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FFCP PHASE1:Mm9::chr7:16872093..16872137,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:16872093..16872137,-
|short_description=p1@Ccdc9
|description=CAGE_peak_1_at_Ccdc9_5end
|association_with_transcript=0bp_to_ENSMUST00000144186,ENSMUST00000148741,ENSMUST00000150528_5end
|EntrezGene=243846
|EntrezGene=243846
|HGNC=
|HGNC=
|UniProt=D6RFU6,G3UXX6
|UniProt=D6RFU6,G3UXX6
|association_with_transcript=0bp_to_ENSMUST00000144186,ENSMUST00000148741,ENSMUST00000150528_5end
|description=CAGE_peak_1_at_Ccdc9_5end
|id=chr7:16872093..16872137,-
|ontology_enrichment_disease=
|phase1_expression=11.8510146857548,15.3549179361319,16.3799726180233,22.9872800593191,21.5385163876929,23.3352187957527,21.0251376535973,22.854828249159,41.39188431259,42.8338083169248,33.7299397404245,28.7977493973164,25.6801094896809,29.5480960176211,27.9812199925157,20.4500020063724,25.8837894907414,23.1864691538305,23.0352248457641,14.004858509335,17.6890043514225,9.53193131528499,6.79119451761232,19.0390983124154,13.3057383018959,13.2073351746455,13.3536218809313,15.7293999860699,14.4417798786844,13.3575968772763,14.1907526819395,17.14582818341,19.6820732027062,0,15.0202842270663,10.805251948302,14.2918549383658,24.6933662134776,12.5013655123808,25.1291397107423,21.1763335691165,32.7861832780054,23.7900072985265,9.81995180209503,6.9950082541465,9.36088436024576,10.1710874765245,14.6076854774899,15.378032791413,15.3599620268684,16.2384249085421,5.75010257459886,42.2812167265496,63.8318684969983,45.0365690850902,13.3774906738692,12.6074713573053,13.4074743992135,17.1968991730658,12.6957835025288,15.8457850876545,14.9091594110418,17.7858959222228,23.8473425079571,21.7550599764734,22.0248835633291,14.081205194365,15.7529505181837,17.4198548678242,16.2007125998029,21.2428210964896,15.1395021734016,12.3686382932904,19.3535462759627,21.9486128631761,18.3843757322004,23.1243350098716,28.4742763929969,30.4140935847362,15.6944682398931,20.1272815925301,17.1901412283731,26.5223849051312,16.3201156909187,20.7805616976462,12.9636577608414,15.233769845504,13.047961207771,17.4170244666323,8.69072941228034,22.8992946074325,13.7667820317022,32.638624017972,16.7307989407723,12.9955283489534,17.9210754838934,19.24088555805,10.9075406449957,15.5871602761721,10.2468476607999,14.7885590765515,19.2489716121477,43.3168907501298,42.6640021891999,16.2368280758411,19.5087096415826,18.704404465547,20.0963628305546,18.3845897389492,16.92240385339,16.3076207160168,18.2679286987285,15.2206228188999,16.1273225391306,18.8141931417128,18.2216557428029,17.7980376768749,14.1707369781513,17.6922110389975,19.5737888436365,23.6300424752621,26.183263669302,22.3670113461747,29.5708604981663,23.8769245767339,21.9693067479389,17.972268675888,17.9970819298022,19.9500256504712,19.3229924832221,26.0775343606617,20.1046963380583,28.3333641913411,27.105838477015,23.4800490352303,22.8760180925538,21.7936238639677,21.1491850037158,8.33985102831127,20.6233018768745,21.4698730888461,17.4725599369439,15.1252189036493,23.6606564002073,23.6767017046621,19.0889443224426,21.5513966487376,25.0942269616845,16.8143034487617,16.2631228944325,14.4279921814438,14.2477226077924,17.5169767012127,16.716103993064,16.0510066398196,19.5053581482123,20.3641824320838,20.5878325691772,20.7439354558783,15.1201813950916,17.5894544985822,15.8454614085693,12.7842157216014,16.9217239302767,14.5011086114136,19.9979192485351,15.5598572811779,18.2153934092784,21.5573403386659,18.0584210487005,20.5914776246474,19.0059983652932,21.2963611832319,20.8019949078576,19.3466752678997,18.9344486777883,17.1817767151575,3.96675849995316,17.7029247944244,19.5078804362768,16.2373001265838,15.7313149206207,19.7916459021935,17.1203063501303,20.8792787079585,19.1050787479853,24.3795152536261,27.0580801975965,20.0813009732694,15.2799299471218,20.1008386383466,24.0960940637784,14.035424670528,21.1359748327998,25.9227792048085,23.6235540300565,21.3347735884388,23.6357713030374,18.9709611372772,17.8608279055319,15.8568715119789,12.7099078839455,12.4510103376603,21.1893284259439,20.0490175015467,17.0