Personal tools

FFCP PHASE1:Mm9::chr4:34634511..34634558,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:34634511..34634558,-
|short_description=p2@Slc35a1
|description=CAGE_peak_2_at_Slc35a1_5end
|association_with_transcript=-7bp_to_ENSMUST00000124456_5end
|EntrezGene=24060
|EntrezGene=24060
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=-7bp_to_ENSMUST00000124456_5end
|description=CAGE_peak_2_at_Slc35a1_5end
|id=chr4:34634511..34634558,-
|ontology_enrichment_disease=
|phase1_expression=4.96461426024861,0.348975407639361,0.454999239389536,2.11724947914781,0,1.6787927191189,1.63528848416868,8.52213934714403,3.94208422024667,3.5109678948299,6.16384685611818,5.58405112967355,8.21763503669787,6.8187913886818,2.6648780945253,1.82227740650843,0.699561878128147,9.14840279538889,7.12995054749842,5.94145512517242,4.33720779770456,3.57447424323187,4.70159620450084,4.7997726838022,4.5881856213434,2.8711598205751,0.86152399231815,3.44753972297422,3.80046838912748,1.51218077855958,2.88249663851896,1.27006134691926,1.23012957516914,0,2.59966457776147,2.99222361645286,2.85837098767317,0.837063261473815,1.5626706890476,3.14114246384279,1.17646297606203,4.09827290975067,3.88408282424923,2.89562681343828,2.73717714292689,4.40512205188036,0.782391344348039,0.436050312760893,0.878744730937887,1.1665793944457,1.25987779462826,0,4.36234775750115,5.07753499407941,5.37750078627942,1.80081605225163,3.15186783932632,3.09403255366465,3.23706337375356,3.1739458756322,2.53532561402472,1.0165335962074,1.77858959222228,0.899899717281399,0,1.4209602298922,0.299600110518405,0.384218305321555,2.28117147078651,1.21505344498522,2.52389953621658,3.99911378165325,1.76694832761291,2.69479758272899,2.01275489138296,1.83843757322004,5.50579404996943,5.49055553766307,6.75868746327471,2.50583946687368,3.20206752608434,2.08365348222704,7.53794097303729,8.4414391504752,7.79271063661732,4.12480019663135,4.41352210477219,2.98239113320481,2.49896437999507,2.26714680320357,8.69593466105033,11.185510400758,4.0798280022465,5.39703191637817,7.14754059192436,4.48026887097336,6.03911006566533,2.38602451609281,2.33807404142582,3.5333957451034,3.23939865486365,1.28326477414318,2.54805239706646,0,1.5154372870785,1.77351905832569,1.01104889002957,6.05174562511018,25.63485048107,6.53145411885229,3.29622120855658,1.21786191324856,3.45923245884088,4.52167921657868,4.70354828542819,4.77533047052767,3.46072954828123,11.7125479105128,2.65383165584962,3.23533699894818,4.41683036920787,3.87900202508178,9.31958806090611,12.5895742714965,14.6612694769419,3.57639877292028,4.91242010474273,4.79922184794726,5.71816021828791,10.3355541189328,8.23501085073528,9.92669381691629,10.6032835317289,9.97290283588289,9.76603809429932,12.8170597823529,5.19380755636613,5.72272064806428,10.3616330957807,9.6803253707778,4.94457683258274,6.66716102857071,5.76198815377118,4.9732589885786,6.5995404176788,7.43059577652129,7.02762934197966,8.01980449290949,2.80238390812695,8.32066752738405,7.2139960907219,4.82230611340665,3.61461423993277,3.1342694986995,4.93877127379064,5.57295947091781,5.61770549850588,6.43369767786788,5.11494298912067,4.34964122324554,2.57978665979206,2.70093092191522,3.31442629819294,2.36117078096885,5.55361606394562,3.0229412817553,3.48755421819505,4.90414437942112,5.26591519723137,5.08919138645195,3.56702762001765,4.67839959761063,5.04965265169416,5.09984391289413,10.0939175310781,6.5858951922742,2.31293148088659,3.43785736662608,4.90562976231038,5.34144345279009,3.8660238396628,3.83198696784351,5.11469500843202,4.94586627892654,2.84717436926707,5.92916237006439,4.52403375840485,3.78017296878187,3.8992817423824,1.79763881730844,3.45820879799511,5.37681437786791,1.51734320762465,4.68418901699888,3.38123207019241,4.2766778847516,5.81857461502877,5.96154469067708,6.0707075639287,7.97094799089852,8.63493003127561,12.9567022117891,10.9687472022245,0.83422552858047,1.37591296579242,1.12431056192427,2.02860121388503,3.37648023653384,3.8193877767213,1.72617682470486,2.91843408195064,3.56929837144506,7.18841032636773,4.83783231969054,6.24075346229121,5.55673531483646,4.12614051100398,13.0259750768