Personal tools

FFCP PHASE1:Mm9::chr17:8503966..8504033,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr17:8503966..8504033,+
|short_description=p1@Sft2d1
|description=CAGE_peak_1_at_Sft2d1_5end
|association_with_transcript=0bp_to_ENSMUST00000130782,ENSMUST00000135627,ENSMUST00000140890,ENSMUST00000145276,ENSMUST00000150728,ENSMUST00000154553,NM_134114,uc008ajl.1,uc008ajm.1,uc008ajn.1_5end
|EntrezGene=106489
|EntrezGene=106489
|HGNC=
|HGNC=
|UniProt=D6RFQ7,Q5SSN7,A0A4V6
|UniProt=D6RFQ7,Q5SSN7,A0A4V6
|association_with_transcript=0bp_to_ENSMUST00000130782,ENSMUST00000135627,ENSMUST00000140890,ENSMUST00000145276,ENSMUST00000150728,ENSMUST00000154553,NM_134114,uc008ajl.1,uc008ajm.1,uc008ajn.1_5end
|description=CAGE_peak_1_at_Sft2d1_5end
|id=chr17:8503966..8504033,+
|ontology_enrichment_disease=
|phase1_expression=6.88640042550614,11.8651638597383,13.6499771816861,12.7034968748869,19.5349334679075,10.2406355866253,12.8486952327539,12.9123323441576,19.5696323790817,16.1504523162175,25.8539132020513,19.5441789538574,20.8864890516071,17.3092396789615,13.3243904726265,15.1856450542369,13.2916756844348,27.6029394688458,23.0352248457641,30.1316652776601,9.60989178707088,9.82980416888764,12.7987896678078,15.0392877425802,18.1233332043064,19.5238867799107,18.5227658348402,14.0056301245828,18.812318526181,17.8941392129551,16.4080577884925,5.08024538767705,3.69038872550742,0,21.086168241843,13.2987716286794,21.6419517638111,61.9426813490623,77.3521991078562,58.1111355810916,81.764176836311,82.6485036799719,77.1961461319534,6.16894408080329,7.50189291024408,8.81024410376071,18.7773922643529,10.4652075062614,11.2039953194581,15.1655321277941,13.8586557409109,7.18762821824858,28.6908256358729,23.211588544363,13.1076581665561,12.8629718017974,11.1748041576115,11.8604581223812,11.5320382689971,14.2827564403449,12.0427966666174,18.2976047317331,16.0073063300005,65.2427295029014,57.3542490288845,48.3126478163348,26.9640099466564,26.5110630671873,10.2652716185393,13.9056116481641,10.5162480675691,11.4260393761521,13.9147180799517,9.0643191419066,13.5142114135713,11.0306254393203,15.4162233399144,16.0886045987337,8.44835932909339,11.7378796079873,15.0954611943976,14.5855743755893,10.8881369610539,23.6360296213306,20.4749652020926,10.0173719061047,12.6710795911202,12.4887628702951,19.5373578799615,10.5044468548432,6.66688324013859,25.8127163094416,13.599426674155,6.47643829965381,20.7928453583254,23.7454250161588,7.3031098468511,6.98764322570037,16.3665182899807,8.48014978824817,8.87313544593087,7.69958864485907,12.7402619853323,7.11066703153331,24.6799786752784,23.3091076237091,23.25412447068,10.2765491747154,13.7237078333001,9.05497048295431,6.41895709034703,3.65358573974569,6.91846491768175,11.7563659631046,8.34879820663504,11.6869929936598,15.3260879995312,7.80836527367523,15.9229899350977,7.117741397686,9.93786833071771,13.091631834651,18.6391761218122,13.1751358655196,13.6140359428746,22.7356779135646,10.6635460810269,34.1944556666242,11.690460890722,9.8861822007183,15.5550204958333,15.9581027183338,11.4724051326902,15.3429274398198,13.714010940931,17.8465389374533,9.980257657331,10.698999472468,12.6361379216837,19.5710925974421,5.72529949035896,9.88579049063934,5.04173963454978,7.83665052745718,6.87168641428411,4.09963904911519,9.37017245597288,8.53721123438752,3.66465587985832,6.80781888604149,7.74184946321375,4.16471891612392,6.39508673218875,6.96504333044333,6.58502836505419,7.76233640592123,18.2575428701441,17.4996576838006,14.4923384691752,7.45652781127807,6.56672967947069,9.7233513188948,5.44512891845984,7.67380503814875,9.2560267732427,8.37122201101468,8.58474884478781,8.17357396570186,7.24063339619314,8.04420573987567,5.83695428730161,9.9415991449226,7.68425403518677,8.32079796314305,10.9350773253346,12.3485534855141,33.7027158643474,17.982638533121,6.61193576659225,7.89604684325491,6.18563814346048,11.6976444281539,13.787438718382,17.1203063501303,22.302865892592,16.1404975629531,21.3634927480229,15.3196483471686,17.9366960149591,22.4704852163555,19.0201483889731,21.1089749649629,4.74169752382704,8.11164439529075,4.50830942692322,5.7022371796688,8.33995694820791,7.85521182771568,9.10606134589305,8.56138858281692,14.1298855057237,14.0672766870853,20.1587786419261,8.3422552858047,8.25547779475453,9.89393294493356,9.33156558387113,10.8529721888588,12.4766667372896,11.7955416354832,