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FFCP PHASE1:Mm9::chr7:148380047..148380090,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:148380047..148380090,+
|short_description=p1@Lrrc56
|description=CAGE_peak_1_at_Lrrc56_5end
|association_with_transcript=0bp_to_ENSMUST00000070458,ENSMUST00000084446,ENSMUST00000144199_5end
|EntrezGene=70552
|EntrezGene=70552
|HGNC=
|HGNC=
|UniProt=Q8K375,Q8BMW2
|UniProt=Q8K375,Q8BMW2
|association_with_transcript=0bp_to_ENSMUST00000070458,ENSMUST00000084446,ENSMUST00000144199_5end
|description=CAGE_peak_1_at_Lrrc56_5end
|id=chr7:148380047..148380090,+
|ontology_enrichment_disease=
|phase1_expression=2.40223270657191,6.97950815278722,5.0049916332849,13.6108895088074,8.5152274090879,5.70789524500425,5.60670337429262,4.77756296733832,1.68946466582,1.87251621057595,0.68487187290202,0.319088635981346,3.76641605848653,4.28359971853087,2.99798785634096,2.22722794128809,1.39912375625629,2.99689057090326,3.15363197293199,4.2438965179803,12.8415368128115,4.0709289992363,4.17919662622297,8.63959083084396,6.8822784320151,6.31655160526522,2.58457197695445,6.24866574789078,4.75058548640935,4.28451220591882,2.88249663851896,6.98533740805594,5.53558308826113,0,5.77703239502549,1.99481574430191,5.9209113316087,7.53356935326434,5.4693474116666,5.23523743973798,4.1176204162171,4.78131839470912,3.88408282424923,1.76255545165808,1.21652317463417,1.83546752161682,3.9119567217402,1.09012578190223,6.15121311656521,3.30530828426282,2.2397827460058,1.43752564364972,2.01339127269284,3.62681071005672,6.04968838456435,2.31533492432352,3.43840127926508,4.64104883049698,1.21389876515759,1.5869729378161,0.633831403506179,2.37191172448392,1.77858959222228,2.6996991518442,0.988866362566974,0.7104801149461,1.19840044207362,3.45796474789399,0.725827286159344,0.810035629990144,0.630974884054146,3.14216082844184,1.76694832761291,1.95985278743926,0.958454710182364,1.83843757322004,0,0.766124028511126,1.22885226604995,1.84640802822271,1.46380229763855,0.52091337055676,1.3959149950069,2.25105044012672,1.06958773443767,1.76777151284201,1.42371680799103,2.05039390407831,1.66597625333005,2.19157524309678,8.98579914975201,0,1.3599426674155,3.77792234146472,3.24888208723835,5.37632264516803,4.35377702408431,3.06774580640504,2.07828803682295,1.7666978725517,3.09855523508697,3.84979432242953,0,0,1.5154372870785,2.02687892380079,1.01104889002957,5.709193985953,2.07150306917737,3.56261133755579,1.21439728736295,5.1759131313064,4.61230994512117,3.61734337326294,4.35078216402108,4.27266410520897,2.96633961281249,3.7595832799177,2.65383165584962,3.23533699894818,3.3126227769059,3.87900202508178,7.45567044872489,0.585561594023094,1.04723353406728,6.38642638021478,1.7972268675888,2.99951365496704,2.1601938602421,1.04853447583376,0.457500602818626,1.00523481690292,1.91206752211504,1.79000820131231,1.66230435647648,1.46017136760982,2.44414473240759,4.85187185379363,10.867078612648,2.31486041475121,1.30120442962704,1.60931473103431,1.98068342785884,2.86339153887859,2.85753296435577,2.43416068541215,2.52994656311268,2.58703370739016,2.15567992932842,1.89106080167819,2.28736461413134,2.41115305670332,3.61461423993277,2.78601733217733,4.7329891373827,1.99034266818493,2.1066395619397,2.31613116403244,1.70498099637356,1.24275463521301,1.40715635988658,2.34080679899319,1.42046841351126,1.77087808572663,4.16521204795921,2.09280550275367,1.60964040839772,1.63471479314037,0.822799249567402,3.2833492815819,2.10778904819225,1.02339991197733,2.63460138349261,3.08674763148855,1.26173969138476,1.85228302282712,11.2342386214491,7.40461586657924,1.2797295032114,1.39342003116263,2.70621668776396,4.63872106633688,3.7804267453628,3.99473814836374,5.69434873853414,3.45867804920423,4.02136334080431,5.17286827306992,5.65395852645448,8.98819408654222,5.61958929674205,7.56736838366595,2.46568271239006,2.05647322697512,2.25415471346161,2.44381593414377,2.52138233317913,2.38461787627083,3.85742876457969,3.98547399544926,3.767969468193,4.44229790118482,2.66807364378434,4.00428253718626,4.12773889737726,3.14806957338795,5.07150303471257,5.06472035480075,2.29163266603278,1.43848068725405,2.2698931748505,2.74561413188081,0,4.09355042435354,2.