Personal tools

FFCP PHASE1:Mm9::chr18:11815861..11815995,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr18:11815861..11815995,+
|short_description=p1@Rbbp8
|description=CAGE_peak_1_at_Rbbp8_5end
|association_with_transcript=0bp_to_ENSMUST00000047322,uc008ebn.1,uc008ebo.1,uc012azh.1_5end
|EntrezGene=225182
|EntrezGene=225182
|HGNC=
|HGNC=
|UniProt=E9Q888
|UniProt=E9Q888
|association_with_transcript=0bp_to_ENSMUST00000047322,uc008ebn.1,uc008ebo.1,uc012azh.1_5end
|description=CAGE_peak_1_at_Rbbp8_5end
|id=chr18:11815861..11815995,+
|ontology_enrichment_disease=
|phase1_expression=8.80818659076367,13.9590163055744,15.9249733786338,10.2837831844322,13.023288978605,9.40123922706583,6.30754129607919,2.58246646883153,36.6050677594334,35.577808000943,8.38968044304974,9.57265907944037,4.28001824828014,3.4093956943409,12.3250611871795,20.6524772737622,20.9868563438444,11.5143690355757,11.1062691220648,11.8829102503448,9.18467533631554,9.63122226648587,7.57479388502913,7.1996590257033,5.50582274561208,14.3557991028755,7.75371593086335,6.46413698057667,3.04037471130198,4.78857246543868,6.43018480900384,10.1604907753541,4.92051830067656,0,10.3986583110459,9.97407872150954,10.4126371693808,9.62622750694888,10.1573594788094,15.7057123192139,9.99993529652724,7.5135003345429,13.5942898848723,2.01434908760924,2.93993100536592,2.38610777810186,0,0.872100625521786,1.09843091367236,1.94429899074283,1.39986421625363,1.43752564364972,16.9460432118314,13.0565185562042,14.7881271622684,4.3734104126111,4.01146815914259,6.70373719960675,1.82084814773638,2.11596391708813,2.53532561402472,1.69422266034566,1.77858959222228,4.04954872776629,2.96659908770092,3.5524005747305,0,1.53687322128622,3.31806759387129,2.8351247049655,2.3135745748652,1.71390590642282,1.10434270475807,4.89963196859816,2.97120960156533,2.75765635983006,1.10115880999389,2.29837208553338,2.30409799884365,1.58263545276233,1.37231465403614,3.64639359389732,1.11673199600552,1.68828783009504,2.13917546887534,3.24091444021034,4.12877874317399,3.91438836233131,6.89108359331975,6.72586884950391,21.4499721639242,4.30211938490693,9.51959867190851,4.31762553310254,9.09686984426737,7.6164570806547,3.65155492342555,5.62420064507591,8.3131521472918,6.00677276667578,8.45060518660083,3.84979432242953,10.1922095882658,7.11066703153331,10.1750789275271,15.2015919285059,10.1104889002957,10.9616524530298,19.4203412735379,8.01587550950054,10.5826049327343,10.0473607843007,11.0695438682908,11.3041980414467,13.9930561491489,14.8286577769017,12.3597483867187,6.2177723475562,7.07688441559899,7.92657564742305,8.17113618303456,12.6067565815158,3.72783522436244,1.75668478206928,5.44561437714983,8.68553987709211,26.3593273913025,16.197373736822,20.0770958775442,2.24685959107234,1.37250180845588,5.27748278874031,2.9550134432687,1.79000820131231,2.28566849015516,2.92034273521964,12.220723662038,9.20611582514688,6.06534620240819,2.31486041475121,11.9710807525687,10.3455946995063,9.36323074987816,10.2479276128286,11.6342413548771,9.22418786050918,8.62055865949505,2.06962696591213,7.11374376678379,10.0226222488944,9.14945845652534,6.79506770525482,7.22922847986555,7.3132954969655,6.1734640922383,9.75267907410617,18.9597560574573,13.8967869841946,15.9131559661532,13.4631752148076,7.97388603935727,8.28285482720668,9.46978942340841,11.0187969778546,10.4901636763417,9.06882384526591,10.7309360559848,8.64063533517054,9.70903114489535,7.05920095540109,5.43161023957233,6.72519942156529,6.14740322814942,7.24714661306008,1.05144974282064,5.24813523134351,12.2254949704005,8.72686869989696,10.2378360256912,13.9342003116263,10.1805294444454,10.4875432804138,9.11749979763968,8.56015317506516,5.21981967698963,9.22314146454461,9.29940272560997,11.5394753783867,10.1381325301942,10.7858329038507,11.8875927431082,8.56307474993779,3.22435431620239,10.6251116727048,12.3978509240388,9.16430975303914,8.92181440971078,11.7828177415735,10.813447848248,10.0374900626129,8.79192875911699,9.87177311374404,6.81841042300442,9.84386123724955,10.8107447312262,8.99448449539415,12.5773275