109,8.68339993783042,3.7898282354097,3.25929952884052,3.73439188705414,5.86725620721255,7.20276906999808,8.09348379012447,5.07347484430277,5.83250033192907,6.2010113101657,6.218735977642,8.1931657357869,8.63424909329478,10.7040303350319,6.03165135757089,5.4390568381871,6.39293554924747,5.24279817978992,9.9541365792431,10.0802050469295,2.29508923527346,5.80683132570058,5.04813151066011,7.02789739733949,6.67812532971677,2.38968797952552,4.90157082981267,3.67999490025482,5.26253912177363,2.92255857911312,11.0680577825027,13.4954952897159,8.51640511249612,3.5613120733451,6.67836533349662,5.77395430403874,3.98235415019888,3.15614827001476,3.02323556964751,3.77210159511796,3.2483208216885,2.76691633149535,4.9101375701962,5.08947221268508,5.70395805415554,3.79244109522979,0,3.09406629744561,13.9580238359053,5.58189391497062,2.8458910432206,3.00071849044229,7.62563004661776,4.63758925765383,8.06290200950393,4.26250928760439,3.28540391289194,1.90648863777438,3.52845436887939,5.93590510589328,3.55221738730992,3.25689794612042,2.74556391207214,2.79039529566604,3.20628920292836,10.3838169125885,3.93003025835061,3.09580301944834,3.70389054739423,4.1441060541032,1.77702496037333,5.94823250336959,5.26933132980952,6.29781535456461,6.49539876880792,4.77335309007557,5.06137589729817,5.89626454667861,4.75223499615926,3.3454127362315,4.58561383866973,6.06889558731693,4.87655388779482,6.80565449158477,9.59150802359267,12.4267862617385,1.12738587736838,4.48549638131936,3.80554528051325,3.50012139019286,4.26227417476513,4.56181538825101,8.68443565978579,6.51021924219751,4.40409246587986,3.14059357073808,3.16833006883652,6.63623353319174,1.41907650703115,1.33524244314275,3.50786222040047,4.29664069601955,3.9736270956253,5.52899067791857,6.4983391956814,7.37055084621478,5.33447646584999,7.9652686258104,7.11442529400193,7.88937101450702,11.4539364137938,4.0811469050738,1.77588762699252,1.25599399253266,2.01461539636894,7.53439416725543,4.129014459926,6.22715522508701,2.14368379079066,8.02515366456581,9.03602948187307,8.28585425712918,8.59343270159095,8.59265911718438,9.59115527678899,9.82012066606611,10.1253375034771,11.2580300806055,10.4222754066367,12.9440077937955,1.14166082342594,4.38927360741134,4.78054096111576,5.34834777550247,1.88651846365184,0.919217542250071,3.77819437262746,3.5025959730612,2.56735367673452,5.55933865880354,4.30914809813408,3.58390048633545,2.52832070168682,3.77748399188729,3.79074095107048,3.33405583898152,3.70829843023538,3.8581844092741,3.70877310722976,6.03515572551029,3.77156177623957,5.14679837862079,3.57654284920981,3.63366041580821,4.51725025993587,4.82303264982556,4.75612729469209,4.47218509444333,4.07412341537585,6.73370725989286,2.96587545310435,3.64466584789585,2.86461730218783,4.18329471202108,4.05103883060397,3.2475375131933,5.38042699424439,6.01638951335235,5.16478496585877,3.75005412503176,7.41977073985349
|phase1_expression=4.96461426024861,0.348975407639361,0.454999239389536,2.11724947914781,0,1.6787927191189,1.63528848416868,8.52213934714403,3.94208422024667,3.5109678948299,6.16384685611818,5.58405112967355,8.21763503669787,6.8187913886818,2.6648780945253,1.82227740650843,0.699561878128147,9.14840279538889,7.12995054749842,5.94145512517242,4.33720779770456,3.57447424323187,4.70159620450084,4.7997726838022,4.5881856213434,2.8711598205751,0.86152399231815,3.44753972297422,3.80046838912748,1.51218077855958,2.88249663851896,1.27006134691926,1.23012957516914,0,2.59966457776147,2.99222361645286,2.85837098767317,0.837063261473815,1.5626706890476,3.14114246384279,1.17646297606203,4.09827290975067,3.88408282424923,2.89562681343828,2.73717714292689,4.40512205188036,0.782391344348039,0.436050312760893,0.878744730937887,1.1665793944457,1.25987779462826,0,4.36234775750115,5.07753499407941,5.37750078627942,1.80081605225163,3.15186783932632,3.09403255366465,3.23706337375356,3.1739458756322,2.53532561402472,1.0165335962074,1.77858959222228,0.899899717281399,0,1.4209602298922,0.299600110518405,0.384218305321555,2.28117147078651,1.21505344498522,2.52389953621658,3.99911378165325,1.76694832761291,2.69479758272899,2.01275489138296,1.83843