Personal tools

FFCP PHASE1:Mm9::chr1:158869684..158869746,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr1:158869684..158869746,-
|short_description=p1@Ralgps2
|description=CAGE_peak_1_at_Ralgps2_5end
|association_with_transcript=10bp_to_ENSMUST00000027886,ENSMUST00000063199,ENSMUST00000165172,ENSMUST00000172057,NM_001159965,NM_001159967,NM_001159968,NM_023884,NR_027640,uc007dcu.2,uc007dcv.2,uc007dcw.2,uc007dcx.2,uc007dcy.2,uc007dcz.2,uc007ddb.2,uc011wuj.1_5end
|EntrezGene=78255
|EntrezGene=78255
|HGNC=
|HGNC=
|UniProt=Q9ERD6,Q8C134
|UniProt=Q9ERD6,Q8C134
|association_with_transcript=10bp_to_ENSMUST00000027886,ENSMUST00000063199,ENSMUST00000165172,ENSMUST00000172057,NM_001159965,NM_001159967,NM_001159968,NM_023884,NR_027640,uc007dcu.2,uc007dcv.2,uc007dcw.2,uc007dcx.2,uc007dcy.2,uc007dcz.2,uc007ddb.2,uc011wuj.1_5end
|description=CAGE_peak_1_at_Ralgps2_5end
|id=chr1:158869684..158869746,-
|ontology_enrichment_disease=
|phase1_expression=39.0763186935697,60.7217209292488,60.5148988388083,131.874396129778,91.1630228502352,27.364321321638,24.9965525437212,52.6823159641631,22.5261955442667,23.6405171585213,6.50628279256919,9.33334260245436,33.8977445263787,49.0428457570575,20.3196954707554,29.9663395736942,10.4934281719222,134.860075690647,154.665081107273,145.141260914926,44.1374675884052,0,0,36.7982572424835,36.0172571275457,35.6023817751313,30.5841017272943,29.3040876452809,37.624637052362,44.6093329675077,28.1597748532237,19.6859508772486,9.84103660135312,15.8481681015439,22.2415747208481,21.942973187321,23.6836453264348,1.67412652294763,2.3440060335714,2.61761871986899,2.35292595212406,6.14740936462601,6.79714494243615,3.27331726736501,4.76471576731718,2.9367480345869,1.56478268869608,10.9012578190223,5.71184075109627,8.1660557611199,10.7789544651529,8.62515386189829,126.843650179649,31.9159342484992,21.1739093459752,9.26133969729409,8.88253663810146,18.0485232297105,41.6771909370771,30.1524858185059,37.3960528068646,5.08266798103698,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,2.69640099466564,5.37905627450176,55.3702529727271,43.4719121428044,48.5850660721692,15.4251531578054,14.7981922437581,40.4219637409348,40.9260161247869,30.3342199581307,12.1127469099328,13.6625451751151,19.5080297235429,40.7528629086299,42.8162172059277,53.1331637967895,9.49222196604695,15.757353080887,19.5581757154317,22.0971439105251,24.4879290974457,33.7382996943794,5.60373830665562,4.76100828672749,40.2911639295332,11.185510400758,8.15965600449301,11.873470216032,16.2444104361917,24.6414787903535,20.6453297593675,0,0,0,19.4363919291819,0,0,0,14.7213907887626,13.9347926011304,9.60496445528088,27.1757633731363,126.879562987114,15.4379824627418,25.6758283613881,26.1840311348441,26.5207821844467,21.8547828801303,27.3981687626192,13.8233250462643,17.3036477414062,4.19338135067744,22.1152637987469,13.9119490954772,15.0172232553068,14.0613823409214,29.8226817948995,23.4224637609238,23.8769245767339,44.7049846615035,12.3409578241098,7.19883277192089,12.1987417990142,17.3757141709594,36.1425476226715,47.7486538028885,25.8998237086492,32.475863080952,19.3242881440391,22.3892943033506,31.4683634297477,27.8671614166608,16.1742565397552,17.4666740385773,44.2409506073193,38.1637493359565,39.6136685571768,45.5128549863859,46.4008924212056,40.6120493302974,33.3578139432635,30.7857011179429,34.0597428833891,28.5550181053407,25.8648152521005,28.4954452155847,40.8729456361629,33.7804601526502,30.2499740519677,48.7633953705308,9.83098462238529,10.808612098818,11.6507034752193,24.0265896141182,22.5145017581852,30.2504263254505,35.2749656021963,38.7625536542386,34.247299060998,36