Personal tools

FFCP PHASE1:Mm9::chr5:31829362..31829407,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:31829362..31829407,+
|short_description=p1@Slc4a1ap
|description=CAGE_peak_1_at_Slc4a1ap_5end
|association_with_transcript=0bp_to_ENSMUST00000031023,ENSMUST00000114533,ENSMUST00000117262,ENSMUST00000117319,ENSMUST00000127416,ENSMUST00000146720,NM_009206,uc008wyn.1,uc008wyo.1,uc008wyp.1,uc008wyq.1_5end
|EntrezGene=20534
|EntrezGene=20534
|HGNC=
|HGNC=
|UniProt=Q5BKS1,E9Q585,E9PX68,E9Q1Q0,Q3UUI2,Q6GQW1
|UniProt=Q5BKS1,E9Q585,E9PX68,E9Q1Q0,Q3UUI2,Q6GQW1
|association_with_transcript=0bp_to_ENSMUST00000031023,ENSMUST00000114533,ENSMUST00000117262,ENSMUST00000117319,ENSMUST00000127416,ENSMUST00000146720,NM_009206,uc008wyn.1,uc008wyo.1,uc008wyp.1,uc008wyq.1_5end
|description=CAGE_peak_1_at_Slc4a1ap_5end
|id=chr5:31829362..31829407,+
|ontology_enrichment_disease=
|phase1_expression=17.9366708757369,19.5426228278042,20.4749657725291,18.4503168897166,12.5223932486587,20.1455126294268,19.1562365288331,31.5060909197446,25.4827587094517,24.1086462111653,31.5041061534929,38.0513198407755,34.2401459862411,36.1046261990459,15.9892685671518,21.0574278085419,15.3903613188192,34.0699138586897,36.0610960383093,24.6145998042858,26.9587229778891,21.3475545081903,23.7691808116431,17.4391740844813,14.6821939882989,12.6331032105304,19.3842898271584,22.1935369666466,18.6222951067246,11.5933859689568,14.1907526819395,13.9706748161119,9.84103660135312,0,12.1317680295535,11.470190529736,13.6793468695787,23.4377713212668,21.0960543021426,28.2702821745851,19.9998705930545,20.4913645487534,20.3914348273085,25.1793635951155,20.88364783122,25.5129985504737,10.1710874765245,4.36050312760893,5.93152693383074,7.77719596297134,9.51907667052465,2.87505128729943,33.8920864236627,33.3666585325218,24.1987535382574,18.2654199585522,12.8940047972441,16.5015069528782,16.3876333296274,18.5146842745212,14.5781222806421,7.45457970552091,7.11435836888911,9.44894703145469,7.9109309005358,6.3943210345149,7.19040265244171,7.68436610643109,17.0050964185903,17.9557897981149,18.0879466762189,13.4255962669788,16.3442720304194,16.4137670948038,14.6643570657902,16.5459381589804,27.5289702498472,23.3667828695894,28.5708151856613,16.2220133908138,17.8400905024699,16.6692278578163,23.1721889171146,28.7008931116157,26.586895113165,25.6326869362091,21.2133804390663,24.791126294765,14.5394291199713,16.3990285431725,21.7398366526258,16.3480536626463,11.5595126730318,16.7307989407723,20.7928453583254,15.2329141613094,19.24088555805,13.1231348385104,21.0426663728324,10.2468476607999,15.3519327556582,10.2661181931454,0,7.11066703153331,15.5873549528074,15.454951793981,19.2099289105618,19.6396273116783,32.3672354558965,17.3677302705845,14.3992821215893,20.3991870469135,15.4512383161559,16.2780451796832,21.6363221129697,11.4356598110005,17.3036477414062,18.9425157565084,19.4614321428972,16.5002186946357,17.4464799583711,17.9403843660032,14.9113408974498,25.4719293400046,25.1336048176146,10.2182822083437,20.7280165395242,11.3981518888747,17.4086211090099,30.7070810779887,32.9400434029411,22.9947464366542,27.638066910572,29.9187085076487,31.3759947284936,30.3391161936707,21.895463227818,17.6657898266332,17.1851475734899,21.2546274445339,21.5999935318088,16.5529515192101,14.945156773844,19.591626318643,27.4187091579851,24.2134931338366,20.8954845768195,27.1638539275966,20.2633913356872,18.5323958564463,20.762232651346,16.4396799320681,23.0779216857246,19.1538691587192,20.3724315043864,19.1072896145753,17.5553296828309,14.9261786126535,17.3339734631312,15.7415587126981,16.8858763186389,11.1638478105829,17.7558551688908,16.3314312350345,14.8096428371883,16.0448421877781,17.1694976895756,17.7483320398098,13.3293478429919,14.2825693748813,14.6734545277999,15.0585987048092,19.9790604914856,16.1047702512446,26.2862435705159,21.6099685996497,12.5559137533843,11.3713743665324,19.6225190492415,18.3466970769746,18.1703120464152,15.7313149206207,15.3440850252961,11.9842144450912,11.3886974770683,14.3288090609889,12.5667604400135,17.110256595539,12.6726656627428,9.88701349519644,15.561939590978,16.1304431336037,16.5011073829181,21.7072173958485,19.1603150644237,19.1432