757322004,5.50579404996943,5.49055553766307,6.75868746327471,2.50583946687368,3.20206752608434,2.08365348222704,7.53794097303729,8.4414391504752,7.79271063661732,4.12480019663135,4.41352210477219,2.98239113320481,2.49896437999507,2.26714680320357,8.69593466105033,11.185510400758,4.0798280022465,5.39703191637817,7.14754059192436,4.48026887097336,6.03911006566533,2.38602451609281,2.33807404142582,3.5333957451034,3.23939865486365,1.28326477414318,2.54805239706646,0,1.5154372870785,1.77351905832569,1.01104889002957,6.05174562511018,25.63485048107,6.53145411885229,3.29622120855658,1.21786191324856,3.45923245884088,4.52167921657868,4.70354828542819,4.77533047052767,3.46072954828123,11.7125479105128,2.65383165584962,3.23533699894818,4.41683036920787,3.87900202508178,9.31958806090611,12.5895742714965,14.6612694769419,3.57639877292028,4.91242010474273,4.79922184794726,5.71816021828791,10.3355541189328,8.23501085073528,9.92669381691629,10.6032835317289,9.97290283588289,9.76603809429932,12.8170597823529,5.19380755636613,5.72272064806428,10.3616330957807,9.6803253707778,4.94457683258274,6.66716102857071,5.76198815377118,4.9732589885786,6.5995404176788,7.43059577652129,7.02762934197966,8.01980449290949,2.80238390812695,8.32066752738405,7.2139960907219,4.82230611340665,3.61461423993277,3.1342694986995,4.93877127379064,5.57295947091781,5.61770549850588,6.43369767786788,5.11494298912067,4.34964122324554,2.57978665979206,2.70093092191522,3.31442629819294,2.36117078096885,5.55361606394562,3.0229412817553,3.48755421819505,4.90414437942112,5.26591519723137,5.08919138645195,3.56702762001765,4.67839959761063,5.04965265169416,5.09984391289413,10.0939175310781,6.5858951922742,2.31293148088659,3.43785736662608,4.90562976231038,5.34144345279009,3.8660238396628,3.83198696784351,5.11469500843202,4.94586627892654,2.84717436926707,5.92916237006439,4.52403375840485,3.78017296878187,3.8992817423824,1.79763881730844,3.45820879799511,5.37681437786791,1.51734320762465,4.68418901699888,3.38123207019241,4.2766778847516,5.81857461502877,5.96154469067708,6.0707075639287,7.97094799089852,8.63493003127561,12.9567022117891,10.9687472022245,0.83422552858047,1.37591296579242,1.12431056192427,2.02860121388503,3.37648023653384,3.8193877767213,1.72617682470486,2.91843408195064,3.56929837144506,7.18841032636773,4.83783231969054,6.24075346229121,5.55673531483646,4.12614051100398,13.0259750768109,8.68339993783042,3.7898282354097,3.25929952884052,3.73439188705414,5.86725620721255,7.20276906999808,8.09348379012447,5.07347484430277,5.83250033192907,6.2010113101657,6.218735977642,8.1931657357869,8.63424909329478,10.7040303350319,6.03165135757089,5.4390568381871,6.39293554924747,5.24279817978992,9.9541365792431,10.0802050469295,2.29508923527346,5.80683132570058,5.04813151066011,7.02789739733949,6.67812532971677,2.38968797952552,4.90157082981267,3.67999490025482,5.26253912177363,2.92255857911312,11.0680577825027,13.4954952897159,8.51640511249612,3.5613120733451,6.67836533349662,5.77395430403874,3.98235415019888,3.15614827001476,3.02323556964751,3.77210159511796,3.2483208216885,2.76691633149535,4.9101375701962,5.08947221268508,5.70395805415554,3.79244109522979,0,3.09406629744561,13.9580238359053,5.58189391497062,2.8458910432206,3.00071849044229,7.62563004661776,4.63758925765383,8.06290200950393,4.26250928760439,3.28540391289194,1.90648863777438,3.52845436887939,5.93590510589328,3.55221738730992,3.25689794612042,2.74556391207214,2.79039529566604,3.20628920292836,10.3838169125885,3.93003025835061,3.09580301944834,3.70389054739423,4.1441060541032,1.77702496037333,5.94823250336959,5.26933132980952,6.29781535456461,6.49539876880792,4.77335309007557,5.06137589729817,5.89626454667861,4.75223499615926,3.3454127362315,4.58561383866973,6.06889558731693,4.87655388779482,6.80565449158477,9.59150802359267,12.4267862617385,1.12738587736838,4.48549638131936,3.80554528051325,3.50012139019286,4.26227417476513,4.56181538825101,8.68443565978579,6.51021924219751,4.40409246587986,3.14059357073808,3.16833006883652,6.63623353319174,1.41907650703115,1.33524244314275,3.50786222040047,4.29664069601955,3.9736270956253