895205412489,24.5460746880089,15.6765153839071,14.0044218479781,15.247895284893,21.5639851610797,16.4736847912849,20.1275489138296,16.7463426450827,16.2259590019572,16.4176270665623,13.8136008411872,15.4381926836277,29.1910040463235,12.127450353311,17.9261474086228,17.9929790921699,22.0608833391192,16.4156132292979,19.9956658344252,24.5868396300827,20.3349335896986,23.6967217924189,27.7451297464028,27.3651735575282,29.3564469172022,27.6279701890687,43.729472342389,31.0026239776664,19.6705709207614,15.452457793065,21.6743296483519,25.0833009307315,13.2787305755107,21.7124997395761,14.8288863125641,10.5418460960092,15.2950612390287,12.1874086955802,17.3782965784267,17.2676683781188,9.71545684019746,13.4437694639203,16.9973744517005,25.7057053137446,16.0392296285344,25.819512531752,21.3381916753185,16.4970122972535,22.5666735177937,14.5668381692989,17.5347663039556,16.7858520982749,15.3556984298002,15.6791925451403,19.6405502807848,17.8131527443978,16.0423820273125,23.3867200872504,17.9211634577498,23.721174947083,14.9793426531667,17.6459872150684,25.8717367565509,18.2186479776853,14.5418991586664,15.8748247665843,18.5940393280397,18.8768268451052,17.1310346886509,15.2519091021951,31.7560893199145,35.1207718765353,25.1884505645613,19.722326451507,22.6807453605959,22.4873032650734,23.0269860937582,22.6218868452822,18.7957968877638,24.147263551697,20.7417870654077,26.3715839806567,30.7562012372307,21.7339264546196,32.4658801288264,27.2905332031133,24.3231953895786,26.7307773044232,14.7096237015228,13.2157653632452,20.088993392855,19.6542998253601,19.2159056096636,15.3745354878696,20.7460173870593,22.7727669526106,24.4972299521489,19.2615187056947,10.1464728963154,21.5303826303329,21.6750622498798,13.4171319957393,16.9199368755828,12.6717094118084,16.195298933114,16.0151393358059,19.8184160964594,23.1920755992966,20.4501304443084,20.2247117202034,15.2043911467623,16.8445969750317,16.2401028722244,13.6060288707286,14.1063761894698,15.1446266395161,15.8027794076798,19.183625490148,21.109285443435,17.039625288126,19.3941182672107,19.4347920113466,21.972857610135,22.4463079779059,17.314904363177,10.3170935100897,15.9490385545875,25.5010264122491,18.580565069667,18.681465675261,15.6488916727718,24.0754609936974,27.1080884456192,17.9526842237799,30.9363577257274,26.1216837162405,22.6077231524312,33.9927253825365,24.9758325085768,25.2179873805563,24.0165476761628,25.3702552758392,19.408233998241,15.1629451892392,14.6830900948555,18.7192172142586,12.157563432423,10.8467669985508,16.4462578573195,16.4828045791115,16.0459604795908,15.4145299175916,14.9552786935241,13.9583492625696,15.6381317474704,16.646539625266,16.7137214660835,16.6702791949076,18.7732608030666,17.1689206212697,20.6042950401653,16.1918812147837,22.286501405052,19.1673870652084,22.1745656651008,17.1508771626148,15.7162665293602,17.6844530493604,17.3781574229134,18.414879800649,20.5064211907251,16.8342681497322,16.0157274467635,18.2233292394792,19.2338590289754,19.2121683070598,14.8538090455479,15.7380664100906,13.5680332898337,19.9830080264917,21.0417165275728,17.2061306913222,12.9845987947436
|phase1_expression=11.8510146857548,15.3549179361319,16.3799726180233,22.9872800593191,21.5385163876929,23.3352187957527,21.0251376535973,22.854828249159,41.39188431259,42.8338083169248,33.7299397404245,28.7977493973164,25.6801094896809,29.5480960176211,27.9812199925157,20.4500020063724,25.8837894907414,23.1864691538305,23.0352248457641,14.004858509335,17.6890043514225,9.53193131528499,6.79119451761232,19.0390983124154,13.3057383018959,13.2073351746455,13.3536218809313,15.7293999860699,14.4417798786844,13.3575968772763,14.1907526819395,17.14582818341,19.6820732027062,0,15.0202842270663,10.805251948302,14.2918549383658,24.6933662134776,12.5013655123808,25.1291397107423,21.1763335691165,32.7861832780054,23.7900072985265,9.81995180209503,6.9950082541465,9.36088436024576,10.1710874765245,14.6076854774899,15.378032791413,15.3599620268684,16.2384249085421,5.75010257459886,42.2812167265496,63.8318684969983,45.0365690850902,13.3774906738692,12.6074713573053,13.4074743992135,17.1968991730658