260872,8.92355491083942,11.4581633301639,8.34318798607351,11.0251954207024,11.8061407670875,12.9391385874619,6.32639611036456,8.42501717409313,5.55673531483646,7.17589654087649,9.64887042726734,8.31389355749721,10.9905018826881,11.2445833744998,10.3544502322865,11.0304416695596,10.5528942188344,6.18913466303636,16.1960927721973,11.5073655197519,13.9522754478728,14.1914744105164,11.1427054006702,12.0879487306127,10.2700831592873,7.53956419696361,5.98296252200581,4.42587845717133,7.72622889653251,1.60550589987792,3.04750385139728,3.93443868904021,4.54447668967871,6.31016438832513,7.02789739733949,6.03185513651837,9.08081432219698,4.67877215573028,7.35998980050964,6.07216052512342,6.13737301613755,5.13874111330481,3.21321316421807,10.2196861349953,7.30068975035746,14.3340524231147,9.73323725537959,11.9470624505967,7.28341908464944,9.37203026590728,12.6365403436452,6.20133975049623,11.6825356218692,15.247269296925,12.3601468022352,9.26893183800275,12.6414703174326,13.7044191147498,15.470331487228,4.76615448055303,10.0834212657534,2.45781499187234,7.28745919107414,6.56158864476412,8.20496560969525,6.58196082408484,5.78483403317739,12.4376005273766,11.2270997557825,6.61585194164886,8.57408515295696,6.13564821444441,7.41848976616317,8.35606408021955,6.72977688954751,9.03590593552537,2.22510362412612,10.423123728669,10.5257302661243,10.7412825874433,16.0113188453987,16.9500842374071,14.6418030852174,20.9073468892442,23.7917468950219,23.3557955729476,8.59203556213602,11.8625997592926,10.5726122905961,11.9885928312199,8.99079672862215,11.1364907510551,9.30563990055263,9.50514740841363,9.16145796944104,10.4988128366352,10.5627683224777,41.7132774626301,15.6992373346178,10.7548018797113,14.3893879374595,9.29950729039664,12.164841035336,14.5522975920735,15.8849349509619,19.3989787187565,28.9900944991207,33.1234507196545,11.0603892219862,7.70355818102624,8.93585327333997,12.9920822977795,13.4270021750611,15.0997829633761,11.2983722548771,14.0305050815848,12.317906893674,13.86963881121,12.5024469569682,15.3983451568809,13.3734459880058,10.5189211963412,4.98806843953465,6.21560669447381,9.240527230776,5.03653849092235,4.44336066274038,12.0116784288756,11.721703953105,9.86094543763703,5.517293144389,3.3885110557024,1.84130094602871,5.15605962095457,4.46818274093588,2.05524755931193,3.0215755895588,2.70009000092722,4.05289082901798,3.62513927187364,2.5888015587591,13.1809931431904,9.17757208822371,7.68301225893604,9.23805524859517,7.96530017986333,8.27295788025063,6.22290837844523,9.06554251851134,6.73930340142812,5.05394423527595,6.84394109703647,6.79054828989874,7.39767909012071,9.92389862275474,8.78762675020883,7.62069906052918,10.7772423128716,10.4170979050401,9.47797571847605,9.42073088860143,7.20025430009372,10.8260241757196,9.29901140794552,9.88355633099834,7.90518795488777,10.4922113785679,9.14639864363863,9.47050961176234,9.37048385536446,6.73370725989286,8.66035632306471,9.25942134330297,13.0953933814301,12.2400104536913,4.82266527452853,3.2475375131933,6.08222181958062,6.66100267549725,5.92993829413414,5.7353768971074,7.88350641109433
|phase1_expression=8.80818659076367,13.9590163055744,15.9249733786338,10.2837831844322,13.023288978605,9.40123922706583,6.30754129607919,2.58246646883153,36.6050677594334,35.577808000943,8.38968044304974,9.57265907944037,4.28001824828014,3.4093956943409,12.3250611871795,20.6524772737622,20.9868563438444,11.5143690355757,11.1062691220648,11.8829102503448,9.18467533631554,9.63122226648587,7.57479388502913,7.1996590257033,5.50582274561208,14.3557991028755,7.75371593086335,6.46413698057667,3.04037471130198,4.78857246543868,6.43018480900384,10.1604907753541,4.92051830067656,0,10.3986583110459,9.97407872150954,10.4126371693808,9.62622750694888,10.1573594788094,15.7057123192139,9.99993529652724,7.5135003345429,13.5942898848723,2.01434908760924,2.93993100536592,2.38610777810186,0,0.872100625521786,1.09843091367236,1.94429899074283,1.39986421625363,1.43752564364972,16.9460432118314,13.0565185562042,14.7881271622684,4.3734104126111,4.01146815914259,6.70