248174595,18.6194387680921,22.233054905231,19.8562726570168,18.0084380535115,13.815888050041,21.4711065223933,18.3800628794032,18.8534969459186,15.9212786041694,19.5630037774823,22.7203335955123,16.8824011826692,18.5876871800436,16.686375972147,18.321280625579,13.7280706594041,37.3797336971122,21.2120340171047,15.2898459826135,18.9434158460334,18.477933592757,24.6046195895317,20.3228509183265,18.380666941737,21.0224819610213,18.3324692637203,18.5405296147917,15.5780819420889,17.377185784679,19.7084984336377,23.960541904141,22.3679336545263,17.5400245523236,22.2854108013404,18.9953480052485,20.3955172599931,10.5553898757491,13.5976420954677,19.6705709207614,19.3155722413313,29.2202073777781,31.8815787530793,17.8689090460576,18.4303776859192,14.5133780931478,15.6175497718655,21.5423397732799,19.5954414321093,20.2746793414979,14.7199796010193,19.4309136803949,18.4121190484126,16.9973744517005,34.3813808571334,19.4457916735328,11.9303954457061,22.9670612688542,18.6416238958965,21.2392221343941,16.5090832585387,14.2092071773433,17.1630622577867,15.0603965369194,17.8312385807478,21.9664049192988,23.2661586865604,17.1118741624666,18.0140952023415,11.5960469432499,17.5330423521918,23.8307724027652,19.4465981553815,17.0753462593236,18.0043109426538,21.9901889716419,22.2961022002588,19.7458824722545,15.8321773539592,19.477751769288,21.183207086382,18.0833286405069,26.5466867235783,27.1260236849121,17.6113740790215,17.9058516004705,19.2044852701722,18.3632927076806,32.2640025498287,15.3783792718067,21.2578474002119,20.1862034832986,22.0391094695488,19.8206630195487,18.0734756833153,18.3576704393364,20.4329120392541,22.9411956515344,16.2294005062569,22.30168754747,21.1452245811923,17.7128758947754,17.3543285692009,17.0322799722019,17.3975006836419,17.4398791580459,13.8730649251536,16.7203315546413,22.9895545842163,74.9711608449973,21.231349538245,17.2076830075382,21.1951795295012,16.2741377581941,21.4574279373288,21.8284463881102,20.832701575032,27.4731482395362,38.895043452987,47.2369210262899,17.3806116345498,17.4343685149541,19.8232147328117,19.0983609777359,22.3783369584352,22.4509930902829,19.471662822235,21.1196023859645,21.6068202889036,27.6630708157649,20.5685417679155,23.9746386619791,18.9537328031449,28.6348410344844,16.5513180039104,23.974482964399,28.4392925452038,22.6644232091506,18.3530114330581,17.4544702169599,18.4983140509938,14.5770497773765,17.5550236412377,44.0506437241312,35.9053684475598,40.1026859407578,23.7157391634289,30.8287133896789,35.5035131773159,32.4010800111267,27.9199145999017,31.2668262199101,27.4412965228465,19.9271707361619,23.5424675306608,16.7318933639051,19.9347507996001,17.1882793354945,18.0166638281014,15.1127774905098,18.1310850370227,15.4041220604071,15.6672271293554,16.7296337927558,19.6171395041519,17.7918864192777,18.4392438926024,15.3352702111487,17.1465728861907,16.803227262004,11.9603716687497,11.9504911232959,17.3694725758589,15.7719856097291,15.795346748181,14.5446075867866,18.0229556624087,19.1983136047274,14.5537125573684,15.0000937755674,16.8364615320219,16.8397101168869,19.0788372363631,13.1684870117833,15.2681947682123,13.0953933814301,16.8881156892703,16.0112487114347,15.2384452542147,13.8019648982791,20.8424922426849,21.0417165275728,15.4413993383661,17.8538233427725
|phase1_expression=17.9366708757369,19.5426228278042,20.4749657725291,18.4503168897166,12.5223932486587,20.1455126294268,19.1562365288331,31.5060909197446,25.4827587094517,24.1086462111653,31.5041061534929,38.0513198407755,34.2401459862411,36.1046261990459,15.9892685671518,21.0574278085419,15.3903613188192,34.0699138586897,36.0610960383093,24.6145998042858,26.9587229778891,21.3475545081903,23.7691808116431,17.4391740844813,14.6821939882989,12.6331032105304,19.3842898271584,22.1935369666466,18.6222951067246,11.5933859689568,14.1907526819395,13.9706748161119,9.84103660135312,0,12.1317680295535,11.470190529736,13.6793468695787,23.4377713212668,21.0960543021426,28.2702821745851,19.9998705930545,20.4913645487534,20.3914348273085,25.1793635951155,20.88364783122,25.5129985504737,10.1710874765245,4.36050312760893,5.93152693383074,7.77719596297134,9.51907667052465,2.87505128729943,33.8920864236