.7403632705644,29.7783475553577,26.0386713478788,29.6207729844265,23.4759473633106,16.2137619091711,13.5965988305559,10.9775057645525,10.8707199195901,37.2213208958505,63.1834320008806,85.9088835757875,47.601101999438,28.7939138222566,28.7973473106944,18.5569144303814,16.1346819698674,16.9007313322101,16.9300807240178,39.3859121081945,19.5991756121573,22.8715040008245,23.6758201728969,25.3453313254856,50.3338868846364,46.2535426731846,47.3956230345394,23.7084876191352,30.1616073289684,39.4477074855781,29.7330938654159,25.7956807932942,28.405007055579,28.5829147801643,14.9086249459398,13.9728867778824,12.4631135561019,21.6410417773619,17.0182007830416,16.1178375992826,13.0420025183215,16.0259495896917,17.8471098216788,17.569183772918,21.5772103088108,26.9144476446559,22.7885972946108,30.1913233707445,27.1662891798007,32.7639556770289,30.8146231095476,19.9131129009323,16.4030797263545,16.812540305161,29.1816774126547,32.4300303119632,35.4767229270143,33.7953957535443,37.0188828946413,30.2315423925237,21.6598349122157,21.5960147425482,17.9386398615508,21.2074842314458,20.3190510247515,15.1962784041988,15.6220983268033,0,2.17562273527484,5.4094070032094,6.07060841870411,13.1651483789989,13.3621322715112,2.78689407140348,3.53459298086122,6.31016438832513,10.9322848403059,10.9865932843727,5.4962823529087,8.24355094104858,11.0399847007645,6.8817819284732,5.26060544240361,9.09161889277004,59.7657648544561,32.0784592570687,20.4775444217344,29.6454266023508,30.5194727499191,13.2745138339963,23.0641604347232,16.3254720760966,20.5579536933929,12.6979813938732,20.2907197642992,19.6405502807848,26.5379622518579,18.5378636760055,18.962205476149,20.0295356292498,16.5016869197099,17.0219802876894,30.2502637972601,17.0753462593236,25.5061071687595,23.2315706071378,20.334045206636,23.8596079873075,12.178597964584,15.7230044402686,30.9274823461177,8.15955072803359,37.5940656706575,42.788073074415,34.0164896594799,39.2735011770319,40.7069431367752,34.6862195589522,12.6089205367147,30.0732750204221,29.1005483828144,21.1121761201471,18.0833718724503,30.6195070095096,38.2059549254893,19.7174978792872,19.4532518729885,23.0793956253388,29.5947891584685,23.5670315217946,26.6348501936172,25.1652444114797,25.0905955217362,22.2729815021101,22.7920745390347,23.0603141473687,26.9608620243551,36.5514224682856,10.5627683224777,205.184229681045,68.4785780881423,58.0759301504413,61.6410267050631,54.5054455076025,70.9615727061268,81.563280858799,67.966688888542,58.0920768118438,111.370279700789,136.814252972486,57.1980128337003,41.7613943497738,40.6735390372716,42.6140299367168,42.6083535688606,40.7296777301593,43.3905572767088,42.3868942991037,48.9687282248516,52.5826965919499,49.0015259765045,51.0679295076303,51.7619708024972,56.9190513624241,18.5918914564473,12.8751852956958,4.93426211352116,7.05115388729129,11.9777548299958,11.6363134779733,21.0624367907355,23.7948900777763,6.01886524842436,28.8023439734704,29.9211403729665,26.3531936182122,26.8090964456153,17.1270629942661,25.6833925112498,21.6007200074178,22.9663813644352,17.2194115413998,24.3347346523355,43.6944733329384,44.2917609475144,35.8540572083682,36.2229008431758,32.6996533699652,28.6795873182022,30.4478017088213,28.0207677844896,35.3011130550997,32.3452431057661,26.8688057883654,33.1982360839494,27.8115277185551,29.7716958682642,30.7279758912531,29.5302088595506,29.666387441883,29.9009291718743,33.3789579650678,31.500568908761,33.6011867337707,32.8330241394774,32.1888856428883,35.4645256582882,32.1854081020431,35.5381353145041,34.3904589000812,39.7235264271143,32.8645955506986,34.7908208427798,30.6078346760369,31.7184433249314,26.6000178060298,31.1423050783792,32.0224974228695,29.4776481966776,29.241451055676,25.7845264857958,17.7898148824024,9.26483960301965,10.2021847672985