,12.6957835025288,15.8457850876545,14.9091594110418,17.7858959222228,23.8473425079571,21.7550599764734,22.0248835633291,14.081205194365,15.7529505181837,17.4198548678242,16.2007125998029,21.2428210964896,15.1395021734016,12.3686382932904,19.3535462759627,21.9486128631761,18.3843757322004,23.1243350098716,28.4742763929969,30.4140935847362,15.6944682398931,20.1272815925301,17.1901412283731,26.5223849051312,16.3201156909187,20.7805616976462,12.9636577608414,15.233769845504,13.047961207771,17.4170244666323,8.69072941228034,22.8992946074325,13.7667820317022,32.638624017972,16.7307989407723,12.9955283489534,17.9210754838934,19.24088555805,10.9075406449957,15.5871602761721,10.2468476607999,14.7885590765515,19.2489716121477,43.3168907501298,42.6640021891999,16.2368280758411,19.5087096415826,18.704404465547,20.0963628305546,18.3845897389492,16.92240385339,16.3076207160168,18.2679286987285,15.2206228188999,16.1273225391306,18.8141931417128,18.2216557428029,17.7980376768749,14.1707369781513,17.6922110389975,19.5737888436365,23.6300424752621,26.183263669302,22.3670113461747,29.5708604981663,23.8769245767339,21.9693067479389,17.972268675888,17.9970819298022,19.9500256504712,19.3229924832221,26.0775343606617,20.1046963380583,28.3333641913411,27.105838477015,23.4800490352303,22.8760180925538,21.7936238639677,21.1491850037158,8.33985102831127,20.6233018768745,21.4698730888461,17.4725599369439,15.1252189036493,23.6606564002073,23.6767017046621,19.0889443224426,21.5513966487376,25.0942269616845,16.8143034487617,16.2631228944325,14.4279921814438,14.2477226077924,17.5169767012127,16.716103993064,16.0510066398196,19.5053581482123,20.3641824320838,20.5878325691772,20.7439354558783,15.1201813950916,17.5894544985822,15.8454614085693,12.7842157216014,16.9217239302767,14.5011086114136,19.9979192485351,15.5598572811779,18.2153934092784,21.5573403386659,18.0584210487005,20.5914776246474,19.0059983652932,21.2963611832319,20.8019949078576,19.3466752678997,18.9344486777883,17.1817767151575,3.96675849995316,17.7029247944244,19.5078804362768,16.2373001265838,15.7313149206207,19.7916459021935,17.1203063501303,20.8792787079585,19.1050787479853,24.3795152536261,27.0580801975965,20.0813009732694,15.2799299471218,20.1008386383466,24.0960940637784,14.035424670528,21.1359748327998,25.9227792048085,23.6235540300565,21.3347735884388,23.6357713030374,18.9709611372772,17.8608279055319,15.8568715119789,12.7099078839455,12.4510103376603,21.1893284259439,20.0490175015467,17.0895205412489,24.5460746880089,15.6765153839071,14.0044218479781,15.247895284893,21.5639851610797,16.4736847912849,20.1275489138296,16.7463426450827,16.2259590019572,16.4176270665623,13.8136008411872,15.4381926836277,29.1910040463235,12.127450353311,17.9261474086228,17.9929790921699,22.0608833391192,16.4156132292979,19.9956658344252,24.5868396300827,20.3349335896986,23.6967217924189,27.7451297464028,27.3651735575282,29.3564469172022,27.6279701890687,43.729472342389,31.0026239776664,19.6705709207614,15.452457793065,21.6743296483519,25.0833009307315,13.2787305755107,21.7124997395761,14.8288863125641,10.5418460960092,15.2950612390287,12.1874086955802,17.3782965784267,17.2676683781188,9.71545684019746,13.4437694639203,16.9973744517005,25.7057053137446,16.0392296285344,25.819512531752,21.3381916753185,16.4970122972535,22.5666735177937,14.5668381692989,17.5347663039556,16.7858520982749,15.3556984298002,15.6791925451403,19.6405502807848,17.8131527443978,16.0423820273125,23.3867200872504,17.9211634577498,23.721174947083,14.9793426531667,17.6459872150684,25.8717367565509,18.2186479776853,14.5418991586664,15.8748247665843,18.5940393280397,18.8768268451052,17.1310346886509,15.2519091021951,31.7560893199145,35.1207718765353,25.1884505645613,19.722326451507,22.6807453605959,22.4873032650734,23.0269860937582,22.6218868452822,18.7957968877638,24.147263551697,20.7417870654077,26.3715839806567,30.7562012372307,21.7339264546196,32.4658801288264,27.2905332031133,24.3231953895786,26.7307773044232,14.7096237015228,13.2157653632452,20.088993392855,19.6542998253601,19.2159056096636,15.3745354878696,20.7460173870593,22.7727