627,33.3666585325218,24.1987535382574,18.2654199585522,12.8940047972441,16.5015069528782,16.3876333296274,18.5146842745212,14.5781222806421,7.45457970552091,7.11435836888911,9.44894703145469,7.9109309005358,6.3943210345149,7.19040265244171,7.68436610643109,17.0050964185903,17.9557897981149,18.0879466762189,13.4255962669788,16.3442720304194,16.4137670948038,14.6643570657902,16.5459381589804,27.5289702498472,23.3667828695894,28.5708151856613,16.2220133908138,17.8400905024699,16.6692278578163,23.1721889171146,28.7008931116157,26.586895113165,25.6326869362091,21.2133804390663,24.791126294765,14.5394291199713,16.3990285431725,21.7398366526258,16.3480536626463,11.5595126730318,16.7307989407723,20.7928453583254,15.2329141613094,19.24088555805,13.1231348385104,21.0426663728324,10.2468476607999,15.3519327556582,10.2661181931454,0,7.11066703153331,15.5873549528074,15.454951793981,19.2099289105618,19.6396273116783,32.3672354558965,17.3677302705845,14.3992821215893,20.3991870469135,15.4512383161559,16.2780451796832,21.6363221129697,11.4356598110005,17.3036477414062,18.9425157565084,19.4614321428972,16.5002186946357,17.4464799583711,17.9403843660032,14.9113408974498,25.4719293400046,25.1336048176146,10.2182822083437,20.7280165395242,11.3981518888747,17.4086211090099,30.7070810779887,32.9400434029411,22.9947464366542,27.638066910572,29.9187085076487,31.3759947284936,30.3391161936707,21.895463227818,17.6657898266332,17.1851475734899,21.2546274445339,21.5999935318088,16.5529515192101,14.945156773844,19.591626318643,27.4187091579851,24.2134931338366,20.8954845768195,27.1638539275966,20.2633913356872,18.5323958564463,20.762232651346,16.4396799320681,23.0779216857246,19.1538691587192,20.3724315043864,19.1072896145753,17.5553296828309,14.9261786126535,17.3339734631312,15.7415587126981,16.8858763186389,11.1638478105829,17.7558551688908,16.3314312350345,14.8096428371883,16.0448421877781,17.1694976895756,17.7483320398098,13.3293478429919,14.2825693748813,14.6734545277999,15.0585987048092,19.9790604914856,16.1047702512446,26.2862435705159,21.6099685996497,12.5559137533843,11.3713743665324,19.6225190492415,18.3466970769746,18.1703120464152,15.7313149206207,15.3440850252961,11.9842144450912,11.3886974770683,14.3288090609889,12.5667604400135,17.110256595539,12.6726656627428,9.88701349519644,15.561939590978,16.1304431336037,16.5011073829181,21.7072173958485,19.1603150644237,19.1432248174595,18.6194387680921,22.233054905231,19.8562726570168,18.0084380535115,13.815888050041,21.4711065223933,18.3800628794032,18.8534969459186,15.9212786041694,19.5630037774823,22.7203335955123,16.8824011826692,18.5876871800436,16.686375972147,18.321280625579,13.7280706594041,37.3797336971122,21.2120340171047,15.2898459826135,18.9434158460334,18.477933592757,24.6046195895317,20.3228509183265,18.380666941737,21.0224819610213,18.3324692637203,18.5405296147917,15.5780819420889,17.377185784679,19.7084984336377,23.960541904141,22.3679336545263,17.5400245523236,22.2854108013404,18.9953480052485,20.3955172599931,10.5553898757491,13.5976420954677,19.6705709207614,19.3155722413313,29.2202073777781,31.8815787530793,17.8689090460576,18.4303776859192,14.5133780931478,15.6175497718655,21.5423397732799,19.5954414321093,20.2746793414979,14.7199796010193,19.4309136803949,18.4121190484126,16.9973744517005,34.3813808571334,19.4457916735328,11.9303954457061,22.9670612688542,18.6416238958965,21.2392221343941,16.5090832585387,14.2092071773433,17.1630622577867,15.0603965369194,17.8312385807478,21.9664049192988,23.2661586865604,17.1118741624666,18.0140952023415,11.5960469432499,17.5330423521918,23.8307724027652,19.4465981553815,17.0753462593236,18.0043109426538,21.9901889716419,22.2961022002588,19.7458824722545,15.8321773539592,19.477751769288,21.183207086382,18.0833286405069,26.5466867235783,27.1260236849121,17.6113740790215,17.9058516004705,19.2044852701722,18.3632927076806,32.2640025498287,15.3783792718067,21.2578474002119,20.1862034832986,22.0391094695488,19.8206630195487,18.0734756833153,18.3576704393364,20.4329120392541,22.9411956515344,16.2294005062569,22.30168754747,21.1452245811923,17.7128758947754,17.3543285692009,17.0322799722019,17.3975006836419,17.4398791