Personal tools

FFCP PHASE1:Mm9::chr5:35292084..35292153,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:35292084..35292153,+
|short_description=p1@Rgs12
|description=CAGE_peak_1_at_Rgs12_5end
|association_with_transcript=0bp_to_ENSMUST00000030984,ENSMUST00000128161,NM_173402,uc008xdf.2,uc008xdg.2_5end
|EntrezGene=71729
|EntrezGene=71729
|HGNC=
|HGNC=
|UniProt=Q8CGE9,Q3TTW9,Q8BPL6,Q9D677
|UniProt=Q8CGE9,Q3TTW9,Q8BPL6,Q9D677
|association_with_transcript=0bp_to_ENSMUST00000030984,ENSMUST00000128161,NM_173402,uc008xdf.2,uc008xdg.2_5end
|description=CAGE_peak_1_at_Rgs12_5end
|id=chr5:35292084..35292153,+
|ontology_enrichment_disease=
|phase1_expression=24.9832201483479,0.348975407639361,0,0.30246421130683,0.500895729946347,3.02182689441402,3.27057696833736,0.516493293766305,0.140788722151667,0,0,0.159544317990673,0.171200729931206,0.437102012094987,12.3250611871795,17.6153482629149,30.7807226376385,1.10411757875383,2.19383093769182,2.12194825899015,11.5658874605455,6.35462087685666,6.00759515019551,2.23989391910769,1.83527424853736,2.29692785646008,0.430761996159075,1.29282739611533,0.760093677825496,1.00812051903972,0.665191531965914,5.08024538767705,8.61090702618398,0,6.93243887403059,5.65197794218874,5.3084032628216,2.09265815368454,0.7813353445238,0,1.17646297606203,1.36609096991689,0.485510353031154,11.0789199818508,9.0225468785368,10.2786181210542,10.1710874765245,20.7123898561424,18.4536393496956,17.4986909166855,12.1788186814065,11.5002051491977,0.335565212115473,0,0,5.40244815675489,4.87106847895886,3.6097046459421,22.0524942336962,19.0436752537932,21.5502677192101,9.4876468979357,2.66788438833342,0.899899717281399,2.96659908770092,1.4209602298922,12.583204641773,22.6688800139717,26.1297823017364,23.6260392080459,25.2389953621658,8.56952953211411,10.1599528837742,25.4780862367104,38.0506519942398,32.1726575313507,7.70811166995721,3.70293280447044,5.9906547969935,25.3221672441972,28.9100953783615,26.045668527838,5.862842979029,3.93933827022176,4.88954392885792,9.72274332063103,12.8134512719193,17.1487490159277,2.95332153999418,6.8014404096107,9.56552812715537,1.72084775396277,0,1.07940638327563,0.649776417447669,2.24013443548668,3.37066608316204,6.13549161281008,7.01422212427746,4.94675404314476,14.084341977668,5.13305909657271,0,0,3.68034769719064,3.54703811665138,3.0331466700887,2.8545969929765,1.8125651855302,4.30482203287992,17.0015620230813,9.74289530598852,11.992005857315,7.53613202763113,13.4051126134703,11.1843266283411,2.71914464507811,2.31358971071859,7.96149496754887,13.5884153955824,12.5879665522424,11.1521308221101,1.86391761218122,4.39171195517321,3.14170060220183,3.83185582812887,7.42853771936706,6.59893004092748,5.71816021828791,5.99162557619291,6.40500843946077,18.3455354084782,7.12679712788333,7.41574826257959,7.48036960414416,6.16516799657479,16.7016556714519,11.3210343255185,1.51633655060205,2.94618598241064,20.0385482162564,14.0240283704418,18.0062129805349,19.2902166829715,24.3570666961754,21.7793324484245,23.144325966253,4.65666067330228,28.2394070742023,23.8273661011452,20.762232651346,19.070028721199,15.0145514581823,9.75106066262066,12.3469281844766,20.3014952154863,4.21327912387941,4.37491442095016,3.40996199274711,18.2270679831242,16.4168241986767,14.7650890398032,18.2293446400612,16.9217239302767,17.2779166433864,15.3472403535269,23.8763327245661,21.0177616260905,25.342216886676,16.4167464079095,18.564757386001,16.3743985916372,12.953456802172,16.5073895075257,6.51898840548794,13.6863134464448,0.991256348951394,2.64450566663544,16.6364835417482,19.5078804362768,9.92279452180119,7.66397393568702,8.2279876222602,5.1360919050391,3.32170343081158,4.11747386810027,10.0534083520108,6.16765063327568,6.04388670069272,2.69645822596266,2.16138049874694,3.38540164532424,11.0007382552787,14.1668155636064,19.1603150644237,13.0336849821001,11.8311017172252,15.4298803758701,12.9002535733485,4.13308414342886