Personal tools

FFCP PHASE1:Mm9::chr5:22056209..22056260,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:22056209..22056260,+
|short_description=p1@Lhfpl3
|description=CAGE_peak_1_at_Lhfpl3_5end
|association_with_transcript=0bp_to_ENSMUST00000134294,ENSMUST00000140148,uc008wpr.1,uc008wps.1,uc008wpt.1_5end
|EntrezGene=269629
|EntrezGene=269629
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000134294,ENSMUST00000140148,uc008wpr.1,uc008wps.1,uc008wpt.1_5end
|description=CAGE_peak_1_at_Lhfpl3_5end
|id=chr5:22056209..22056260,+
|ontology_enrichment_disease=
|phase1_expression=3.04282809499109,0.348975407639361,0,0.30246421130683,0,0.839396359559449,1.86890112476421,2.1950964985068,0.281577444303333,0.234064526321993,1.88339765048055,1.83475965689274,1.54080656938085,1.39872643870396,0.333109761815663,0.809901069559304,1.39912375625629,1.57731082679119,2.33094537129756,0.84877930359606,9.18467533631554,0.794327609607082,0.522399578277871,1.75991665072747,0.45881856213434,0,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0.221730510655305,0.635030673459631,1.23012957516914,15.8481681015439,1.73310971850765,1.16364251750945,2.45003227514843,0.837063261473815,0,1.57057123192139,0,0,0.971020706062307,1.6366586336825,2.02753862439029,2.38610777810186,1.56478268869608,1.09012578190223,0.219686182734472,0.972149495371417,0.979904951377538,0,1.8456086666351,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,2.06268836910977,0.809265843438391,1.5869729378161,0,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,1.15265491596466,0.933206510776299,0.945041568321835,0.841299845405528,1.99955689082663,1.32521124570968,0.857435594504678,0.575072826109418,1.83843757322004,2.20231761998777,2.93680877595932,1.68967186581868,0.791317726381163,0.548925861614458,0,1.11673199600552,2.25105044012672,2.29197371665215,1.17851434189467,2.13557521198654,1.3047961207771,2.49896437999507,1.20914496170857,2.89864488701678,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,1.34408066129201,2.52799956237153,1.1930122580464,1.29893002301434,0.70667914902068,2.67602497575693,5.13305909657271,0,0,1.5154372870785,1.77351905832569,3.0331466700887,1.1418387971906,2.07150306917737,2.52351636410202,1.56136794089522,1.52232739156071,0.922461989024234,1.3565037649736,1.99900802130698,1.13099932196708,0.988779870937496,2.89198713839823,2.65383165584962,0.647067399789637,1.98757366614354,0.969750506270444,3.72783522436244,2.63502717310392,2.30391377494801,1.27728527604296,0.599075622529601,1.19980546198682,0.762421362438388,4.34392854273986,6.8625090422794,1.7591609295801,4.17178368461463,2.81287003063364,3.53239675751252,4.38051410282946,1.52759045775474,3.11017426525233,4.0435641349388,3.99839526184301,2.08192708740326,1.37941262660084,1.80062129805349,1.50704817835715,1.36072998302656,1.40925092313335,1.3118241438362,3.62184719034622,0.862271971731369,3.9712276835242,3.34307135911503,3.06874025398605,3.33656699070717,2.78601733217733,2.88094990971121,2.38841120182192,0.702213187313235,0.257347907114715,0.568326998791185,0.828503090142008,1.64168241986767,1.80062061461015,1.42046841351126,1.57411385397923,1.85120535464854,2.55787339225449,1.07309360559848,2.21854150497622,1.6455984991348,2.13417703302824,3.16168357228837,2.77779976108131,3.07370161407471,2.95254121272818,3.57492912559016,1.9551876352064,0.660837565967596,0.528901133327089,1.2797295032114,2.09013004674395,2.06187938115349,2.42020229548011,1.55664630691409,3.23383564391351,1.42358718463353,0.988193728344065,1.00534083520108,2.78539060857611,2.14460495831032,1.79763881730844,1.94524244887225,2.19055400579804,1.32767530667157,2.05647322697512,3.38123207019241,2.8511185898344,2.71533482034676,2.66516115583211,3.22506339333712,2.95220295959204,3.1399745568275,2.46794327843601,0.889357881261447,0.667380422864376,0.589676985339609,0.674586337154561,0.811440485554012,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,0.823684239564244,4.31304619582064,0.744281895337007,1.5601883655728,2.27320990152401,2.87035861635059,2.8946611281802,1.66277871149944,2.27389694124582,2.93336957595647,1.86719594352707,1.87752198630802,2.51259