373719960675,1.82084814773638,2.11596391708813,2.53532561402472,1.69422266034566,1.77858959222228,4.04954872776629,2.96659908770092,3.5524005747305,0,1.53687322128622,3.31806759387129,2.8351247049655,2.3135745748652,1.71390590642282,1.10434270475807,4.89963196859816,2.97120960156533,2.75765635983006,1.10115880999389,2.29837208553338,2.30409799884365,1.58263545276233,1.37231465403614,3.64639359389732,1.11673199600552,1.68828783009504,2.13917546887534,3.24091444021034,4.12877874317399,3.91438836233131,6.89108359331975,6.72586884950391,21.4499721639242,4.30211938490693,9.51959867190851,4.31762553310254,9.09686984426737,7.6164570806547,3.65155492342555,5.62420064507591,8.3131521472918,6.00677276667578,8.45060518660083,3.84979432242953,10.1922095882658,7.11066703153331,10.1750789275271,15.2015919285059,10.1104889002957,10.9616524530298,19.4203412735379,8.01587550950054,10.5826049327343,10.0473607843007,11.0695438682908,11.3041980414467,13.9930561491489,14.8286577769017,12.3597483867187,6.2177723475562,7.07688441559899,7.92657564742305,8.17113618303456,12.6067565815158,3.72783522436244,1.75668478206928,5.44561437714983,8.68553987709211,26.3593273913025,16.197373736822,20.0770958775442,2.24685959107234,1.37250180845588,5.27748278874031,2.9550134432687,1.79000820131231,2.28566849015516,2.92034273521964,12.220723662038,9.20611582514688,6.06534620240819,2.31486041475121,11.9710807525687,10.3455946995063,9.36323074987816,10.2479276128286,11.6342413548771,9.22418786050918,8.62055865949505,2.06962696591213,7.11374376678379,10.0226222488944,9.14945845652534,6.79506770525482,7.22922847986555,7.3132954969655,6.1734640922383,9.75267907410617,18.9597560574573,13.8967869841946,15.9131559661532,13.4631752148076,7.97388603935727,8.28285482720668,9.46978942340841,11.0187969778546,10.4901636763417,9.06882384526591,10.7309360559848,8.64063533517054,9.70903114489535,7.05920095540109,5.43161023957233,6.72519942156529,6.14740322814942,7.24714661306008,1.05144974282064,5.24813523134351,12.2254949704005,8.72686869989696,10.2378360256912,13.9342003116263,10.1805294444454,10.4875432804138,9.11749979763968,8.56015317506516,5.21981967698963,9.22314146454461,9.29940272560997,11.5394753783867,10.1381325301942,10.7858329038507,11.8875927431082,8.56307474993779,3.22435431620239,10.6251116727048,12.3978509240388,9.16430975303914,8.92181440971078,11.7828177415735,10.813447848248,10.0374900626129,8.79192875911699,9.87177311374404,6.81841042300442,9.84386123724955,10.8107447312262,8.99448449539415,12.5773275260872,8.92355491083942,11.4581633301639,8.34318798607351,11.0251954207024,11.8061407670875,12.9391385874619,6.32639611036456,8.42501717409313,5.55673531483646,7.17589654087649,9.64887042726734,8.31389355749721,10.9905018826881,11.2445833744998,10.3544502322865,11.0304416695596,10.5528942188344,6.18913466303636,16.1960927721973,11.5073655197519,13.9522754478728,14.1914744105164,11.1427054006702,12.0879487306127,10.2700831592873,7.53956419696361,5.98296252200581,4.42587845717133,7.72622889653251,1.60550589987792,3.04750385139728,3.93443868904021,4.54447668967871,6.31016438832513,7.02789739733949,6.03185513651837,9.08081432219698,4.67877215573028,7.35998980050964,6.07216052512342,6.13737301613755,5.13874111330481,3.21321316421807,10.2196861349953,7.30068975035746,14.3340524231147,9.73323725537959,11.9470624505967,7.28341908464944,9.37203026590728,12.6365403436452,6.20133975049623,11.6825356218692,15.247269296925,12.3601468022352,9.26893183800275,12.6414703174326,13.7044191147498,15.470331487228,4.76615448055303,10.0834212657534,2.45781499187234,7.28745919107414,6.56158864476412,8.20496560969525,6.58196082408484,5.78483403317739,12.4376005273766,11.2270997557825,6.61585194164886,8.57408515295696,6.13564821444441,7.41848976616317,8.35606408021955,6.72977688954751,9.03590593552537,2.22510362412612,10.423123728669,10.5257302661243,10.7412825874433,16.0113188453987,16.9500842374071,14.6418030852174,20.9073468892442,23.7917468950219,23.3557955729476,8.59203556213602,11.8625997592926,10.5726122905961,11.9885928