580459,13.8730649251536,16.7203315546413,22.9895545842163,74.9711608449973,21.231349538245,17.2076830075382,21.1951795295012,16.2741377581941,21.4574279373288,21.8284463881102,20.832701575032,27.4731482395362,38.895043452987,47.2369210262899,17.3806116345498,17.4343685149541,19.8232147328117,19.0983609777359,22.3783369584352,22.4509930902829,19.471662822235,21.1196023859645,21.6068202889036,27.6630708157649,20.5685417679155,23.9746386619791,18.9537328031449,28.6348410344844,16.5513180039104,23.974482964399,28.4392925452038,22.6644232091506,18.3530114330581,17.4544702169599,18.4983140509938,14.5770497773765,17.5550236412377,44.0506437241312,35.9053684475598,40.1026859407578,23.7157391634289,30.8287133896789,35.5035131773159,32.4010800111267,27.9199145999017,31.2668262199101,27.4412965228465,19.9271707361619,23.5424675306608,16.7318933639051,19.9347507996001,17.1882793354945,18.0166638281014,15.1127774905098,18.1310850370227,15.4041220604071,15.6672271293554,16.7296337927558,19.6171395041519,17.7918864192777,18.4392438926024,15.3352702111487,17.1465728861907,16.803227262004,11.9603716687497,11.9504911232959,17.3694725758589,15.7719856097291,15.795346748181,14.5446075867866,18.0229556624087,19.1983136047274,14.5537125573684,15.0000937755674,16.8364615320219,16.8397101168869,19.0788372363631,13.1684870117833,15.2681947682123,13.0953933814301,16.8881156892703,16.0112487114347,15.2384452542147,13.8019648982791,20.8424922426849,21.0417165275728,15.4413993383661,17.8538233427725
|short_description=p1@Slc4a1ap
}}
}}

Revision as of 18:02, 18 April 2012

Short description:p1@Slc4a1ap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Slc4a1ap_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000031023, ENSMUST00000114533, ENSMUST00000117262, ENSMUST00000117319, ENSMUST00000127416, ENSMUST00000146720, NM_009206, uc008wyn.1, uc008wyo.1, uc008wyp.1, uc008wyq.1_5end
EntrezGene:Slc4a1ap
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Slc4a1ap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.94
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.47
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.45
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.15
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I819.16
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E931.51
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E631.50
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F138.05
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E434.24
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E836.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A234.07
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A436.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A326.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H221.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.77
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.68
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I119.38
GP2+ M cell, pool3.CNhs13240.11847-124I222.19
Ileum epithelium, pool1.CNhs13199.10252-104B918.62
Ileum epithelium, pool2.CNhs13232.10253-104C111.59
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C814.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F512.13
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.47
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F713.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H328.27
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G920.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H220.49
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H420.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A233.89
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A124.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.27
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E112.89
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C516.50
Mouse Granule cells, donor1.CNhs12131.11713-123C316.39
Mouse Granule cells, donor2.CNhs12357.11731-123E318.51
Mouse Granule cells, donor3.CNhs12108.11636-122C714.58
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.45
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.09