|phase1_expression=39.0763186935697,60.7217209292488,60.5148988388083,131.874396129778,91.1630228502352,27.364321321638,24.9965525437212,52.6823159641631,22.5261955442667,23.6405171585213,6.50628279256919,9.33334260245436,33.8977445263787,49.0428457570575,20.3196954707554,29.9663395736942,10.4934281719222,134.860075690647,154.665081107273,145.141260914926,44.1374675884052,0,0,36.7982572424835,36.0172571275457,35.6023817751313,30.5841017272943,29.3040876452809,37.624637052362,44.6093329675077,28.1597748532237,19.6859508772486,9.84103660135312,15.8481681015439,22.2415747208481,21.942973187321,23.6836453264348,1.67412652294763,2.3440060335714,2.61761871986899,2.35292595212406,6.14740936462601,6.79714494243615,3.27331726736501,4.76471576731718,2.9367480345869,1.56478268869608,10.9012578190223,5.71184075109627,8.1660557611199,10.7789544651529,8.62515386189829,126.843650179649,31.9159342484992,21.1739093459752,9.26133969729409,8.88253663810146,18.0485232297105,41.6771909370771,30.1524858185059,37.3960528068646,5.08266798103698,3.55717918444456,0.899899717281399,0.988866362566974,0.7104801149461,2.69640099466564,5.37905627450176,55.3702529727271,43.4719121428044,48.5850660721692,15.4251531578054,14.7981922437581,40.4219637409348,40.9260161247869,30.3342199581307,12.1127469099328,13.6625451751151,19.5080297235429,40.7528629086299,42.8162172059277,53.1331637967895,9.49222196604695,15.757353080887,19.5581757154317,22.0971439105251,24.4879290974457,33.7382996943794,5.60373830665562,4.76100828672749,40.2911639295332,11.185510400758,8.15965600449301,11.873470216032,16.2444104361917,24.6414787903535,20.6453297593675,0,0,0,19.4363919291819,0,0,0,14.7213907887626,13.9347926011304,9.60496445528088,27.1757633731363,126.879562987114,15.4379824627418,25.6758283613881,26.1840311348441,26.5207821844467,21.8547828801303,27.3981687626192,13.8233250462643,17.3036477414062,4.19338135067744,22.1152637987469,13.9119490954772,15.0172232553068,14.0613823409214,29.8226817948995,23.4224637609238,23.8769245767339,44.7049846615035,12.3409578241098,7.19883277192089,12.1987417990142,17.3757141709594,36.1425476226715,47.7486538028885,25.8998237086492,32.475863080952,19.3242881440391,22.3892943033506,31.4683634297477,27.8671614166608,16.1742565397552,17.4666740385773,44.2409506073193,38.1637493359565,39.6136685571768,45.5128549863859,46.4008924212056,40.6120493302974,33.3578139432635,30.7857011179429,34.0597428833891,28.5550181053407,25.8648152521005,28.4954452155847,40.8729456361629,33.7804601526502,30.2499740519677,48.7633953705308,9.83098462238529,10.808612098818,11.6507034752193,24.0265896141182,22.5145017581852,30.2504263254505,35.2749656021963,38.7625536542386,34.247299060998,36.7403632705644,29.7783475553577,26.0386713478788,29.6207729844265,23.4759473633106,16.2137619091711,13.5965988305559,10.9775057645525,10.8707199195901,37.2213208958505,63.1834320008806,85.9088835757875,47.601101999438,28.7939138222566,28.7973473106944,18.5569144303814,16.1346819698674,16.9007313322101,16.9300807240178,39.3859121081945,19.5991756121573,22.8715040008245,23.6758201728969,25.3453313254856,50.3338868846364,46.2535426731846,47.3956230345394,23.7084876191352,30.1616073289684,39.4477074855781,29.7330938654159,25.7956807932942,28.405007055579,28.5829147801643,14.9086249459398,13.9728867778824,12.4631135561019,21.6410417773619,17.0182007830416,16.1178375992826,13.0420025183215,16.0259495896917,17.8471098216788,17.569183772918,21.5772103088108,26.9144