8.10676133875177,18.3956146836015,20.1275489138296,13.3970741160661,18.4102227137591,22.2269412593458,17.5809465251474,18.332853811808,11.6394509804961,7.01118223550794,5.0519142697028,5.94107800213158,7.74477819352057,7.70528784232352,14.0445748122748,8.97614780145875,9.61574379047765,6.64394068946325,8.92946704481928,16.5501947862895,15.7143333497965,12.150520920847,13.5712155545345,21.7562273527484,14.7529281905711,9.3818493743609,16.0550589987792,15.3547309435786,11.3115112309906,3.53459298086122,5.36363973007636,8.98009111882268,3.44677436372478,4.30143836314594,5.34716817797746,4.81230102341015,5.26253912177363,4.38383786866968,1.58115111178609,12.2102100240287,9.79386587937053,8.369083372361,7.98146100832523,10.2281476242972,13.2745138339963,5.09839335925461,7.86041248108353,9.9960692270626,10.9261700365886,12.912276213645,11.62927319257,8.72480950746013,10.3384239731569,8.53299246426703,14.7586052004998,13.4076206222643,7.14923172082955,6.30213829109586,6.20921682157222,8.57348140126369,6.0295679438373,8.38333442729732,7.0756078858912,6.08929898229199,10.560226862867,19.7003825903353,24.9197089802107,8.73897140589844,7.58882805470756,7.59942854094764,7.75920236020387,8.37118588699812,14.5740418314925,16.1320012749143,11.9609616558497,7.01715351074956,8.70414278637645,12.2439497053049,7.38148829693536,18.7598102029349,6.11922347977879,7.55737842547753,8.84479832348312,18.1387417422872,4.4287039101359,5.28630614529807,7.56037385752609,9.82714991268003,12.0099410060398,11.4634694427098,13.8031271061311,21.2022313007064,24.7564598987324,17.3975007664339,9.58277995763124,3.28936401296753,5.95650565645551,6.61134040369762,5.42471258606471,7.43406952159424,6.10257640957921,5.33837977860195,7.34015410979976,16.1861360953424,10.0810502190253,12.0084225838708,5.0681303822541,7.49789987303239,7.27556608675652,8.77230808770659,10.530111803407,11.7791540529569,11.519783119617,10.2985778947111,11.73584822487,11.6958374758735,11.2076562850715,14.5279880876897,16.3627663054197,7.70883304291719,4.66170502085536,7.62567781180543,7.38692312001945,14.2960299583821,13.1377732815827,11.1722490803032,13.076471123823,20.5644562654499,9.03602948187307,10.5874804396651,9.16632821503035,10.3111909406213,11.6464028361009,15.8632718451837,18.2256075062588,11.2580300806055,12.2348450425735,12.4262474820437,2.07574695168353,5.1873233542134,8.02447947044431,8.50873509739029,4.61148957781561,7.16989682955055,7.77863547305653,8.24140228955577,6.09746498224449,9.34979683526051,8.36481689637791,9.99719609346204,9.92599979180754,9.09157164149144,9.5342878466318,7.1444053692461,8.69132444586416,10.4170979050401,10.714233420886,9.27353196846703,8.57173130963539,9.05126611412621,10.7296285476294,9.30217066446903,9.2227192807024,8.630690004951,8.41468675214754,8.15516105457313,10.3211126522855,5.61142271657738,9.84670650430645,9.75194375518078,12.2769312950907,11.3103894065755,8.8737041051325,4.99621155875892,7.25187986180766,5.80151845930405,6.50380329034067,10.8089795368563,7.88350641109433
|phase1_expression=6.88640042550614,11.8651638597383,13.6499771816861,12.7034968748869,19.5349334679075,10.2406355866253,12.8486952327539,12.9123323441576,19.5696323790817,16.1504523162175,25.8539132020513,19.5441789538574,20.8864890516071,17.3092396789615,13.3243904726265,15.1856450542369,13.2916756844348,27.6029394688458,23.0352248457641,30.1316652776601,9.60989178707088,9.82980416888764,12.7987896678078,15.0392877425802,18.1233332043064,19.5238867799107,18.5227658348402,14.0056301245828,18.812318526181,17.8941392129551,16.4080577884925,5.08024538767705,3.69038872550742,0,21.086168241843,13.2987716286794,21.6419517638111,61.9426813490623,77.3521991078562,58.1111355810916,81.764176836311,82.6485036799719,77.1961461319534,6.16894408080329,7.50189291024408,8.81024410376071,18.7773922643529,10.4652075062614,11.2039953194581,15.1655321277941,13.8586557409109,7.18762821824858,28.6908256358729,23.211588544363,13.1076581665561,12.8629718017974,11.1748041576115,11.8604581223812,11.5320382689971,14.2827564403449,12.0427966666174,18.2976047317331,16.0073063300005,65.2427295029014,57.3542490288845,48.3126478163348,26.9640099466564,26.5110630671873,10.2652716185393,13.9056116481641,10.5162480675691,11.4260393761521,13.9147180799517,9.0643191419066,13.5142114135713,11.0306254393203,15.4162233399144,16.0886045987337,8.44835932909339,