,3.92496819603437,7.03363834354263,1.1858105083486,12.346537822991,7.66580080941492,8.99448449539415,8.72298521970563,8.68237775108701,7.89340140522401,8.63088412352432,7.29608520487659,6.58947391651396,2.87536413054709,7.44281895337007,6.24075346229121,2.77836765741823,2.15276896226295,3.37710464954357,26.9739657643243,16.2962614122617,20.3706220552532,14.5980773766662,16.6630076284836,17.9231695462743,25.9467568565755,28.4895125872386,29.4777719478577,33.2197034473162,40.8204207763167,31.297893110706,26.0754322617502,26.6154267789981,0,0.54390568381871,5.4094070032094,2.75936746304733,5.9403718295483,5.86058432961016,8.19674726883377,6.81671503451807,10.4117712407365,13.6653560503823,18.7418356027535,15.7719406648684,11.1399337041197,11.3230612315533,16.5972387686707,12.2747460322751,13.0444966722353,3.53453448063988,13.3423680095772,25.6414469280848,22.8041743095006,14.5173708215831,0,13.8384962608339,10.883648050731,5.28094223316515,7.97315110778086,7.99331384654211,11.1124166062335,10.5424781548477,12.4774082434652,5.05658812697306,7.37930260024991,6.18813259489121,6.80879211507576,20.3469036255381,23.1552043971131,17.1469628025274,11.3497749531055,15.3397183137781,13.3284706687718,12.178597964584,2.58138878870081,3.81297727554876,1.10264199027481,4.28704257647848,15.5005849628069,9.95163261314572,8.23669173621642,6.23735419031233,3.78925087618806,4.82105785227325,12.6444451790411,13.4151464176095,10.926477114813,18.8368457004691,18.8638034255015,16.2432502976631,8.66889992968662,9.79660166265606,9.53579819250524,4.77335309007557,22.1435195506795,14.2323626988794,11.1245501046455,8.78170843260769,7.20596460362386,10.519419018016,13.4725132832298,9.16145796944104,4.40690909192096,1.24267862617385,9.01908701894705,18.8390848015413,16.2149320647956,22.3618866595655,19.2448136981819,19.4299544314395,21.5937319108187,18.6192270326849,18.0358072412223,16.4277202161684,9.50499020650956,12.0084225838708,15.4071163620525,11.4009162452958,8.70469513951227,16.2914293057408,13.3116507703447,15.9859947861559,11.9628517011408,10.0966449948148,12.574123098075,11.5950112907367,11.9873193309895,11.1605736302782,11.5708133159753,4.53460767230423,3.99574716073316,2.69141569828427,2.01461539636894,8.50034213741638,4.69206188627955,8.97442958909599,5.57357785605571,0.501572104035363,2.82375921308533,5.06357760157895,4.58316410751517,3.43706364687375,2.74033007908257,2.2661816921691,2.70009000092722,3.60256962579376,4.53142408984205,3.62432218226274,19.408233998241,23.5424675306608,19.2928974502172,14.5864030240976,11.738337107167,9.74370594785075,12.2235700290888,10.7138229764225,13.1576875932644,9.09709962349671,11.660047794951,9.61994341068989,10.8624148665064,13.8294329194518,12.0040130117232,16.1939855036245,13.9061191133827,12.3461901096771,13.1867488257058,13.2479028120958,9.25746981440622,12.0683548188349,11.4449371174714,11.482366913954,11.8577819323317,13.0306496153182,11.5244622909847,13.41655528333,13.716215498432,13.4674145197857,14.2362021749009,13.2981051207011,13.0953933814301,12.8597578184352,10.8027702149439,17.4867404556562,12.1644436391612,12.8922632428979,11.4772999241306,13.0148937280514,9.04284558919644
|phase1_expression=24.9832201483479,0.348975407639361,0,0.30246421130683,0.500895729946347,3.02182689441402,3.27057696833736,0.516493293766305,0.140788722151667,0,0,0.159544317990673,0.171200729931206,0.437102012094987,12.3250611871795,17.6153482629149,30.7807226376385,1.10411757875383,2.19383093769182,2.12194825899015,11.5658874605455,6.35462087685666,6.00759515019551,2.23989391910769,1.83527424853736,2.29692785646008,0.430761996159075,1.29282739611533,0.760093677825496,1.00812051903972,0.665191531965914,5.08024538767705,8.61090702618398,0,6.93243887403059,5.65197794218874,5.3084032628216,2.09265815368454,0.7813353445238,0,1.17646297606203,1.36609096991689,0.485510353031154,11.0789199818508,9.0225468785368,10.2786181210