312199,8.99079672862215,11.1364907510551,9.30563990055263,9.50514740841363,9.16145796944104,10.4988128366352,10.5627683224777,41.7132774626301,15.6992373346178,10.7548018797113,14.3893879374595,9.29950729039664,12.164841035336,14.5522975920735,15.8849349509619,19.3989787187565,28.9900944991207,33.1234507196545,11.0603892219862,7.70355818102624,8.93585327333997,12.9920822977795,13.4270021750611,15.0997829633761,11.2983722548771,14.0305050815848,12.317906893674,13.86963881121,12.5024469569682,15.3983451568809,13.3734459880058,10.5189211963412,4.98806843953465,6.21560669447381,9.240527230776,5.03653849092235,4.44336066274038,12.0116784288756,11.721703953105,9.86094543763703,5.517293144389,3.3885110557024,1.84130094602871,5.15605962095457,4.46818274093588,2.05524755931193,3.0215755895588,2.70009000092722,4.05289082901798,3.62513927187364,2.5888015587591,13.1809931431904,9.17757208822371,7.68301225893604,9.23805524859517,7.96530017986333,8.27295788025063,6.22290837844523,9.06554251851134,6.73930340142812,5.05394423527595,6.84394109703647,6.79054828989874,7.39767909012071,9.92389862275474,8.78762675020883,7.62069906052918,10.7772423128716,10.4170979050401,9.47797571847605,9.42073088860143,7.20025430009372,10.8260241757196,9.29901140794552,9.88355633099834,7.90518795488777,10.4922113785679,9.14639864363863,9.47050961176234,9.37048385536446,6.73370725989286,8.66035632306471,9.25942134330297,13.0953933814301,12.2400104536913,4.82266527452853,3.2475375131933,6.08222181958062,6.66100267549725,5.92993829413414,5.7353768971074,7.88350641109433
|short_description=p1@Rbbp8
}}
}}

Revision as of 02:58, 18 April 2012

Short description:p1@Rbbp8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rbbp8_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000047322, uc008ebn.1, uc008ebo.1, uc012azh.1_5end
EntrezGene:Rbbp8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rbbp8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.81
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.28
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.40
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.31
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.58
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E736.61
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F235.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.39
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.57
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A320.65
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.51
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.51
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I17.75
GP2+ M cell, pool3.CNhs13240.11847-124I26.46
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G89.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.10
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.95
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.70
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.14
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.91
Mouse Schwann, donor1.CNhs12507.11728-123D96.89
Mouse Schwann, donor2.CNhs12573.11746-123F96.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C49.52
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.62
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.01
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.45
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G110.18
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.96
accessory axillary lymph node, adult.CNhs10475.1063-29H919.42
adrenal gland, adult.CNhs10508.49-24D78.02
adrenal gland, embryo E14.CNhs11038.406-44C510.58
adrenal gland, embryo E16.CNhs11004.1254-43D610.05
adrenal gland, embryo E17.CNhs11043.1263-45I111.07
adrenal gland, embryo E18.CNhs11026.1262-18F511.30
adrenal gland, neonate N00.CNhs11191.1311-23C113.99
adrenal gland, neonate N25.CNhs11223.1377-27I314.83
amnion, adult pregnant day17.5.CNhs10488.583-22A812.36
aorta, adult.CNhs10498.46-23H16.22
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F57.93