11.7378796079873,15.0954611943976,14.5855743755893,10.8881369610539,23.6360296213306,20.4749652020926,10.0173719061047,12.6710795911202,12.4887628702951,19.5373578799615,10.5044468548432,6.66688324013859,25.8127163094416,13.599426674155,6.47643829965381,20.7928453583254,23.7454250161588,7.3031098468511,6.98764322570037,16.3665182899807,8.48014978824817,8.87313544593087,7.69958864485907,12.7402619853323,7.11066703153331,24.6799786752784,23.3091076237091,23.25412447068,10.2765491747154,13.7237078333001,9.05497048295431,6.41895709034703,3.65358573974569,6.91846491768175,11.7563659631046,8.34879820663504,11.6869929936598,15.3260879995312,7.80836527367523,15.9229899350977,7.117741397686,9.93786833071771,13.091631834651,18.6391761218122,13.1751358655196,13.6140359428746,22.7356779135646,10.6635460810269,34.1944556666242,11.690460890722,9.8861822007183,15.5550204958333,15.9581027183338,11.4724051326902,15.3429274398198,13.714010940931,17.8465389374533,9.980257657331,10.698999472468,12.6361379216837,19.5710925974421,5.72529949035896,9.88579049063934,5.04173963454978,7.83665052745718,6.87168641428411,4.09963904911519,9.37017245597288,8.53721123438752,3.66465587985832,6.80781888604149,7.74184946321375,4.16471891612392,6.39508673218875,6.96504333044333,6.58502836505419,7.76233640592123,18.2575428701441,17.4996576838006,14.4923384691752,7.45652781127807,6.56672967947069,9.7233513188948,5.44512891845984,7.67380503814875,9.2560267732427,8.37122201101468,8.58474884478781,8.17357396570186,7.24063339619314,8.04420573987567,5.83695428730161,9.9415991449226,7.68425403518677,8.32079796314305,10.9350773253346,12.3485534855141,33.7027158643474,17.982638533121,6.61193576659225,7.89604684325491,6.18563814346048,11.6976444281539,13.787438718382,17.1203063501303,22.302865892592,16.1404975629531,21.3634927480229,15.3196483471686,17.9366960149591,22.4704852163555,19.0201483889731,21.1089749649629,4.74169752382704,8.11164439529075,4.50830942692322,5.7022371796688,8.33995694820791,7.85521182771568,9.10606134589305,8.56138858281692,14.1298855057237,14.0672766870853,20.1587786419261,8.3422552858047,8.25547779475453,9.89393294493356,9.33156558387113,10.8529721888588,12.4766667372896,11.7955416354832,8.10676133875177,18.3956146836015,20.1275489138296,13.3970741160661,18.4102227137591,22.2269412593458,17.5809465251474,18.332853811808,11.6394509804961,7.01118223550794,5.0519142697028,5.94107800213158,7.74477819352057,7.70528784232352,14.0445748122748,8.97614780145875,9.61574379047765,6.64394068946325,8.92946704481928,16.5501947862895,15.7143333497965,12.150520920847,13.5712155545345,21.7562273527484,14.7529281905711,9.3818493743609,16.0550589987792,15.3547309435786,11.3115112309906,3.53459298086122,5.36363973007636,8.98009111882268,3.44677436372478,4.30143836314594,5.34716817797746,4.81230102341015,5.26253912177363,4.38383786866968,1.58115111178609,12.2102100240287,9.79386587937053,8.369083372361,7.98146100832523,10.2281476242972,13.2745138339963,5.09839335925461,7.86041248108353,9.9960692270626,10.9261700365886,12.912276213645,11.62927319257,8.72480950746013,10.3384239731569,8.53299246426703,14.7586052004998,13.4076206222643,7.14923172082955,6.30213829109586,6.20921682157222,8.57348140126369,6.0295679438373,8.38333442729732,7.0756078858912,6.08929898229199,10.560226862867,19.7003825903353,24.9197089802107,8.73897140589844,7.58882805470756,7.59942854094764,7.75920236020387,8.37118588699812,14.5740418314925,16.1320012749143,11.9609616558497,7.01715351074956,8.70414278637645,12.2439497053049,7.38148829693536,18.7598102029349,6.11922347977879,7.55737842547753,8.84479832348312,18.1387417422872,4.4287039101359,5.28630614529807,7.56037385752609,9.82714991268003,12.0099410060398,11.4634694427098,13.8031271061311,21.2022313007064,24.7564598987324,17.3975007664339,9.58277995763124,3.28936401296753,5.95650565645551,6.61134040369762,5.42471258606471,7.43406952159424,6.10257640957921,5.33837977860195,7.34015410979976,16.1861360953424,10.0810502190253,12.0084225838708,5.0681303822541,7.49789987303239,7.27556608675652,8.77230808770659,10.530111803407,11.7791540529569,11.519783119617,10.2985778947111,11.73584822487,11.6958374758735,11.2076562850715,14.5279880876897,16.3627663054197,7.70883304291719,4.66170502085536,7.62567781180543,7.38692312001945,14.2960299583821,13.1377732815827,11.1722490803032,13.076471123823,20.5644562654