669526106,24.4972299521489,19.2615187056947,10.1464728963154,21.5303826303329,21.6750622498798,13.4171319957393,16.9199368755828,12.6717094118084,16.195298933114,16.0151393358059,19.8184160964594,23.1920755992966,20.4501304443084,20.2247117202034,15.2043911467623,16.8445969750317,16.2401028722244,13.6060288707286,14.1063761894698,15.1446266395161,15.8027794076798,19.183625490148,21.109285443435,17.039625288126,19.3941182672107,19.4347920113466,21.972857610135,22.4463079779059,17.314904363177,10.3170935100897,15.9490385545875,25.5010264122491,18.580565069667,18.681465675261,15.6488916727718,24.0754609936974,27.1080884456192,17.9526842237799,30.9363577257274,26.1216837162405,22.6077231524312,33.9927253825365,24.9758325085768,25.2179873805563,24.0165476761628,25.3702552758392,19.408233998241,15.1629451892392,14.6830900948555,18.7192172142586,12.157563432423,10.8467669985508,16.4462578573195,16.4828045791115,16.0459604795908,15.4145299175916,14.9552786935241,13.9583492625696,15.6381317474704,16.646539625266,16.7137214660835,16.6702791949076,18.7732608030666,17.1689206212697,20.6042950401653,16.1918812147837,22.286501405052,19.1673870652084,22.1745656651008,17.1508771626148,15.7162665293602,17.6844530493604,17.3781574229134,18.414879800649,20.5064211907251,16.8342681497322,16.0157274467635,18.2233292394792,19.2338590289754,19.2121683070598,14.8538090455479,15.7380664100906,13.5680332898337,19.9830080264917,21.0417165275728,17.2061306913222,12.9845987947436
|short_description=p1@Ccdc9
}}
}}

Revision as of 22:26, 18 April 2012

Short description:p1@Ccdc9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc9_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000144186, ENSMUST00000148741, ENSMUST00000150528_5end
EntrezGene:Ccdc9
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Ccdc9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I515.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.99
CD326+ enterocyte, pool2.CNhs13197.11849-124I421.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I723.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I821.03
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E922.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E741.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F242.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E633.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A127.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.79
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.31
GP2+ M cell, pool1.CNhs13228.11845-124H913.21
GP2+ M cell, pool2.CNhs13231.11846-124I113.35
GP2+ M cell, pool3.CNhs13240.11847-124I215.73
Ileum epithelium, pool1.CNhs13199.10252-104B914.44
Ileum epithelium, pool2.CNhs13232.10253-104C113.36
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G619.68
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F515.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.81
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H325.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H232.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H423.79
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.82
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.36
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B815.38
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A242.28
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I963.83
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A145.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C113.38
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.61
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.41
Mouse Granule cells, donor1.CNhs12131.11713-123C317.20
Mouse Granule cells, donor2.CNhs12357.11731-123E312.70
Mouse Granule cells, donor3.CNhs12108.11636-122C715.85
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.91
Mouse Meningeal cells, donor3.CNhs12109.11639-122D117.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C723.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D222.02
Mouse Microglia, donor1.CNhs12629.11718-123C814.08
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.20