386162724,1.90434912708811,1.56106918286239,2.99506773801763,3.32197034473162,2.23236676120482,2.62181303545181,1.55416483679306,1.73578870297814,0,0,2.45882136509518,1.65562047782839,5.61927064957272,4.57125577709592,1.47541450839008,3.7870639080656,1.26203287766503,0.780877488593277,2.58508077279359,1.43381278771531,0.668396022247182,1.13230612315533,0.809621403349789,0.876767573733936,1.97643888973262,1.92792789853084,3.97432238583152,1.6025904330053,1.95464351224291,3.62934270539578,1.32745138339963,1.94224508923985,1.81394134178851,1.50884063804718,1.77181135728464,1.53717573971964,1.55056975900933,4.72593848320757,1.78248689192361,4.42451461110142,4.21674434299995,2.06271086496374,4.08527526904546,2.16073312837572,1.55230420539305,1.50035924522115,3.54680467284547,3.74574516964348,1.81003922662333,0.608929898229199,0.704015124191131,3.1774810629573,1.32317038832977,4.122156323537,1.93757312035087,2.5934557719107,1.67121281604391,3.11867709515616,2.04036585640896,4.82105785227325,0.683483523191411,1.03193433981611,1.29636169158798,0.565105371014073,1.77702496037333,1.37266903923914,1.18984900995699,0.69975726161829,0.414599921413271,0.954670618015114,2.05618395827738,2.43983360552218,1.72808545314882,2.71814784818809,1.09181281873089,1.88810084938749,1.90102948168273,3.14107130380836,0.777689839750757,3.10669656543463,52.4234432976297,2.24274819065968,2.48187735685646,0.972255941720238,2.19571699912143,2.02747350588934,2.93393096614385,2.99470085141085,2.41176492179135,18.8435614244285,25.0586105444343,1.58005560314089,1.62180172232131,1.74608627180206,0.909445760844565,1.9692936523423,2.18549490259391,1.44234539423963,1.9199638532695,1.81739609906666,1.752756553065,1.91569751759997,1.26695244961678,1.73181314952593,1.98690733708667,1.58711268530648,1.55390167361845,0.62799699626633,1.84673078000486,3.09103350451505,2.25218970541418,2.56412273974171,4.07299920250225,2.50786052017682,3.95326289831947,4.14292712856459,1.14579102687879,2.06223818812425,3.42541259885321,3.0215755895588,2.70009000092722,5.40385443869065,3.62513927187364,4.14208249401456,1.45302286617847,2.79317411380722,1.87806966329548,2.67417388775123,1.25767897576789,0.551530525350042,2.00022055021454,2.88449080134452,3.53011130550997,3.03236654116557,1.01391719956096,2.07488975524684,1.68554713445788,2.43295579138503,2.46972516509137,2.38146845641537,1.50649623728312,2.70072908649187,0.412085900803307,2.35518272215036,3.08582327146874,2.30718548007139,2.62279808942053,2.18019624948493,1.2234219453993,2.62305284464197,1.28049581010941,1.31534855718921,1.90125759384206,3.36685362994643,2.13543032623513,1.57607171800902,1.63692417267876,3.25367366490529,0.578719832943424,2.24829520144151,2.57324769289949,1.28922632428979,0.765153328275374,3.08827986767322,1.15933917810211
|phase1_expression=3.04282809499109,0.348975407639361,0,0.30246421130683,0,0.839396359559449,1.86890112476421,2.1950964985068,0.281577444303333,0.234064526321993,1.88339765048055,1.83475965689274,1.54080656938085,1.39872643870396,0.333109761815663,0.809901069559304,1.39912375625629,1.57731082679119,2.33094537129756,0.84877930359606,9.18467533631554,0.794327609607082,0.522399578277871,1.75991665072747,0.45881856213434,0,0.430761996159075,0.646413698057667,0.570070258369122,0.252030129759931,0.221730510655305,0.635030673459631,1.23012957516914,15.8481681015439,1.73310971850765,1.16364251750945,2.45003227514843,0.837063261473815,0,1.57057123192139,0,0,0.971020706062307,1.6366586336825,2.02753862439029,2.38610777810186,1.56478268869608,1.09012578190223,0.219686182734472,0.972149495371417,0.979904951377538,0,1.8456086666351,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,2.06268836910977,0.809265843438391,1.5869729378161,0,0.677689064138264,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,1.15265491596466,0.933206510776299,0.945041568321835,0.841299845405528,1.99955689082663,1.32521124570968,0.857435594504678,0.575072826109418,1.83843757322004,2.20231761998777,2.93680877595932,1.68967186581868,0.791317726381163,0.548925861614458,0,1.11673199600552,2.25105044012672,2.29197371665215,1.17851434189467,2.13557521198654,1.3047