,5.52899067791857,6.4983391956814,7.37055084621478,5.33447646584999,7.9652686258104,7.11442529400193,7.88937101450702,11.4539364137938,4.0811469050738,1.77588762699252,1.25599399253266,2.01461539636894,7.53439416725543,4.129014459926,6.22715522508701,2.14368379079066,8.02515366456581,9.03602948187307,8.28585425712918,8.59343270159095,8.59265911718438,9.59115527678899,9.82012066606611,10.1253375034771,11.2580300806055,10.4222754066367,12.9440077937955,1.14166082342594,4.38927360741134,4.78054096111576,5.34834777550247,1.88651846365184,0.919217542250071,3.77819437262746,3.5025959730612,2.56735367673452,5.55933865880354,4.30914809813408,3.58390048633545,2.52832070168682,3.77748399188729,3.79074095107048,3.33405583898152,3.70829843023538,3.8581844092741,3.70877310722976,6.03515572551029,3.77156177623957,5.14679837862079,3.57654284920981,3.63366041580821,4.51725025993587,4.82303264982556,4.75612729469209,4.47218509444333,4.07412341537585,6.73370725989286,2.96587545310435,3.64466584789585,2.86461730218783,4.18329471202108,4.05103883060397,3.2475375131933,5.38042699424439,6.01638951335235,5.16478496585877,3.75005412503176,7.41977073985349
|short_description=p2@Slc35a1
}}
}}

Revision as of 15:53, 18 April 2012

Short description:p2@Slc35a1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Slc35a1_5end
Coexpression cluster:NA
Association with transcript: -7bp_to_ENSMUST00000124456_5end
EntrezGene:Slc35a1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Slc35a1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E98.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.94
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.16
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.58
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.22
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.82
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.59
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B93.80
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.60
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.86
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.74
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.38
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C33.24
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.51
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.54
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D92.50
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.70
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.24
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.05
accessory axillary lymph node, adult.CNhs10475.1063-29H925.63
adrenal gland, adult.CNhs10508.49-24D76.53
adrenal gland, embryo E14.CNhs11038.406-44C53.30
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.46
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C14.70
adrenal gland, neonate N25.CNhs11223.1377-27I34.78
amnion, adult pregnant day17.5.CNhs10488.583-22A83.46
aorta, adult.CNhs10498.46-23H111.71
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F53.24
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I214.66
colon, adult.CNhs10468.36-18H73.58
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A410.34
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F19.93
cortex, adult.CNhs10473.12-14D510.60
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B212.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.19
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.72
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C64.94
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D44.97
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E77.43
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H28.32
forelimb, embryo E13.CNhs10589.384-1E27.21
forelimb, embryo E14.CNhs10577.413-26A84.82
forelimb, embryo E15.CNhs11007.437-20E73.61
forelimb, embryo E17.CNhs10598.1517-43C43.13
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.43
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E53.02
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I25.27
heart, neonate N10.CNhs11118.749-24G15.09