542,10.1710874765245,20.7123898561424,18.4536393496956,17.4986909166855,12.1788186814065,11.5002051491977,0.335565212115473,0,0,5.40244815675489,4.87106847895886,3.6097046459421,22.0524942336962,19.0436752537932,21.5502677192101,9.4876468979357,2.66788438833342,0.899899717281399,2.96659908770092,1.4209602298922,12.583204641773,22.6688800139717,26.1297823017364,23.6260392080459,25.2389953621658,8.56952953211411,10.1599528837742,25.4780862367104,38.0506519942398,32.1726575313507,7.70811166995721,3.70293280447044,5.9906547969935,25.3221672441972,28.9100953783615,26.045668527838,5.862842979029,3.93933827022176,4.88954392885792,9.72274332063103,12.8134512719193,17.1487490159277,2.95332153999418,6.8014404096107,9.56552812715537,1.72084775396277,0,1.07940638327563,0.649776417447669,2.24013443548668,3.37066608316204,6.13549161281008,7.01422212427746,4.94675404314476,14.084341977668,5.13305909657271,0,0,3.68034769719064,3.54703811665138,3.0331466700887,2.8545969929765,1.8125651855302,4.30482203287992,17.0015620230813,9.74289530598852,11.992005857315,7.53613202763113,13.4051126134703,11.1843266283411,2.71914464507811,2.31358971071859,7.96149496754887,13.5884153955824,12.5879665522424,11.1521308221101,1.86391761218122,4.39171195517321,3.14170060220183,3.83185582812887,7.42853771936706,6.59893004092748,5.71816021828791,5.99162557619291,6.40500843946077,18.3455354084782,7.12679712788333,7.41574826257959,7.48036960414416,6.16516799657479,16.7016556714519,11.3210343255185,1.51633655060205,2.94618598241064,20.0385482162564,14.0240283704418,18.0062129805349,19.2902166829715,24.3570666961754,21.7793324484245,23.144325966253,4.65666067330228,28.2394070742023,23.8273661011452,20.762232651346,19.070028721199,15.0145514581823,9.75106066262066,12.3469281844766,20.3014952154863,4.21327912387941,4.37491442095016,3.40996199274711,18.2270679831242,16.4168241986767,14.7650890398032,18.2293446400612,16.9217239302767,17.2779166433864,15.3472403535269,23.8763327245661,21.0177616260905,25.342216886676,16.4167464079095,18.564757386001,16.3743985916372,12.953456802172,16.5073895075257,6.51898840548794,13.6863134464448,0.991256348951394,2.64450566663544,16.6364835417482,19.5078804362768,9.92279452180119,7.66397393568702,8.2279876222602,5.1360919050391,3.32170343081158,4.11747386810027,10.0534083520108,6.16765063327568,6.04388670069272,2.69645822596266,2.16138049874694,3.38540164532424,11.0007382552787,14.1668155636064,19.1603150644237,13.0336849821001,11.8311017172252,15.4298803758701,12.9002535733485,4.13308414342886,3.92496819603437,7.03363834354263,1.1858105083486,12.346537822991,7.66580080941492,8.99448449539415,8.72298521970563,8.68237775108701,7.89340140522401,8.63088412352432,7.29608520487659,6.58947391651396,2.87536413054709,7.44281895337007,6.24075346229121,2.77836765741823,2.15276896226295,3.37710464954357,26.9739657643243,16.2962614122617,20.3706220552532,14.5980773766662,16.6630076284836,17.9231695462743,25.9467568565755,28.4895125872386,29.4777719478577,33.2197034473162,40.8204207763167,31.297893110706,26.0754322617502,26.6154267789981,0,0.54390568381871,5.4094070032094,2.75936746304733,5.9403718295483,5.86058432961016,8.19674726883377,6.81671503451807,10.4117712407365,13.6653560503823,18.7418356027535,15.7719406648684,11.1399337041197,11.3230612315533,16.5972387686707,12.2747460322751,13.0444966722353,3.53453448063988,13.3423680095772,25.6414469280848,22.8041743095006,14.5173708215831,0,13.8384962608339,10.883648050731,5.28094223316515,7.97315110778086,7.99331384654211,11.1124166062335,10.5424781548477,12.4774082434652,5.05658812697306,7.37930260024991,6.18813259489121,6.80879211507576,20.3469036255381,23.1552043971131,17.1469628025274,11.3497749531055,15.3397183137781,13.3284706687718,12.178597964584,2.58138878870081,3.81297727554876,1.10264199027481,4.28704257647848,15.5005849628069,9.95163261314572,8.23669173621642,6.23735419031233,3.78925087618806