bone (os femoris), neonate N16.CNhs11225.1525-43A68.17
bone (os femoris), neonate N20.CNhs11195.1350-25C312.61
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H78.69
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C726.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D420.08
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F15.28
cortex, adult.CNhs10473.12-14D52.96
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B112.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.21
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C611.97
eyeball, embryo E14.CNhs10521.399-16E210.35
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D410.25
eyeball, neonate N00.CNhs11207.633-15C611.63
eyeball, neonate N01.CNhs11140.1532-43E79.22
eyeball, neonate N02.CNhs11205.1551-44G88.62
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H210.02
forelimb, embryo E13.CNhs10589.384-1E29.15
forelimb, embryo E14.CNhs10577.413-26A86.80
forelimb, embryo E15.CNhs11007.437-20E77.23
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B56.17
gonad, embryo E13.CNhs11044.1564-45I69.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.96
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.91
heart, embryo E11.CNhs10586.331-24E913.46
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D49.47
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C610.49
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G310.73
heart, neonate N00.CNhs11213.639-21E38.64
heart, neonate N03.CNhs11221.1349-25I29.71
heart, neonate N10.CNhs11118.749-24G17.06
heart, neonate N16.CNhs11209.782-15G15.43
heart, neonate N20.CNhs11127.821-26I66.73
heart, neonate N25.CNhs11196.1351-25D36.15
heart, neonate N30.CNhs11202.1390-42D27.25
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G15.25
intestinal mucosa, adult.CNhs10506.860-29I312.23
intestine, adult.CNhs10496.178-9A38.73
intestine, embryo E12.CNhs11019.1251-16I510.24
intestine, embryo E13.CNhs11010.381-16D513.93
intestine, embryo E15.CNhs10602.976-16D810.18
intestine, embryo E16.CNhs10585.463-22H410.49
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E99.22
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F211.54
intestine, neonate N10.CNhs11098.755-23A510.14
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E311.89
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F810.63
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I29.16
kidney, embryo E18.CNhs11001.1288-20C78.92
kidney, neonate N00.CNhs11214.646-21G711.78
kidney, neonate N10.CNhs11206.758-6D510.81
kidney, neonate N20.CNhs11113.832-19I110.04
kidney, neonate N25.CNhs11122.1353-25F38.79
kidney, neonate N30.CNhs11203.1385-42H19.87
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F89.84
liver, embryo E13.CNhs10524.378-3H610.81
liver, embryo E14.CNhs10594.409-16E18.99
liver, embryo E15.CNhs10520.433-16D712.58
liver, embryo E16.CNhs10523.462-17F58.92
liver, embryo E17.CNhs10510.481-18A311.46
liver, embryo E18.CNhs10579.499-43G48.34
liver, neonate N00.CNhs11117.641-24F411.03
liver, neonate N03.CNhs11123.1345-25G211.81
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B98.43
liver, neonate N20.CNhs11220.823-25A35.56
liver, neonate N25.CNhs11198.1368-26H17.18
liver, neonate N30.CNhs11106.1382-42D19.65
lung, adult.CNhs10474.28-22B18.31
lung, embryo E12.CNhs10522.354-16G210.99
lung, embryo E14.CNhs10604.404-26F811.24
lung, embryo E15.CNhs11020.432-17C510.35
lung, embryo E16.CNhs10998.458-17B611.03
lung, embryo E17.CNhs10605.480-44A610.55
lung, embryo E18.CNhs10583.1287-20I66.19
lung, neonate N00.CNhs11224.640-42C616.20
lung, neonate N06.CNhs11212.683-20E511.51
lung, neonate N07.CNhs11111.715-19A313.95
lung, neonate N10.CNhs11219.750-23E614.19
lung, neonate N20.CNhs11109.822-18A411.14
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H210.27
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.93
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E16.31
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D79.08
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.68