476446559,22.7885972946108,30.1913233707445,27.1662891798007,32.7639556770289,30.8146231095476,19.9131129009323,16.4030797263545,16.812540305161,29.1816774126547,32.4300303119632,35.4767229270143,33.7953957535443,37.0188828946413,30.2315423925237,21.6598349122157,21.5960147425482,17.9386398615508,21.2074842314458,20.3190510247515,15.1962784041988,15.6220983268033,0,2.17562273527484,5.4094070032094,6.07060841870411,13.1651483789989,13.3621322715112,2.78689407140348,3.53459298086122,6.31016438832513,10.9322848403059,10.9865932843727,5.4962823529087,8.24355094104858,11.0399847007645,6.8817819284732,5.26060544240361,9.09161889277004,59.7657648544561,32.0784592570687,20.4775444217344,29.6454266023508,30.5194727499191,13.2745138339963,23.0641604347232,16.3254720760966,20.5579536933929,12.6979813938732,20.2907197642992,19.6405502807848,26.5379622518579,18.5378636760055,18.962205476149,20.0295356292498,16.5016869197099,17.0219802876894,30.2502637972601,17.0753462593236,25.5061071687595,23.2315706071378,20.334045206636,23.8596079873075,12.178597964584,15.7230044402686,30.9274823461177,8.15955072803359,37.5940656706575,42.788073074415,34.0164896594799,39.2735011770319,40.7069431367752,34.6862195589522,12.6089205367147,30.0732750204221,29.1005483828144,21.1121761201471,18.0833718724503,30.6195070095096,38.2059549254893,19.7174978792872,19.4532518729885,23.0793956253388,29.5947891584685,23.5670315217946,26.6348501936172,25.1652444114797,25.0905955217362,22.2729815021101,22.7920745390347,23.0603141473687,26.9608620243551,36.5514224682856,10.5627683224777,205.184229681045,68.4785780881423,58.0759301504413,61.6410267050631,54.5054455076025,70.9615727061268,81.563280858799,67.966688888542,58.0920768118438,111.370279700789,136.814252972486,57.1980128337003,41.7613943497738,40.6735390372716,42.6140299367168,42.6083535688606,40.7296777301593,43.3905572767088,42.3868942991037,48.9687282248516,52.5826965919499,49.0015259765045,51.0679295076303,51.7619708024972,56.9190513624241,18.5918914564473,12.8751852956958,4.93426211352116,7.05115388729129,11.9777548299958,11.6363134779733,21.0624367907355,23.7948900777763,6.01886524842436,28.8023439734704,29.9211403729665,26.3531936182122,26.8090964456153,17.1270629942661,25.6833925112498,21.6007200074178,22.9663813644352,17.2194115413998,24.3347346523355,43.6944733329384,44.2917609475144,35.8540572083682,36.2229008431758,32.6996533699652,28.6795873182022,30.4478017088213,28.0207677844896,35.3011130550997,32.3452431057661,26.8688057883654,33.1982360839494,27.8115277185551,29.7716958682642,30.7279758912531,29.5302088595506,29.666387441883,29.9009291718743,33.3789579650678,31.500568908761,33.6011867337707,32.8330241394774,32.1888856428883,35.4645256582882,32.1854081020431,35.5381353145041,34.3904589000812,39.7235264271143,32.8645955506986,34.7908208427798,30.6078346760369,31.7184433249314,26.6000178060298,31.1423050783792,32.0224974228695,29.4776481966776,29.241451055676,25.7845264857958,17.7898148824024,9.26483960301965,10.2021847672985
|short_description=p1@Ralgps2
}}
}}

Revision as of 06:17, 18 April 2012

Short description:p1@Ralgps2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ralgps2_5end
Coexpression cluster:NA
Association with transcript: 10bp_to_ENSMUST00000027886, ENSMUST00000063199, ENSMUST00000165172, ENSMUST00000172057, NM_001159965, NM_001159967, NM_001159968, NM_023884, NR_027640, uc007dcu.2, uc007dcv.2, uc007dcw.2, uc007dcx.2, uc007dcy.2, uc007dcz.2, uc007ddb.2, uc011wuj.1_5end
EntrezGene:Ralgps2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ralgps2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G739.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I560.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I660.51