49630138491648,0.505157755894224,2.33216637578486,5.30687873499704,1.84753190166605,0.947457058852424,1.14075483509418,2.20668611507745,3.28566347603903,3.01511263395268,4.52282917683426,3.70753930929818,2.99506773801763,3.32197034473162,2.87018583583477,2.29408640602033,2.24490476425664,3.90552458170081,4.52373851817817,1.63171705145613,3.93411418415229,4.96686143348518,2.24770825982909,1.75817529888305,0.491804836130026,1.51482556322624,1.57754109708128,1.17131623288992,1.29254038639679,1.19484398976276,2.22798674082394,1.98153571552183,0.809621403349789,2.92255857911312,2.37172666767914,0.321321316421807,2.83880170416537,2.49291845134157,1.95464351224291,3.13443233647817,1.32745138339963,3.39892890616974,3.32555912661226,1.50884063804718,4.13422650033082,4.61152721915891,6.20227903603731,5.45300594216258,3.20847640546249,1.58018378967908,5.27093042874994,2.06271086496374,7.48967132658334,1.8006109403131,3.62204314591713,2.14337035031592,4.43350584105684,2.85390108163313,4.11372551505302,5.78483403317739,4.4587624532105,2.96564899209348,5.95426674748397,1.97863503529776,2.42196640043858,2.95533332147964,2.26807453605959,4.10352249362653,5.53813589596716,2.03967832211561,3.75915937755276,2.06386867963222,2.96311243791539,7.34636982318295,5.05768642567793,4.34678529092393,1.18984900995699,1.81936888020755,1.10559979043539,2.86401185404534,2.05618395827738,2.23651413839534,2.70013352054503,2.92723614420256,3.71216358368502,3.64133735239016,3.88471241909079,4.18809507174447,4.79575401179634,4.97071450469541,74.9711608449973,2.0932316446157,1.32366792365678,1.16670713006429,1.93739735216597,0.844780627453891,2.11243029562357,2.3436789271911,3.14578033277133,33.8217769156408,40.612230882359,3.79213344753814,3.04087822935246,3.08132871494482,2.46849563657811,2.8644271306797,3.77494574084403,2.64429988943931,2.51072196196781,2.92802704849628,2.97206545954499,2.11734988787365,2.24153125701431,3.94468550725351,4.79195298944433,3.85441652145859,1.33191572024439,0.807424709485281,1.00730769818447,3.09103350451505,3.75364950902364,3.29672923681077,2.35805216986972,5.517293144389,1.6942555278512,1.38097570952153,2.29158205375759,1.3748254587495,1.37016503954128,2.2661816921691,1.35004500046361,0.900642406448441,0.453142408984205,0.51776031175182,1.55681021376265,2.79317411380722,2.39027048055788,3.64660075602441,3.77303692730368,2.02227859295016,4.22268782823069,2.88449080134452,5.45562656306086,2.02157769411038,3.54871019846336,2.82939512079114,3.46473577638565,2.11283002936069,1.89537047553524,2.85776214769844,1.15884325944855,1.73618298417335,2.88460130562315,3.67997300335993,3.42869252385415,3.01708870470874,1.66905332963125,2.76158191601424,2.1645157495526,2.03075058940024,2.74391959309159,1.31534855718921,2.58027816307137,2.24456908663095,2.01679530811096,2.65962102414021,2.45538625901814,2.63392630016142,2.89359916471712,3.49734809113124,1.63752125911786,1.93383948643468,3.06061331310149,2.8676884485537,2.55054619182464
|phase1_expression=2.40223270657191,6.97950815278722,5.0049916332849,13.6108895088074,8.5152274090879,5.70789524500425,5.60670337429262,4.77756296733832,1.68946466582,1.87251621057595,0.68487187290202,0.319088635981346,3.76641605848653,4.28359971853087,2.99798785634096,2.22722794128809,1.39912375625629,2.99689057090326,3.15363197293199,4.2438965179803,12.8415368128115,4.0709289992363,4.17919662622297,8.63959083084396,6.8822784320151,6.31655160526522,2.58457197695445,6.24866574789078,4.75058548640935,4.28451220591882,2.88249663851896,6.98533740805594,5.53558308826113,0,5.77703239502549,1.99481574430191,5.9209113316087,7.53356935326434,5.4693474116666,5.23523743973798,4.1176204162171,4.78131839470912,3.88408282424923,1.76255545165808,1.21652317463417,1.83546752161682,3.9119567217402,1.09012578190223,6.15121311656521,3.30530828426282,2.2397827460058,1.43752564364972,2.01339127269284,3.62681071005672,6.04968838456435,2.31533492432352,3.43840127926508,4.64104883049698,1.21389876515759,1.5869729378161,0.633831403506179,2.37191172448392,1.77858959222228,2.6996991518442,0.988866362566974,0.7104801149461,1.19840044207362,3.45796474789399,0.725827286159344,0.810035629990144,0.630974884054146,3.14216082