,4.82105785227325,12.6444451790411,13.4151464176095,10.926477114813,18.8368457004691,18.8638034255015,16.2432502976631,8.66889992968662,9.79660166265606,9.53579819250524,4.77335309007557,22.1435195506795,14.2323626988794,11.1245501046455,8.78170843260769,7.20596460362386,10.519419018016,13.4725132832298,9.16145796944104,4.40690909192096,1.24267862617385,9.01908701894705,18.8390848015413,16.2149320647956,22.3618866595655,19.2448136981819,19.4299544314395,21.5937319108187,18.6192270326849,18.0358072412223,16.4277202161684,9.50499020650956,12.0084225838708,15.4071163620525,11.4009162452958,8.70469513951227,16.2914293057408,13.3116507703447,15.9859947861559,11.9628517011408,10.0966449948148,12.574123098075,11.5950112907367,11.9873193309895,11.1605736302782,11.5708133159753,4.53460767230423,3.99574716073316,2.69141569828427,2.01461539636894,8.50034213741638,4.69206188627955,8.97442958909599,5.57357785605571,0.501572104035363,2.82375921308533,5.06357760157895,4.58316410751517,3.43706364687375,2.74033007908257,2.2661816921691,2.70009000092722,3.60256962579376,4.53142408984205,3.62432218226274,19.408233998241,23.5424675306608,19.2928974502172,14.5864030240976,11.738337107167,9.74370594785075,12.2235700290888,10.7138229764225,13.1576875932644,9.09709962349671,11.660047794951,9.61994341068989,10.8624148665064,13.8294329194518,12.0040130117232,16.1939855036245,13.9061191133827,12.3461901096771,13.1867488257058,13.2479028120958,9.25746981440622,12.0683548188349,11.4449371174714,11.482366913954,11.8577819323317,13.0306496153182,11.5244622909847,13.41655528333,13.716215498432,13.4674145197857,14.2362021749009,13.2981051207011,13.0953933814301,12.8597578184352,10.8027702149439,17.4867404556562,12.1644436391612,12.8922632428979,11.4772999241306,13.0148937280514,9.04284558919644
|short_description=p1@Rgs12
}}
}}

Revision as of 18:08, 18 April 2012

Short description:p1@Rgs12
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rgs12_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000030984, ENSMUST00000128161, NM_173402, uc008xdf.2, uc008xdg.2_5end
EntrezGene:Rgs12
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rgs12

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A317.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.19
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F75.31
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D99.02
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B310.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B818.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C322.05
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.49
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E822.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D526.13
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.63
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.24
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.48
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F238.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D826.05
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.86
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E117.15
Mouse Schwann, donor1.CNhs12507.11728-123D92.95
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.01
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G614.08
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.85
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C517.00
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I111.99
adrenal gland, embryo E18.CNhs11026.1262-18F57.54
adrenal gland, neonate N00.CNhs11191.1311-23C113.41
adrenal gland, neonate N25.CNhs11223.1377-27I311.18
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F513.59
bone (os femoris), neonate N16.CNhs11225.1525-43A612.59
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.39
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.43