CD326+ enterocyte, pool1.CNhs13542.11848-124I3131.87
CD326+ enterocyte, pool2.CNhs13197.11849-124I491.16
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I727.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E952.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E722.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.33
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E433.90
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E849.04
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A120.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2134.86
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4154.67
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6145.14
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A344.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D136.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D236.02
GP2+ M cell, pool1.CNhs13228.11845-124H935.60
GP2+ M cell, pool2.CNhs13231.11846-124I130.58
GP2+ M cell, pool3.CNhs13240.11847-124I229.30
Ileum epithelium, pool1.CNhs13199.10252-104B937.62
Ileum epithelium, pool2.CNhs13232.10253-104C144.61
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C828.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I319.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F522.24
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F723.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H46.80
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D94.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.78
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2126.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.88
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.05
Mouse Granule cells, donor1.CNhs12131.11713-123C341.68
Mouse Granule cells, donor2.CNhs12357.11731-123E330.15
Mouse Granule cells, donor3.CNhs12108.11636-122C737.40
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D555.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F543.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D948.59
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F115.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.80
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D240.42
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F240.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F313.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.51
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D440.75
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F442.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D853.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.10
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.49
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.74
Mouse Schwann, donor1.CNhs12507.11728-123D95.60
Mouse Schwann, donor2.CNhs12573.11746-123F94.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G340.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.87
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.24
Mouse hepatocyte, donor8.CNhs13091.11824-124F624.64
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A720.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G619.44
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.93
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.18
accessory axillary lymph node, adult.CNhs10475.1063-29H9126.88
adrenal gland, adult.CNhs10508.49-24D715.44
adrenal gland, embryo E14.CNhs11038.406-44C525.68
adrenal gland, embryo E16.CNhs11004.1254-43D626.18