844184,1.76694832761291,1.95985278743926,0.958454710182364,1.83843757322004,0,0.766124028511126,1.22885226604995,1.84640802822271,1.46380229763855,0.52091337055676,1.3959149950069,2.25105044012672,1.06958773443767,1.76777151284201,1.42371680799103,2.05039390407831,1.66597625333005,2.19157524309678,8.98579914975201,0,1.3599426674155,3.77792234146472,3.24888208723835,5.37632264516803,4.35377702408431,3.06774580640504,2.07828803682295,1.7666978725517,3.09855523508697,3.84979432242953,0,0,1.5154372870785,2.02687892380079,1.01104889002957,5.709193985953,2.07150306917737,3.56261133755579,1.21439728736295,5.1759131313064,4.61230994512117,3.61734337326294,4.35078216402108,4.27266410520897,2.96633961281249,3.7595832799177,2.65383165584962,3.23533699894818,3.3126227769059,3.87900202508178,7.45567044872489,0.585561594023094,1.04723353406728,6.38642638021478,1.7972268675888,2.99951365496704,2.1601938602421,1.04853447583376,0.457500602818626,1.00523481690292,1.91206752211504,1.79000820131231,1.66230435647648,1.46017136760982,2.44414473240759,4.85187185379363,10.867078612648,2.31486041475121,1.30120442962704,1.60931473103431,1.98068342785884,2.86339153887859,2.85753296435577,2.43416068541215,2.52994656311268,2.58703370739016,2.15567992932842,1.89106080167819,2.28736461413134,2.41115305670332,3.61461423993277,2.78601733217733,4.7329891373827,1.99034266818493,2.1066395619397,2.31613116403244,1.70498099637356,1.24275463521301,1.40715635988658,2.34080679899319,1.42046841351126,1.77087808572663,4.16521204795921,2.09280550275367,1.60964040839772,1.63471479314037,0.822799249567402,3.2833492815819,2.10778904819225,1.02339991197733,2.63460138349261,3.08674763148855,1.26173969138476,1.85228302282712,11.2342386214491,7.40461586657924,1.2797295032114,1.39342003116263,2.70621668776396,4.63872106633688,3.7804267453628,3.99473814836374,5.69434873853414,3.45867804920423,4.02136334080431,5.17286827306992,5.65395852645448,8.98819408654222,5.61958929674205,7.56736838366595,2.46568271239006,2.05647322697512,2.25415471346161,2.44381593414377,2.52138233317913,2.38461787627083,3.85742876457969,3.98547399544926,3.767969468193,4.44229790118482,2.66807364378434,4.00428253718626,4.12773889737726,3.14806957338795,5.07150303471257,5.06472035480075,2.29163266603278,1.43848068725405,2.2698931748505,2.74561413188081,0,4.09355042435354,2.49630138491648,0.505157755894224,2.33216637578486,5.30687873499704,1.84753190166605,0.947457058852424,1.14075483509418,2.20668611507745,3.28566347603903,3.01511263395268,4.52282917683426,3.70753930929818,2.99506773801763,3.32197034473162,2.87018583583477,2.29408640602033,2.24490476425664,3.90552458170081,4.52373851817817,1.63171705145613,3.93411418415229,4.96686143348518,2.24770825982909,1.75817529888305,0.491804836130026,1.51482556322624,1.57754109708128,1.17131623288992,1.29254038639679,1.19484398976276,2.22798674082394,1.98153571552183,0.809621403349789,2.92255857911312,2.37172666767914,0.321321316421807,2.83880170416537,2.49291845134157,1.95464351224291,3.13443233647817,1.32745138339963,3.39892890616974,3.32555912661226,1.50884063804718,4.13422650033082,4.61152721915891,6.20227903603731,5.45300594216258,3.20847640546249,1.58018378967908,5.27093042874994,2.06271086496374,7.48967132658334,1.8006109403131,3.62204314591713,2.14337035031592,4.43350584105684,2.85390108163313,4.11372551505302,5.78483403317739,4.4587624532105,2.96564899209348,5.95426674748397,1.97863503529776,2.42196640043858,2.95533332147964,2.26807453605959,4.10352249362653,5.53813589596716,2.03967832211561,3.75915937755276,2.06386867963222,2.96311243791539,7.34636982318295,5.05768642567793,4.34678529092393,1.18984900995699,1.81936888020755,1.10559979043539,2.86401185404534,2.05618395827738,2.23651413839534,2.70013352054503,2.92723614420256,3.71216358368502,3.64133735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|short_description=p1@Lrrc56
}}
}}

Revision as of 22:10, 18 April 2012

Short description:p1@Lrrc56
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrc56_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000070458, ENSMUST00000084446, ENSMUST00000144199_5end
EntrezGene:Lrrc56
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrrc56