499,9.03602948187307,10.5874804396651,9.16632821503035,10.3111909406213,11.6464028361009,15.8632718451837,18.2256075062588,11.2580300806055,12.2348450425735,12.4262474820437,2.07574695168353,5.1873233542134,8.02447947044431,8.50873509739029,4.61148957781561,7.16989682955055,7.77863547305653,8.24140228955577,6.09746498224449,9.34979683526051,8.36481689637791,9.99719609346204,9.92599979180754,9.09157164149144,9.5342878466318,7.1444053692461,8.69132444586416,10.4170979050401,10.714233420886,9.27353196846703,8.57173130963539,9.05126611412621,10.7296285476294,9.30217066446903,9.2227192807024,8.630690004951,8.41468675214754,8.15516105457313,10.3211126522855,5.61142271657738,9.84670650430645,9.75194375518078,12.2769312950907,11.3103894065755,8.8737041051325,4.99621155875892,7.25187986180766,5.80151845930405,6.50380329034067,10.8089795368563,7.88350641109433
|short_description=p1@Sft2d1
}}
}}

Revision as of 02:49, 18 April 2012

Short description:p1@Sft2d1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sft2d1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000130782, ENSMUST00000135627, ENSMUST00000140890, ENSMUST00000145276, ENSMUST00000150728, ENSMUST00000154553, NM_134114, uc008ajl.1, uc008ajm.1, uc008ajn.1_5end
EntrezGene:Sft2d1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sft2d1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I511.87
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I312.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I419.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.24
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I812.85
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.15
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E625.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.54
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E420.89
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.19
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A227.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.04
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A630.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.80
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.04
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.12
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I118.52
GP2+ M cell, pool3.CNhs13240.11847-124I214.01
Ileum epithelium, pool1.CNhs13199.10252-104B918.81
Ileum epithelium, pool2.CNhs13232.10253-104C117.89
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.41
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F521.09
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F613.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.64
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G861.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H177.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H358.11
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G981.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H282.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H477.20
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.47
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B811.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C315.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.86
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A228.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C311.53
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.30
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.01
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C765.24
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E757.35
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D248.31
Mouse Microglia, donor1.CNhs12629.11718-123C826.96
Mouse Microglia, donor2.CNhs12634.11736-123E826.51
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F513.91
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D513.91
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F213.51
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.59
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.89
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.47
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.49
Mouse Schwann, donor1.CNhs12507.11728-123D919.54
Mouse Schwann, donor2.CNhs12573.11746-123F910.50
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F725.81