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A45.99
corpus striatum, adult.CNhs10487.19-21D86.41
corpus striatum, neonate N00.CNhs11226.630-43F118.35
cortex, adult.CNhs10473.12-14D57.13
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B26.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B116.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.32
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G42.95
eyeball, embryo E12.CNhs11016.345-16C620.04
eyeball, embryo E14.CNhs10521.399-16E214.02
eyeball, embryo E15.CNhs10593.426-16C918.01
eyeball, embryo E17.CNhs11023.1261-18D419.29
eyeball, neonate N00.CNhs11207.633-15C624.36
eyeball, neonate N01.CNhs11140.1532-43E721.78
eyeball, neonate N02.CNhs11205.1551-44G823.14
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E228.24
forelimb, embryo E12.CNhs10600.359-14H223.83
forelimb, embryo E13.CNhs10589.384-1E220.76
forelimb, embryo E14.CNhs10577.413-26A819.07
forelimb, embryo E15.CNhs11007.437-20E715.01
forelimb, embryo E17.CNhs10598.1517-43C49.75
forelimb, embryo E18.CNhs11008.1520-43B512.35
gonad, embryo E13.CNhs11044.1564-45I620.30
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.21
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.41
heart, embryo E11.CNhs10586.331-24E918.23
heart, embryo E12.CNhs11015.353-12F516.42
heart, embryo E13.CNhs11013.376-3I914.77
heart, embryo E14.CNhs10597.403-26D418.23
heart, embryo E15.CNhs11017.431-16C816.92
heart, embryo E16.CNhs11021.457-17C617.28
heart, embryo E17.CNhs11025.479-18E515.35
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E321.02
heart, neonate N03.CNhs11221.1349-25I225.34
heart, neonate N10.CNhs11118.749-24G116.42
heart, neonate N16.CNhs11209.782-15G118.56
heart, neonate N20.CNhs11127.821-26I616.37
heart, neonate N25.CNhs11196.1351-25D312.95
heart, neonate N30.CNhs11202.1390-42D216.51
hippocampus, adult.CNhs10478.13-16E86.52
hippocampus, neonate N00.CNhs11228.627-43G113.69
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I516.64
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D89.92
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D38.23
intestine, embryo E18.CNhs10526.1289-20F75.14
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.12
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F26.17
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E32.16
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F814.17
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I213.03
kidney, embryo E18.CNhs11001.1288-20C711.83
kidney, neonate N00.CNhs11214.646-21G715.43
kidney, neonate N10.CNhs11206.758-6D512.90
kidney, neonate N20.CNhs11113.832-19I14.13
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H17.03
liver, adult pregnant day01.CNhs10466.508-5B21.19
liver, embryo E12.CNhs10601.355-15F812.35
liver, embryo E13.CNhs10524.378-3H67.67
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G48.63
liver, neonate N00.CNhs11117.641-24F47.30
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A32.78
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B126.97
lung, embryo E12.CNhs10522.354-16G216.30
lung, embryo E14.CNhs10604.404-26F820.37
lung, embryo E15.CNhs11020.432-17C514.60
lung, embryo E16.CNhs10998.458-17B616.66
lung, embryo E17.CNhs10605.480-44A617.92
lung, embryo E18.CNhs10583.1287-20I625.95
lung, neonate N00.CNhs11224.640-42C628.49
lung, neonate N06.CNhs11212.683-20E529.48
lung, neonate N07.CNhs11111.715-19A333.22
lung, neonate N10.CNhs11219.750-23E640.82
lung, neonate N20.CNhs11109.822-18A431.30
lung, neonate N25.CNhs11119.1359-25C726.08
lung, neonate N30.CNhs11133.1394-42H226.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C25.94
medulla oblongata, neonate N30.CNhs11200.1396-42A35.86
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.20
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.41
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E213.67
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.74