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D516.34
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F323.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.57
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D416.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.84
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.17
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.70
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I626.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D625.63
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.21
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E124.79
Mouse Schwann, donor1.CNhs12507.11728-123D914.54
Mouse Schwann, donor2.CNhs12573.11746-123F916.40
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C411.56
Mouse hepatocyte, donor3.CNhs12615.11637-122C816.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.23
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.24
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.45
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G319.21
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.64
accessory axillary lymph node, adult.CNhs10475.1063-29H932.37
adrenal gland, adult.CNhs10508.49-24D717.37
adrenal gland, embryo E14.CNhs11038.406-44C514.40
adrenal gland, embryo E16.CNhs11004.1254-43D620.40
adrenal gland, embryo E17.CNhs11043.1263-45I115.45
adrenal gland, embryo E18.CNhs11026.1262-18F516.28
adrenal gland, neonate N00.CNhs11191.1311-23C121.64
adrenal gland, neonate N25.CNhs11223.1377-27I311.44
amnion, adult pregnant day17.5.CNhs10488.583-22A817.30
aorta, adult.CNhs10498.46-23H118.94
bone (os femoris), adult.CNhs10483.56-12G219.46
bone (os femoris), neonate N02.CNhs11227.1985-43F516.50
bone (os femoris), neonate N16.CNhs11225.1525-43A617.45
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B225.47
cerebellum, neonate N30.CNhs11135.1395-42I225.13
colon, adult.CNhs10468.36-18H710.22
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C720.73
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.41
corpora quadrigemina, adult.CNhs10501.16-22A430.71
corpus striatum, adult.CNhs10487.19-21D832.94
corpus striatum, neonate N00.CNhs11226.630-43F122.99
cortex, adult.CNhs10473.12-14D527.64
cortex, neonate N30.CNhs11107.1392-42F229.92
diencephalon, adult.CNhs10482.20-12F231.38
diencephalon, neonate N30.CNhs11201.1388-42B230.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B121.90
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.67
epididymis, adult.CNhs10490.58-23B217.19
eyeball, adult.CNhs10484.31-12G421.25
eyeball, embryo E12.CNhs11016.345-16C621.60
eyeball, embryo E14.CNhs10521.399-16E216.55
eyeball, embryo E15.CNhs10593.426-16C914.95
eyeball, embryo E17.CNhs11023.1261-18D419.59
eyeball, neonate N00.CNhs11207.633-15C627.42
eyeball, neonate N01.CNhs11140.1532-43E724.21
eyeball, neonate N02.CNhs11205.1551-44G820.90
eyeball, neonate N16.CNhs11188.777-19A227.16
forelimb, embryo E11.CNhs10596.335-25E220.26
forelimb, embryo E12.CNhs10600.359-14H218.53
forelimb, embryo E13.CNhs10589.384-1E220.76
forelimb, embryo E14.CNhs10577.413-26A816.44
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C419.15
forelimb, embryo E18.CNhs11008.1520-43B520.37
gonad, embryo E13.CNhs11044.1564-45I619.11
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C817.56
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D214.93
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D517.33
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F516.89
heart, embryo E13.CNhs11013.376-3I911.16
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C816.33
heart, embryo E16.CNhs11021.457-17C614.81
heart, embryo E17.CNhs11025.479-18E516.04
heart, embryo E18.CNhs11030.1283-20G317.17
heart, neonate N00.CNhs11213.639-21E317.75
heart, neonate N03.CNhs11221.1349-25I213.33
heart, neonate N10.CNhs11118.749-24G114.28
heart, neonate N16.CNhs11209.782-15G114.67
heart, neonate N20.CNhs11127.821-26I615.06
heart, neonate N25.CNhs11196.1351-25D319.98
heart, neonate N30.CNhs11202.1390-42D216.10
hippocampus, adult.CNhs10478.13-16E826.29
hippocampus, neonate N00.CNhs11228.627-43G121.61
intestinal mucosa, adult.CNhs10506.860-29I312.56