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.95
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D730.41
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E426.52
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.78
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.05
Mouse Schwann, donor1.CNhs12507.11728-123D917.42
Mouse Schwann, donor2.CNhs12573.11746-123F98.69
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F713.77
Mouse hepatocyte, donor1.CNhs13078.11714-123C432.64
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.92
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I710.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.79
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G116.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.70
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B620.10
accessory axillary lymph node, adult.CNhs10475.1063-29H918.38
adrenal gland, adult.CNhs10508.49-24D716.92
adrenal gland, embryo E14.CNhs11038.406-44C516.31
adrenal gland, embryo E16.CNhs11004.1254-43D618.27
adrenal gland, embryo E17.CNhs11043.1263-45I115.22
adrenal gland, embryo E18.CNhs11026.1262-18F516.13
adrenal gland, neonate N00.CNhs11191.1311-23C118.81
adrenal gland, neonate N25.CNhs11223.1377-27I318.22
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H114.17
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F519.57
bone (os femoris), neonate N16.CNhs11225.1525-43A623.63
bone (os femoris), neonate N20.CNhs11195.1350-25C326.18
cecum, adult.CNhs10467.37-13H422.37
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I223.88
colon, adult.CNhs10468.36-18H721.97
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C717.97
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.95
corpora quadrigemina, adult.CNhs10501.16-22A419.32
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F120.10
cortex, adult.CNhs10473.12-14D528.33
cortex, neonate N30.CNhs11107.1392-42F227.11
diencephalon, adult.CNhs10482.20-12F223.48
diencephalon, neonate N30.CNhs11201.1388-42B222.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.79
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A221.15
epididymis, adult.CNhs10490.58-23B28.34
eyeball, adult.CNhs10484.31-12G420.62
eyeball, embryo E12.CNhs11016.345-16C621.47
eyeball, embryo E14.CNhs10521.399-16E217.47
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D423.66
eyeball, neonate N00.CNhs11207.633-15C623.68
eyeball, neonate N01.CNhs11140.1532-43E719.09
eyeball, neonate N02.CNhs11205.1551-44G821.55
eyeball, neonate N16.CNhs11188.777-19A225.09
forelimb, embryo E11.CNhs10596.335-25E216.81
forelimb, embryo E12.CNhs10600.359-14H216.26
forelimb, embryo E13.CNhs10589.384-1E214.43
forelimb, embryo E14.CNhs10577.413-26A814.25
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C416.72
forelimb, embryo E18.CNhs11008.1520-43B516.05
gonad, embryo E13.CNhs11044.1564-45I619.51
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C820.36
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D220.59
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.74
heart, embryo E11.CNhs10586.331-24E915.12
heart, embryo E12.CNhs11015.353-12F517.59
heart, embryo E13.CNhs11013.376-3I915.85
heart, embryo E14.CNhs10597.403-26D412.78
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C614.50
heart, embryo E17.CNhs11025.479-18E520.00
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E318.22
heart, neonate N03.CNhs11221.1349-25I221.56
heart, neonate N10.CNhs11118.749-24G118.06
heart, neonate N16.CNhs11209.782-15G120.59
heart, neonate N20.CNhs11127.821-26I619.01
heart, neonate N25.CNhs11196.1351-25D321.30
heart, neonate N30.CNhs11202.1390-42D220.80
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G118.93
intestinal mucosa, adult.CNhs10506.860-29I317.18
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I517.70
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D816.24
intestine, embryo E16.CNhs10585.463-22H415.73
intestine, embryo E17.CNhs10582.482-18D319.79
intestine, embryo E18.CNhs10526.1289-20F717.12
intestine, neonate N00.CNhs11126.644-26D120.88