adrenal gland, embryo E17.CNhs11043.1263-45I126.52
adrenal gland, embryo E18.CNhs11026.1262-18F521.85
adrenal gland, neonate N00.CNhs11191.1311-23C127.40
adrenal gland, neonate N25.CNhs11223.1377-27I313.82
amnion, adult pregnant day17.5.CNhs10488.583-22A817.30
aorta, adult.CNhs10498.46-23H14.19
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F513.91
bone (os femoris), neonate N16.CNhs11225.1525-43A615.02
bone (os femoris), neonate N20.CNhs11195.1350-25C314.06
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B223.42
cerebellum, neonate N30.CNhs11135.1395-42I223.88
colon, adult.CNhs10468.36-18H744.70
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.34
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.20
corpora quadrigemina, adult.CNhs10501.16-22A417.38
corpus striatum, adult.CNhs10487.19-21D836.14
corpus striatum, neonate N00.CNhs11226.630-43F147.75
cortex, adult.CNhs10473.12-14D525.90
cortex, neonate N30.CNhs11107.1392-42F232.48
diencephalon, adult.CNhs10482.20-12F219.32
diencephalon, neonate N30.CNhs11201.1388-42B222.39
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.47
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.87
epididymis, adult.CNhs10490.58-23B216.17
eyeball, adult.CNhs10484.31-12G417.47
eyeball, embryo E12.CNhs11016.345-16C644.24
eyeball, embryo E14.CNhs10521.399-16E238.16
eyeball, embryo E15.CNhs10593.426-16C939.61
eyeball, embryo E17.CNhs11023.1261-18D445.51
eyeball, neonate N00.CNhs11207.633-15C646.40
eyeball, neonate N01.CNhs11140.1532-43E740.61
eyeball, neonate N02.CNhs11205.1551-44G833.36
eyeball, neonate N16.CNhs11188.777-19A230.79
forelimb, embryo E11.CNhs10596.335-25E234.06
forelimb, embryo E12.CNhs10600.359-14H228.56
forelimb, embryo E13.CNhs10589.384-1E225.86
forelimb, embryo E14.CNhs10577.413-26A828.50
forelimb, embryo E15.CNhs11007.437-20E740.87
forelimb, embryo E17.CNhs10598.1517-43C433.78
forelimb, embryo E18.CNhs11008.1520-43B530.25
gonad, embryo E13.CNhs11044.1564-45I648.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C89.83
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D210.81
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.65
heart, embryo E11.CNhs10586.331-24E924.03
heart, embryo E12.CNhs11015.353-12F522.51
heart, embryo E13.CNhs11013.376-3I930.25
heart, embryo E14.CNhs10597.403-26D435.27
heart, embryo E15.CNhs11017.431-16C838.76
heart, embryo E16.CNhs11021.457-17C634.25
heart, embryo E17.CNhs11025.479-18E536.74
heart, embryo E18.CNhs11030.1283-20G329.78
heart, neonate N00.CNhs11213.639-21E326.04
heart, neonate N03.CNhs11221.1349-25I229.62
heart, neonate N10.CNhs11118.749-24G123.48
heart, neonate N16.CNhs11209.782-15G116.21
heart, neonate N20.CNhs11127.821-26I613.60
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D210.87
hippocampus, adult.CNhs10478.13-16E837.22
hippocampus, neonate N00.CNhs11228.627-43G163.18
intestinal mucosa, adult.CNhs10506.860-29I385.91
intestine, adult.CNhs10496.178-9A347.60
intestine, embryo E12.CNhs11019.1251-16I528.79
intestine, embryo E13.CNhs11010.381-16D528.80
intestine, embryo E15.CNhs10602.976-16D818.56
intestine, embryo E16.CNhs10585.463-22H416.13
intestine, embryo E17.CNhs10582.482-18D316.90
intestine, embryo E18.CNhs10526.1289-20F716.93
intestine, neonate N00.CNhs11126.644-26D139.39
intestine, neonate N01.CNhs11192.1322-23E919.60
intestine, neonate N06.CNhs11102.688-20B822.87
intestine, neonate N07.CNhs11095.720-20F223.68
intestine, neonate N10.CNhs11098.755-23A525.35
intestine, neonate N20.CNhs11187.827-18D150.33
intestine, neonate N25.CNhs11121.1352-25E346.25
intestine, neonate N30.CNhs11131.1384-42G147.40
kidney, embryo E14.CNhs10606.411-4I923.71