intestine, adult.CNhs10496.178-9A311.37
intestine, embryo E12.CNhs11019.1251-16I519.62
intestine, embryo E13.CNhs11010.381-16D518.35
intestine, embryo E15.CNhs10602.976-16D818.17
intestine, embryo E16.CNhs10585.463-22H415.73
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F711.98
intestine, neonate N00.CNhs11126.644-26D111.39
intestine, neonate N01.CNhs11192.1322-23E914.33
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F217.11
intestine, neonate N10.CNhs11098.755-23A512.67
intestine, neonate N20.CNhs11187.827-18D19.89
intestine, neonate N25.CNhs11121.1352-25E315.56
intestine, neonate N30.CNhs11131.1384-42G116.13
kidney, embryo E14.CNhs10606.411-4I916.50
kidney, embryo E15.CNhs10997.434-16F821.71
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C718.62
kidney, neonate N00.CNhs11214.646-21G722.23
kidney, neonate N10.CNhs11206.758-6D519.86
kidney, neonate N20.CNhs11113.832-19I118.01
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H121.47
liver, adult pregnant day01.CNhs10466.508-5B218.38
liver, embryo E12.CNhs10601.355-15F818.85
liver, embryo E13.CNhs10524.378-3H615.92
liver, embryo E14.CNhs10594.409-16E119.56
liver, embryo E15.CNhs10520.433-16D722.72
liver, embryo E16.CNhs10523.462-17F516.88
liver, embryo E17.CNhs10510.481-18A318.59
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F418.32
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A837.38
liver, neonate N07.CNhs11103.716-20H221.21
liver, neonate N10.CNhs11115.751-24B915.29
liver, neonate N20.CNhs11220.823-25A318.94
liver, neonate N25.CNhs11198.1368-26H118.48
liver, neonate N30.CNhs11106.1382-42D124.60
lung, adult.CNhs10474.28-22B120.32
lung, embryo E12.CNhs10522.354-16G218.38
lung, embryo E14.CNhs10604.404-26F821.02
lung, embryo E15.CNhs11020.432-17C518.33
lung, embryo E16.CNhs10998.458-17B618.54
lung, embryo E17.CNhs10605.480-44A615.58
lung, embryo E18.CNhs10583.1287-20I617.38
lung, neonate N00.CNhs11224.640-42C619.71
lung, neonate N06.CNhs11212.683-20E523.96
lung, neonate N07.CNhs11111.715-19A322.37
lung, neonate N10.CNhs11219.750-23E617.54
lung, neonate N20.CNhs11109.822-18A422.29
lung, neonate N25.CNhs11119.1359-25C719.00
lung, neonate N30.CNhs11133.1394-42H220.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.60
mammary gland, adult lactating day02.CNhs10480.595-22B619.67
mammary gland, adult pregnant day19.CNhs10476.588-5H219.32
medulla oblongata, adult.CNhs10477.17-12C229.22
medulla oblongata, neonate N30.CNhs11200.1396-42A331.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C717.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C218.43
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E114.51
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E215.62
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E321.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.60
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.27
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.41
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.00
olfactory brain, adult.CNhs10489.18-22I934.38
ovary, adult.CNhs10507.91-2I719.45
ovary, embryo E18.CNhs11040.505-44H711.93
ovary, neonate N00.CNhs11217.1299-22I422.97
oviduct, adult pregnant day01.CNhs10500.988-6G618.64
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E517.16
pancreas, embryo E17.CNhs10599.1558-45G315.06
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G921.97
pancreas, neonate N01.CNhs11138.1531-43D723.27
pancreas, neonate N02.CNhs11139.1539-43D817.11
pancreas, neonate N16.CNhs11136.787-43B618.01
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G823.83
pituitary gland, embryo E12.CNhs11018.346-16E619.45
pituitary gland, embryo E13.CNhs11009.370-44C717.08
pituitary gland, embryo E14.CNhs11037.398-44A518.00
pituitary gland, embryo E15.CNhs10592.427-16B921.99
pituitary gland, embryo E16.CNhs11036.449-43F622.30
pituitary gland, embryo E17.CNhs11039.1265-44F519.75
pituitary gland, neonate N00.CNhs11190.1308-22E915.83
placenta, adult pregnant day10.CNhs10472.539-13I719.48
placenta, adult pregnant day17.CNhs10464.577-18G321.18
prostate, adult.CNhs10470.859-1F818.08
skin, adult.CNhs10492.30-1C326.55
skin, neonate N00.CNhs11124.650-25G427.13