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I64.68
heart, neonate N25.CNhs11196.1351-25D35.05
heart, neonate N30.CNhs11202.1390-42D25.10
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G16.59
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A33.44
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D83.87
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D35.11
intestine, embryo E18.CNhs10526.1289-20F74.95
intestine, neonate N00.CNhs11126.644-26D12.85
intestine, neonate N01.CNhs11192.1322-23E95.93
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F84.68
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G75.96
kidney, neonate N10.CNhs11206.758-6D56.07
kidney, neonate N20.CNhs11113.832-19I17.97
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B210.97
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A33.82
liver, embryo E18.CNhs10579.499-43G41.73
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G23.79
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C53.73
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A67.20
lung, embryo E18.CNhs10583.1287-20I68.09
lung, neonate N00.CNhs11224.640-42C65.07
lung, neonate N06.CNhs11212.683-20E55.83
lung, neonate N07.CNhs11111.715-19A36.20
lung, neonate N10.CNhs11219.750-23E66.22
lung, neonate N20.CNhs11109.822-18A48.19
lung, neonate N25.CNhs11119.1359-25C78.63
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H25.24
medulla oblongata, adult.CNhs10477.17-12C29.95
medulla oblongata, neonate N30.CNhs11200.1396-42A310.08
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D611.07
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I46.68
oviduct, adult pregnant day01.CNhs10500.988-6G65.77
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B63.79
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G813.96
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B97.63
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F58.06
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G43.55
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I52.75
skin, neonate N10.CNhs11108.762-6C42.79
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C910.38
spleen, adult.CNhs10465.25-2G23.93
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G35.95
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.50
stomach, adult.CNhs10503.33-1H64.77
stomach, embryo E12.CNhs10588.356-43E35.06
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B86.07
stomach, neonate N07.CNhs11210.718-18A94.88
stomach, neonate N25.CNhs11104.1355-25E46.81
stomach, neonate N30.CNhs11134.1386-42I19.59
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F54.49
testis, embryo E15.CNhs11034.443-27C53.81
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I54.26
testis, embryo E18.CNhs11027.503-18G54.56
testis, neonate N00.CNhs11189.1300-22B78.68
testis, neonate N07.CNhs11222.726-26I46.51
testis, neonate N10.CNhs11204.763-44D94.40
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F85.53
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C47.37
thymus, neonate N07.CNhs11211.713-19D35.33
thymus, neonate N10.CNhs11194.748-24E47.97
thymus, neonate N20.CNhs11186.820-7A27.11
thymus, neonate N25.CNhs11125.1362-25G77.89
thymus, neonate N30.CNhs11132.1393-42G211.45
tongue, adult.CNhs10499.32-1B44.08
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.01
urinary bladder, adult.CNhs10481.879-12E47.53
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E56.23
vagina, adult.CNhs10502.89-27D52.14
vesicular gland, adult.CNhs10491.51-27F88.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.59
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A49.59
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H24.78
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.57
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.78
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F94.05
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C65.16
whole body, neonate N06.CNhs10515.692-21D13.75
whole body, neonate N10.CNhs10518.761-6B47.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:34634511..34634558,-&oldid=907512"