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.36
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D56.14
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I710.22
ovary, embryo E18.CNhs11040.505-44H77.30
ovary, neonate N00.CNhs11217.1299-22I414.33
oviduct, adult pregnant day01.CNhs10500.988-6G69.73
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G36.20
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D712.36
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B612.64
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H515.47
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E610.08
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B96.56
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F56.58
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I712.44
placenta, adult pregnant day17.CNhs10464.577-18G311.23
prostate, adult.CNhs10470.859-1F86.62
skin, adult.CNhs10492.30-1C38.57
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H37.42
skin, neonate N06.CNhs11097.693-20I58.36
skin, neonate N10.CNhs11108.762-6C46.73
small intestine, neonate N16.CNhs11114.790-21I19.04
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G210.42
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D116.01
spleen, neonate N20.CNhs11112.824-19H116.95
spleen, neonate N25.CNhs11099.1354-25G314.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C620.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.36
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E311.86
stomach, embryo E15.CNhs10603.1252-16G810.57
stomach, embryo E16.CNhs11022.459-17D411.99
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C611.14
stomach, neonate N03.CNhs11193.1340-24B89.31
stomach, neonate N07.CNhs11210.718-18A99.51
stomach, neonate N25.CNhs11104.1355-25E49.16
stomach, neonate N30.CNhs11134.1386-42I110.50
submandibular gland, adult.CNhs10469.59-29C110.56
testis, adult.CNhs10504.57-7G541.71
testis, embryo E13.CNhs11031.389-23F515.70
testis, embryo E15.CNhs11034.443-27C510.75
testis, embryo E16.CNhs11033.470-26G514.39
testis, embryo E17.CNhs11029.486-18I59.30
testis, embryo E18.CNhs11027.503-18G512.16
testis, neonate N00.CNhs11189.1300-22B714.55
testis, neonate N07.CNhs11222.726-26I415.88
testis, neonate N10.CNhs11204.763-44D919.40
testis, neonate N20.CNhs11110.839-18H328.99
testis, neonate N30.CNhs11130.1391-42E233.12
thymus, adult.CNhs10471.38-12B511.06
thymus, embryo E14.CNhs11041.402-44I47.70
thymus, embryo E15.CNhs11005.430-45I28.94
thymus, embryo E16.CNhs11002.456-26C512.99
thymus, embryo E17.CNhs10581.478-18C113.43
thymus, embryo E18.CNhs10595.1273-19G415.10
thymus, neonate N02.CNhs11181.1541-43F811.30
thymus, neonate N03.CNhs11137.2104-43C714.03
thymus, neonate N06.CNhs11197.681-26C412.32
thymus, neonate N07.CNhs11211.713-19D313.87
thymus, neonate N10.CNhs11194.748-24E412.50
thymus, neonate N20.CNhs11186.820-7A215.40
thymus, neonate N25.CNhs11125.1362-25G713.37
thymus, neonate N30.CNhs11132.1393-42G210.52
tongue, adult.CNhs10499.32-1B44.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E44.44
uterus, adult pregnant day19.CNhs10497.590-15F512.01
uterus, adult.CNhs10509.92-27E511.72
vagina, adult.CNhs10502.89-27D59.86
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.47
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I813.18
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H27.68
whole body, embryo E14.5.CNhs10578.420-27D29.24
whole body, embryo E14.CNhs10519.395-14B17.97
whole body, embryo E16.CNhs10514.453-14F28.27
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.92
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.20
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.91
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.49
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.15
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.37
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.24
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D15.74
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:11815861..11815995,%2B&oldid=810193"