kidney, embryo E15.CNhs10997.434-16F830.16
kidney, embryo E16.CNhs10584.464-22A539.45
kidney, embryo E17.CNhs11028.483-18I229.73
kidney, embryo E18.CNhs11001.1288-20C725.80
kidney, neonate N00.CNhs11214.646-21G728.41
kidney, neonate N10.CNhs11206.758-6D528.58
kidney, neonate N20.CNhs11113.832-19I114.91
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H112.46
liver, adult pregnant day01.CNhs10466.508-5B221.64
liver, embryo E12.CNhs10601.355-15F817.02
liver, embryo E13.CNhs10524.378-3H616.12
liver, embryo E14.CNhs10594.409-16E113.04
liver, embryo E15.CNhs10520.433-16D716.03
liver, embryo E16.CNhs10523.462-17F517.85
liver, embryo E17.CNhs10510.481-18A317.57
liver, embryo E18.CNhs10579.499-43G421.58
liver, neonate N00.CNhs11117.641-24F426.91
liver, neonate N03.CNhs11123.1345-25G222.79
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H227.17
liver, neonate N10.CNhs11115.751-24B932.76
liver, neonate N20.CNhs11220.823-25A330.81
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B116.81
lung, embryo E12.CNhs10522.354-16G229.18
lung, embryo E14.CNhs10604.404-26F832.43
lung, embryo E15.CNhs11020.432-17C535.48
lung, embryo E16.CNhs10998.458-17B633.80
lung, embryo E17.CNhs10605.480-44A637.02
lung, embryo E18.CNhs10583.1287-20I630.23
lung, neonate N00.CNhs11224.640-42C621.66
lung, neonate N06.CNhs11212.683-20E521.60
lung, neonate N07.CNhs11111.715-19A317.94
lung, neonate N10.CNhs11219.750-23E621.21
lung, neonate N20.CNhs11109.822-18A420.32
lung, neonate N25.CNhs11119.1359-25C715.20
lung, neonate N30.CNhs11133.1394-42H215.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B65.41
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C213.17
medulla oblongata, neonate N30.CNhs11200.1396-42A313.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E210.93
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.50
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.09
olfactory brain, adult.CNhs10489.18-22I959.77
ovary, adult.CNhs10507.91-2I732.08
ovary, embryo E18.CNhs11040.505-44H720.48
ovary, neonate N00.CNhs11217.1299-22I429.65
oviduct, adult pregnant day01.CNhs10500.988-6G630.52
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F423.06
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E520.56
pancreas, embryo E17.CNhs10599.1558-45G312.70
pancreas, embryo E18.CNhs10580.1535-43I720.29
pancreas, neonate N00.CNhs11105.645-26G919.64
pancreas, neonate N01.CNhs11138.1531-43D726.54
pancreas, neonate N02.CNhs11139.1539-43D818.54
pancreas, neonate N16.CNhs11136.787-43B618.96
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G817.02
pituitary gland, embryo E12.CNhs11018.346-16E630.25
pituitary gland, embryo E13.CNhs11009.370-44C717.08
pituitary gland, embryo E14.CNhs11037.398-44A525.51
pituitary gland, embryo E15.CNhs10592.427-16B923.23
pituitary gland, embryo E16.CNhs11036.449-43F620.33
pituitary gland, embryo E17.CNhs11039.1265-44F523.86
pituitary gland, neonate N00.CNhs11190.1308-22E912.18
placenta, adult pregnant day10.CNhs10472.539-13I715.72
placenta, adult pregnant day17.CNhs10464.577-18G330.93
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C337.59
skin, neonate N00.CNhs11124.650-25G442.79
skin, neonate N03.CNhs11215.662-22H334.02
skin, neonate N06.CNhs11097.693-20I539.27
skin, neonate N10.CNhs11108.762-6C440.71
small intestine, neonate N16.CNhs11114.790-21I134.69
spinal cord, adult.CNhs10505.24-13C912.61
spleen, adult.CNhs10465.25-2G230.07
spleen, embryo E16.CNhs11035.461-43C129.10
spleen, embryo E18.CNhs11011.1271-21F221.11
spleen, neonate N10.CNhs11116.752-24D118.08
spleen, neonate N20.CNhs11112.824-19H130.62