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D715.77
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D811.14
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.32
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I713.34
ovary, embryo E18.CNhs11040.505-44H725.64
ovary, neonate N00.CNhs11217.1299-22I422.80
oviduct, adult pregnant day01.CNhs10500.988-6G614.52
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F413.84
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D812.48
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G86.81
pituitary gland, embryo E12.CNhs11018.346-16E620.35
pituitary gland, embryo E13.CNhs11009.370-44C723.16
pituitary gland, embryo E14.CNhs11037.398-44A517.15
pituitary gland, embryo E15.CNhs10592.427-16B911.35
pituitary gland, embryo E16.CNhs11036.449-43F615.34
pituitary gland, embryo E17.CNhs11039.1265-44F513.33
pituitary gland, neonate N00.CNhs11190.1308-22E912.18
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C34.29
skin, neonate N00.CNhs11124.650-25G415.50
skin, neonate N03.CNhs11215.662-22H39.95
skin, neonate N06.CNhs11097.693-20I58.24
skin, neonate N10.CNhs11108.762-6C46.24
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G212.64
spleen, embryo E16.CNhs11035.461-43C113.42
spleen, embryo E18.CNhs11011.1271-21F210.93
spleen, neonate N10.CNhs11116.752-24D118.84
spleen, neonate N20.CNhs11112.824-19H118.86
spleen, neonate N25.CNhs11099.1354-25G316.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.67
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.54
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E322.14
stomach, embryo E15.CNhs10603.1252-16G814.23
stomach, embryo E16.CNhs11022.459-17D411.12
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B810.52
stomach, neonate N07.CNhs11210.718-18A913.47
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F518.84
testis, embryo E15.CNhs11034.443-27C516.21
testis, embryo E16.CNhs11033.470-26G522.36
testis, embryo E17.CNhs11029.486-18I519.24
testis, embryo E18.CNhs11027.503-18G519.43
testis, neonate N00.CNhs11189.1300-22B721.59
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D918.04
testis, neonate N20.CNhs11110.839-18H316.43
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I415.41
thymus, embryo E15.CNhs11005.430-45I211.40
thymus, embryo E16.CNhs11002.456-26C58.70
thymus, embryo E17.CNhs10581.478-18C116.29
thymus, embryo E18.CNhs10595.1273-19G413.31
thymus, neonate N02.CNhs11181.1541-43F815.99
thymus, neonate N03.CNhs11137.2104-43C711.96
thymus, neonate N06.CNhs11197.681-26C410.10
thymus, neonate N07.CNhs11211.713-19D312.57
thymus, neonate N10.CNhs11194.748-24E411.60
thymus, neonate N20.CNhs11186.820-7A211.99
thymus, neonate N25.CNhs11125.1362-25G711.16
thymus, neonate N30.CNhs11132.1393-42G211.57
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E48.50
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E58.97
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I819.41
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H219.29
whole body, embryo E14.5.CNhs10578.420-27D214.59
whole body, embryo E14.CNhs10519.395-14B111.74
whole body, embryo E16.CNhs10514.453-14F29.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G513.16
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.86
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G516.19
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.25
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.52
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.86
whole body, embryo E17.5.CNhs10513.490-9F910.80
whole body, embryo E17.CNhs10517.475-3I517.49
whole body, embryo E18.CNhs10516.493-3B312.16
whole body, neonate N00.CNhs10525.657-19C212.89
whole body, neonate N01.CNhs10576.659-23C611.48
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B49.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:35292084..35292153,%2B&oldid=927909"