E17.CNhs10517.475-3I514.74
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C26.45
whole body, neonate N01.CNhs10576.659-23C67.46
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B48.12





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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