intestine, neonate N01.CNhs11192.1322-23E919.11
intestine, neonate N06.CNhs11102.688-20B824.38
intestine, neonate N07.CNhs11095.720-20F227.06
intestine, neonate N10.CNhs11098.755-23A520.08
intestine, neonate N20.CNhs11187.827-18D115.28
intestine, neonate N25.CNhs11121.1352-25E320.10
intestine, neonate N30.CNhs11131.1384-42G124.10
kidney, embryo E14.CNhs10606.411-4I914.04
kidney, embryo E15.CNhs10997.434-16F821.14
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I223.62
kidney, embryo E18.CNhs11001.1288-20C721.33
kidney, neonate N00.CNhs11214.646-21G723.64
kidney, neonate N10.CNhs11206.758-6D518.97
kidney, neonate N20.CNhs11113.832-19I117.86
kidney, neonate N25.CNhs11122.1353-25F315.86
kidney, neonate N30.CNhs11203.1385-42H112.71
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F821.19
liver, embryo E13.CNhs10524.378-3H620.05
liver, embryo E14.CNhs10594.409-16E117.09
liver, embryo E15.CNhs10520.433-16D724.55
liver, embryo E16.CNhs10523.462-17F515.68
liver, embryo E17.CNhs10510.481-18A314.00
liver, embryo E18.CNhs10579.499-43G415.25
liver, neonate N00.CNhs11117.641-24F421.56
liver, neonate N03.CNhs11123.1345-25G216.47
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H216.75
liver, neonate N10.CNhs11115.751-24B916.23
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H113.81
liver, neonate N30.CNhs11106.1382-42D115.44
lung, adult.CNhs10474.28-22B129.19
lung, embryo E12.CNhs10522.354-16G212.13
lung, embryo E14.CNhs10604.404-26F817.93
lung, embryo E15.CNhs11020.432-17C517.99
lung, embryo E16.CNhs10998.458-17B622.06
lung, embryo E17.CNhs10605.480-44A616.42
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C624.59
lung, neonate N06.CNhs11212.683-20E520.33
lung, neonate N07.CNhs11111.715-19A323.70
lung, neonate N10.CNhs11219.750-23E627.75
lung, neonate N20.CNhs11109.822-18A427.37
lung, neonate N25.CNhs11119.1359-25C729.36
lung, neonate N30.CNhs11133.1394-42H227.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A143.73
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A131.00
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H215.45
medulla oblongata, adult.CNhs10477.17-12C221.67
medulla oblongata, neonate N30.CNhs11200.1396-42A325.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C221.71
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E315.30
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D817.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D917.27
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D49.72
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D513.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.00
olfactory brain, adult.CNhs10489.18-22I925.71
ovary, adult.CNhs10507.91-2I716.04
ovary, embryo E18.CNhs11040.505-44H725.82
ovary, neonate N00.CNhs11217.1299-22I421.34
oviduct, adult pregnant day01.CNhs10500.988-6G616.50
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F414.57
pancreas, embryo E15.CNhs11042.1556-45F217.53
pancreas, embryo E16.CNhs11003.460-26E516.79
pancreas, embryo E17.CNhs10599.1558-45G315.36
pancreas, embryo E18.CNhs10580.1535-43I715.68
pancreas, neonate N00.CNhs11105.645-26G919.64
pancreas, neonate N01.CNhs11138.1531-43D717.81
pancreas, neonate N02.CNhs11139.1539-43D816.04
pancreas, neonate N16.CNhs11136.787-43B623.39
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H523.72
pituitary gland, adult.CNhs10493.21-1G814.98
pituitary gland, embryo E12.CNhs11018.346-16E617.65
pituitary gland, embryo E13.CNhs11009.370-44C725.87
pituitary gland, embryo E14.CNhs11037.398-44A518.22
pituitary gland, embryo E15.CNhs10592.427-16B914.54
pituitary gland, embryo E16.CNhs11036.449-43F615.87
pituitary gland, embryo E17.CNhs11039.1265-44F518.59
pituitary gland, neonate N00.CNhs11190.1308-22E918.88
placenta, adult pregnant day10.CNhs10472.539-13I717.13
placenta, adult pregnant day17.CNhs10464.577-18G315.25
prostate, adult.CNhs10470.859-1F831.76
skin, adult.CNhs10492.30-1C335.12
skin, neonate N00.CNhs11124.650-25G425.19
skin, neonate N03.CNhs11215.662-22H319.72
skin, neonate N06.CNhs11097.693-20I522.68
skin, neonate N10.CNhs11108.762-6C422.49