spleen, neonate N25.CNhs11099.1354-25G338.21
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C619.72
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.08
stomach, adult.CNhs10503.33-1H629.59
stomach, embryo E12.CNhs10588.356-43E323.57
stomach, embryo E15.CNhs10603.1252-16G826.63
stomach, embryo E16.CNhs11022.459-17D425.17
stomach, embryo E17.CNhs11006.1035-18D525.09
stomach, embryo E18.CNhs10999.1286-20C622.27
stomach, neonate N03.CNhs11193.1340-24B822.79
stomach, neonate N07.CNhs11210.718-18A923.06
stomach, neonate N25.CNhs11104.1355-25E426.96
stomach, neonate N30.CNhs11134.1386-42I136.55
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G5205.18
testis, embryo E13.CNhs11031.389-23F568.48
testis, embryo E15.CNhs11034.443-27C558.08
testis, embryo E16.CNhs11033.470-26G561.64
testis, embryo E17.CNhs11029.486-18I554.51
testis, embryo E18.CNhs11027.503-18G570.96
testis, neonate N00.CNhs11189.1300-22B781.56
testis, neonate N07.CNhs11222.726-26I467.97
testis, neonate N10.CNhs11204.763-44D958.09
testis, neonate N20.CNhs11110.839-18H3111.37
testis, neonate N30.CNhs11130.1391-42E2136.81
thymus, adult.CNhs10471.38-12B557.20
thymus, embryo E14.CNhs11041.402-44I441.76
thymus, embryo E15.CNhs11005.430-45I240.67
thymus, embryo E16.CNhs11002.456-26C542.61
thymus, embryo E17.CNhs10581.478-18C142.61
thymus, embryo E18.CNhs10595.1273-19G440.73
thymus, neonate N02.CNhs11181.1541-43F843.39
thymus, neonate N03.CNhs11137.2104-43C742.39
thymus, neonate N06.CNhs11197.681-26C448.97
thymus, neonate N07.CNhs11211.713-19D352.58
thymus, neonate N10.CNhs11194.748-24E449.00
thymus, neonate N20.CNhs11186.820-7A251.07
thymus, neonate N25.CNhs11125.1362-25G751.76
thymus, neonate N30.CNhs11132.1393-42G256.92
tongue, adult.CNhs10499.32-1B418.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.05
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F511.64
uterus, adult.CNhs10509.92-27E521.06
vagina, adult.CNhs10502.89-27D523.79
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A128.80
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A229.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.35
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A525.68
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.33
whole body, embryo E11.CNhs11014.324-5I843.69
whole body, embryo E12.CNhs10587.857-27C944.29
whole body, embryo E13.CNhs10512.372-23H235.85
whole body, embryo E14.5.CNhs10578.420-27D236.22
whole body, embryo E14.CNhs10519.395-14B132.70
whole body, embryo E16.CNhs10514.453-14F228.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G528.02
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.30
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G529.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.90
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G533.38
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G533.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G532.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G534.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G539.72
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.86
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G534.79
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G531.14
whole body, embryo E17.5.CNhs10513.490-9F932.02
whole body, embryo E17.CNhs10517.475-3I529.48
whole body, embryo E18.CNhs10516.493-3B329.24
whole body, neonate N00.CNhs10525.657-19C225.78
whole body, neonate N01.CNhs10576.659-23C617.79
whole body, neonate N06.CNhs10515.692-21D19.26
whole body, neonate N10.CNhs10518.761-6B410.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:158869684..158869746,-&oldid=834785"