skin, neonate N03.CNhs11215.662-22H317.61
skin, neonate N06.CNhs11097.693-20I517.91
skin, neonate N10.CNhs11108.762-6C419.20
small intestine, neonate N16.CNhs11114.790-21I118.36
spinal cord, adult.CNhs10505.24-13C932.26
spleen, adult.CNhs10465.25-2G215.38
spleen, embryo E16.CNhs11035.461-43C121.26
spleen, embryo E18.CNhs11011.1271-21F220.19
spleen, neonate N10.CNhs11116.752-24D122.04
spleen, neonate N20.CNhs11112.824-19H119.82
spleen, neonate N25.CNhs11099.1354-25G318.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.94
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E322.30
stomach, embryo E15.CNhs10603.1252-16G821.15
stomach, embryo E16.CNhs11022.459-17D417.71
stomach, embryo E17.CNhs11006.1035-18D517.35
stomach, embryo E18.CNhs10999.1286-20C617.03
stomach, neonate N03.CNhs11193.1340-24B817.40
stomach, neonate N07.CNhs11210.718-18A917.44
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I116.72
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G574.97
testis, embryo E13.CNhs11031.389-23F521.23
testis, embryo E15.CNhs11034.443-27C517.21
testis, embryo E16.CNhs11033.470-26G521.20
testis, embryo E17.CNhs11029.486-18I516.27
testis, embryo E18.CNhs11027.503-18G521.46
testis, neonate N00.CNhs11189.1300-22B721.83
testis, neonate N07.CNhs11222.726-26I420.83
testis, neonate N10.CNhs11204.763-44D927.47
testis, neonate N20.CNhs11110.839-18H338.90
testis, neonate N30.CNhs11130.1391-42E247.24
thymus, adult.CNhs10471.38-12B517.38
thymus, embryo E14.CNhs11041.402-44I417.43
thymus, embryo E15.CNhs11005.430-45I219.82
thymus, embryo E16.CNhs11002.456-26C519.10
thymus, embryo E17.CNhs10581.478-18C122.38
thymus, embryo E18.CNhs10595.1273-19G422.45
thymus, neonate N02.CNhs11181.1541-43F819.47
thymus, neonate N03.CNhs11137.2104-43C721.12
thymus, neonate N06.CNhs11197.681-26C421.61
thymus, neonate N07.CNhs11211.713-19D327.66
thymus, neonate N10.CNhs11194.748-24E420.57
thymus, neonate N20.CNhs11186.820-7A223.97
thymus, neonate N25.CNhs11125.1362-25G718.95
thymus, neonate N30.CNhs11132.1393-42G228.63
tongue, adult.CNhs10499.32-1B416.55
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.97
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G522.66
urinary bladder, adult.CNhs10481.879-12E418.35
uterus, adult pregnant day19.CNhs10497.590-15F517.45
uterus, adult.CNhs10509.92-27E518.50
vagina, adult.CNhs10502.89-27D514.58
vesicular gland, adult.CNhs10491.51-27F817.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A144.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A235.91
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D723.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A430.83
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A632.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.92
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A831.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A927.44
whole body, embryo E11.CNhs11014.324-5I819.93
whole body, embryo E12.CNhs10587.857-27C923.54
whole body, embryo E13.CNhs10512.372-23H216.73
whole body, embryo E14.5.CNhs10578.420-27D219.93
whole body, embryo E14.CNhs10519.395-14B117.19
whole body, embryo E16.CNhs10514.453-14F218.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.73
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.79
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.44
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G515.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G517.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G511.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.80
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G514.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G519.08
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G516.89
whole body, embryo E17.5.CNhs10513.490-9F916.01
whole body, embryo E17.CNhs10517.475-3I515.24
whole body, embryo E18.CNhs10516.493-3B313.80
whole body, neonate N00.CNhs10525.657-19C220.84
whole body, neonate N01.CNhs10576.659-23C621.04
whole body, neonate N06.CNhs10515.692-21D115.44
whole body, neonate N10.CNhs10518.761-6B417.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:31829362..31829407,%2B&oldid=927112"