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.28
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.23
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A312.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.07
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.18
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.88
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B94.75
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.78
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.92
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G87.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.78
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.31
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.05
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F92.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B65.71
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D73.56
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D65.18
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C14.35
adrenal gland, neonate N25.CNhs11223.1377-27I34.27
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A63.31
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.80
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.16
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.85
epididymis, adult.CNhs10490.58-23B210.87
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.43
eyeball, neonate N02.CNhs11205.1551-44G82.53
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I92.34
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C64.17
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G13.28
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D23.09
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I311.23
intestine, adult.CNhs10496.178-9A37.40
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F73.99
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E93.46
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E35.62
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G72.38
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H14.44
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D75.07
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A32.29
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G22.75
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B92.50
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B11.85
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A63.02
lung, embryo E18.CNhs10583.1287-20I64.52
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.63
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I72.84
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G34.13
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F54.11
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I74.46
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G42.42
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I52.27
skin, neonate N10.CNhs11108.762-6C44.10
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F22.96
spleen, neonate N10.CNhs11116.752-24D17.35
spleen, neonate N20.CNhs11112.824-19H15.06
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.11
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D52.93
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.80
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G574.97
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.15
testis, neonate N20.CNhs11110.839-18H333.82
testis, neonate N30.CNhs11130.1391-42E240.61
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.08
thymus, embryo E16.CNhs11002.456-26C52.47
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D32.97
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G24.79
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.01
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.56
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D23.65
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.16
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C63.06
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B42.55





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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