961207771,2.49896437999507,1.20914496170857,2.89864488701678,0.860423876981386,2.03991400112325,1.07940638327563,1.29955283489534,1.34408066129201,2.52799956237153,1.1930122580464,1.29893002301434,0.70667914902068,2.67602497575693,5.13305909657271,0,0,1.5154372870785,1.77351905832569,3.0331466700887,1.1418387971906,2.07150306917737,2.52351636410202,1.56136794089522,1.52232739156071,0.922461989024234,1.3565037649736,1.99900802130698,1.13099932196708,0.988779870937496,2.89198713839823,2.65383165584962,0.647067399789637,1.98757366614354,0.969750506270444,3.72783522436244,2.63502717310392,2.30391377494801,1.27728527604296,0.599075622529601,1.19980546198682,0.762421362438388,4.34392854273986,6.8625090422794,1.7591609295801,4.17178368461463,2.81287003063364,3.53239675751252,4.38051410282946,1.52759045775474,3.11017426525233,4.0435641349388,3.99839526184301,2.08192708740326,1.37941262660084,1.80062129805349,1.50704817835715,1.36072998302656,1.40925092313335,1.3118241438362,3.62184719034622,0.862271971731369,3.9712276835242,3.34307135911503,3.06874025398605,3.33656699070717,2.78601733217733,2.88094990971121,2.38841120182192,0.702213187313235,0.257347907114715,0.568326998791185,0.828503090142008,1.64168241986767,1.80062061461015,1.42046841351126,1.57411385397923,1.85120535464854,2.55787339225449,1.07309360559848,2.21854150497622,1.6455984991348,2.13417703302824,3.16168357228837,2.77779976108131,3.07370161407471,2.95254121272818,3.57492912559016,1.9551876352064,0.660837565967596,0.528901133327089,1.2797295032114,2.09013004674395,2.06187938115349,2.42020229548011,1.55664630691409,3.23383564391351,1.42358718463353,0.988193728344065,1.00534083520108,2.78539060857611,2.14460495831032,1.79763881730844,1.94524244887225,2.19055400579804,1.32767530667157,2.05647322697512,3.38123207019241,2.8511185898344,2.71533482034676,2.66516115583211,3.22506339333712,2.95220295959204,3.1399745568275,2.46794327843601,0.889357881261447,0.667380422864376,0.589676985339609,0.674586337154561,0.811440485554012,0.482354319504834,0.25462585178142,0.287696137450811,0.648540907100142,0.823684239564244,4.31304619582064,0.744281895337007,1.5601883655728,2.27320990152401,2.87035861635059,2.8946611281802,1.66277871149944,2.27389694124582,2.93336957595647,1.86719594352707,1.87752198630802,2.51259386162724,1.90434912708811,1.56106918286239,2.99506773801763,3.32197034473162,2.23236676120482,2.62181303545181,1.55416483679306,1.73578870297814,0,0,2.45882136509518,1.65562047782839,5.61927064957272,4.57125577709592,1.47541450839008,3.7870639080656,1.26203287766503,0.780877488593277,2.58508077279359,1.43381278771531,0.668396022247182,1.13230612315533,0.809621403349789,0.876767573733936,1.97643888973262,1.92792789853084,3.97432238583152,1.6025904330053,1.95464351224291,3.62934270539578,1.32745138339963,1.94224508923985,1.81394134178851,1.50884063804718,1.77181135728464,1.53717573971964,1.55056975900933,4.72593848320757,1.78248689192361,4.42451461110142,4.21674434299995,2.06271086496374,4.08527526904546,2.16073312837572,1.55230420539305,1.50035924522115,3.54680467284547,3.74574516964348,1.81003922662333,0.608929898229199,0.704015124191131,3.1774810629573,1.32317038832977,4.122156323537,1.93757312035087,2.5934557719107,1.67121281604391,3.11867709515616,2.04036585640896,4.82105785227325,0.683483523191411,1.03193433981611,1.29636169158798,0.565105371014073,1.77702496037333,1.37266903923914,1.18984900995699,0.69975726161829,0.414599921413271,0.954670618015114,2.05618395827738,2.43983360552218,1.72808545314882,2.71814784818809,1.09181281873089,1.88810084938749,1.90102948168273,3.14107130380836,0.777689839750757,3.10669656543463,52.4234432976297,2.24274819065968,2.48187735685646,0.972255941720238,2.19571699912143,2.02747350588934,2.93393096614385,2.99470085141085,2.41176492179135,18.8435614244285,25.0586105444343,1.58005560314089,1.62180172232131,1.74608627180206,0.909445760844565,1.9692936523423,2.18549490259391,1.44234539423963,1.9199638532695,1.81739609906666,1.752756553065,1.91569751759997,1.26695244961678,1.73181314952593,1.98690733708667,1.58711268530648,1.55390167361845,0.62799699626633,1.84673078000486,3.09103350