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C922.62
spleen, adult.CNhs10465.25-2G218.80
spleen, embryo E16.CNhs11035.461-43C124.15
spleen, embryo E18.CNhs11011.1271-21F220.74
spleen, neonate N10.CNhs11116.752-24D126.37
spleen, neonate N20.CNhs11112.824-19H130.76
spleen, neonate N25.CNhs11099.1354-25G321.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C632.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C927.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D324.32
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E314.71
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D420.09
stomach, embryo E17.CNhs11006.1035-18D519.65
stomach, embryo E18.CNhs10999.1286-20C619.22
stomach, neonate N03.CNhs11193.1340-24B815.37
stomach, neonate N07.CNhs11210.718-18A920.75
stomach, neonate N25.CNhs11104.1355-25E422.77
stomach, neonate N30.CNhs11134.1386-42I124.50
submandibular gland, adult.CNhs10469.59-29C119.26
testis, adult.CNhs10504.57-7G510.15
testis, embryo E13.CNhs11031.389-23F521.53
testis, embryo E15.CNhs11034.443-27C521.68
testis, embryo E16.CNhs11033.470-26G513.42
testis, embryo E17.CNhs11029.486-18I516.92
testis, embryo E18.CNhs11027.503-18G512.67
testis, neonate N00.CNhs11189.1300-22B716.20
testis, neonate N07.CNhs11222.726-26I416.02
testis, neonate N10.CNhs11204.763-44D919.82
testis, neonate N20.CNhs11110.839-18H323.19
testis, neonate N30.CNhs11130.1391-42E220.45
thymus, adult.CNhs10471.38-12B520.22
thymus, embryo E14.CNhs11041.402-44I415.20
thymus, embryo E15.CNhs11005.430-45I216.84
thymus, embryo E16.CNhs11002.456-26C516.24
thymus, embryo E17.CNhs10581.478-18C113.61
thymus, embryo E18.CNhs10595.1273-19G414.11
thymus, neonate N02.CNhs11181.1541-43F815.14
thymus, neonate N03.CNhs11137.2104-43C715.80
thymus, neonate N06.CNhs11197.681-26C419.18
thymus, neonate N07.CNhs11211.713-19D321.11
thymus, neonate N10.CNhs11194.748-24E417.04
thymus, neonate N20.CNhs11186.820-7A219.39
thymus, neonate N25.CNhs11125.1362-25G719.43
thymus, neonate N30.CNhs11132.1393-42G221.97
tongue, adult.CNhs10499.32-1B422.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F710.32
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.95
urinary bladder, adult.CNhs10481.879-12E425.50
uterus, adult pregnant day19.CNhs10497.590-15F518.58
uterus, adult.CNhs10509.92-27E518.68
vagina, adult.CNhs10502.89-27D515.65
vesicular gland, adult.CNhs10491.51-27F824.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.94
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.12
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A422.61
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.99
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A624.98
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A725.22
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A824.02
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I819.41
whole body, embryo E12.CNhs10587.857-27C915.16
whole body, embryo E13.CNhs10512.372-23H214.68
whole body, embryo E14.5.CNhs10578.420-27D218.72
whole body, embryo E14.CNhs10519.395-14B112.16
whole body, embryo E16.CNhs10514.453-14F210.85
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.05
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.96
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.64
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.65
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.71
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.77
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G519.17
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G520.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.22
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.21
whole body, embryo E17.5.CNhs10513.490-9F914.85
whole body, embryo E17.CNhs10517.475-3I515.74
whole body, embryo E18.CNhs10516.493-3B313.57
whole body, neonate N00.CNhs10525.657-19C219.98
whole body, neonate N01.CNhs10576.659-23C621.04
whole body, neonate N06.CNhs10515.692-21D117.21
whole body, neonate N10.CNhs10518.761-6B412.98





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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