451505,2.25218970541418,2.56412273974171,4.07299920250225,2.50786052017682,3.95326289831947,4.14292712856459,1.14579102687879,2.06223818812425,3.42541259885321,3.0215755895588,2.70009000092722,5.40385443869065,3.62513927187364,4.14208249401456,1.45302286617847,2.79317411380722,1.87806966329548,2.67417388775123,1.25767897576789,0.551530525350042,2.00022055021454,2.88449080134452,3.53011130550997,3.03236654116557,1.01391719956096,2.07488975524684,1.68554713445788,2.43295579138503,2.46972516509137,2.38146845641537,1.50649623728312,2.70072908649187,0.412085900803307,2.35518272215036,3.08582327146874,2.30718548007139,2.62279808942053,2.18019624948493,1.2234219453993,2.62305284464197,1.28049581010941,1.31534855718921,1.90125759384206,3.36685362994643,2.13543032623513,1.57607171800902,1.63692417267876,3.25367366490529,0.578719832943424,2.24829520144151,2.57324769289949,1.28922632428979,0.765153328275374,3.08827986767322,1.15933917810211
|short_description=p1@Lhfpl3
}}
}}

Revision as of 17:51, 18 April 2012

Short description:p1@Lhfpl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lhfpl3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000134294, ENSMUST00000140148, uc008wpr.1, uc008wps.1, uc008wpt.1_5end
EntrezGene:Lhfpl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lhfpl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.83
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.40
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.58
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.33
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.94
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.79
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F91.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.68
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H92.07
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.36
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H12.89
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D86.86
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B24.38
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.11
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H23.97
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G13.16
heart, neonate N20.CNhs11127.821-26I62.78
heart, neonate N25.CNhs11196.1351-25D33.07
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E83.57
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D52.09
intestine, embryo E15.CNhs10602.976-16D82.06
intestine, embryo E16.CNhs10585.463-22H42.42
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F22.79
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G12.19
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.67
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I12.95
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A62.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E53.00
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A42.62
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I73.97
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.95
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.54
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D74.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B64.42
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H32.59
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C43.12
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.89
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G552.42
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I52.20
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I42.99
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H318.84
testis, neonate N30.CNhs11130.1391-42E225.06
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.19
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E41.92
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G21.99
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E43.09
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I81.45
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.14
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:22056209..22056260,%2B&oldid=925420"