Mouse hepatocyte, donor1.CNhs13078.11714-123C413.60
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F420.79
Mouse hepatocyte, donor8.CNhs13091.11824-124F623.75
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E316.37
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.48
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G223.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G323.25
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B610.28
accessory axillary lymph node, adult.CNhs10475.1063-29H913.72
adrenal gland, adult.CNhs10508.49-24D79.05
adrenal gland, embryo E14.CNhs11038.406-44C56.42
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F511.76
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I311.69
amnion, adult pregnant day17.5.CNhs10488.583-22A815.33
aorta, adult.CNhs10498.46-23H17.81
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F57.12
bone (os femoris), neonate N16.CNhs11225.1525-43A69.94
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H418.64
cerebellum, adult.CNhs10494.15-8B213.18
cerebellum, neonate N30.CNhs11135.1395-42I213.61
colon, adult.CNhs10468.36-18H722.74
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.66
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D134.19
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.69
corpora quadrigemina, adult.CNhs10501.16-22A49.89
corpus striatum, adult.CNhs10487.19-21D815.56
corpus striatum, neonate N00.CNhs11226.630-43F115.96
cortex, adult.CNhs10473.12-14D511.47
cortex, neonate N30.CNhs11107.1392-42F215.34
diencephalon, adult.CNhs10482.20-12F213.71
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.98
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.70
epididymis, adult.CNhs10490.58-23B212.64
eyeball, adult.CNhs10484.31-12G419.57
eyeball, embryo E12.CNhs11016.345-16C65.73
eyeball, embryo E14.CNhs10521.399-16E29.89
eyeball, embryo E15.CNhs10593.426-16C95.04
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C66.87
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G89.37
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E23.66
forelimb, embryo E12.CNhs10600.359-14H26.81
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A84.16
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C46.97
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C818.26
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D217.50
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.49
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F56.57
heart, embryo E13.CNhs11013.376-3I99.72
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C69.26
heart, embryo E17.CNhs11025.479-18E58.37
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E38.17
heart, neonate N03.CNhs11221.1349-25I27.24
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G15.84
heart, neonate N20.CNhs11127.821-26I69.94
heart, neonate N25.CNhs11196.1351-25D37.68
heart, neonate N30.CNhs11202.1390-42D28.32
hippocampus, adult.CNhs10478.13-16E810.94
hippocampus, neonate N00.CNhs11228.627-43G112.35
intestinal mucosa, adult.CNhs10506.860-29I333.70
intestine, adult.CNhs10496.178-9A317.98
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D86.19
intestine, embryo E16.CNhs10585.463-22H411.70
intestine, embryo E17.CNhs10582.482-18D313.79
intestine, embryo E18.CNhs10526.1289-20F717.12
intestine, neonate N00.CNhs11126.644-26D122.30
intestine, neonate N01.CNhs11192.1322-23E916.14
intestine, neonate N06.CNhs11102.688-20B821.36
intestine, neonate N07.CNhs11095.720-20F215.32
intestine, neonate N10.CNhs11098.755-23A517.94
intestine, neonate N20.CNhs11187.827-18D122.47
intestine, neonate N25.CNhs11121.1352-25E319.02
intestine, neonate N30.CNhs11131.1384-42G121.11
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F88.11
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G77.86
kidney, neonate N10.CNhs11206.758-6D59.11
kidney, neonate N20.CNhs11113.832-19I18.56
kidney, neonate N25.CNhs11122.1353-25F314.13
kidney, neonate N30.CNhs11203.1385-42H114.07
liver, adult pregnant day01.CNhs10466.508-5B220.16
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H68.26
liver, embryo E14.CNhs10594.409-16E19.89
liver, embryo E15.CNhs10520.433-16D79.33
liver, embryo E16.CNhs10523.462-17F510.85
liver, embryo E17.CNhs10510.481-18A312.48
liver, embryo E18.CNhs10579.499-43G411.80
liver, neonate N00.CNhs11117.641-24F48.11
liver, neonate N03.CNhs11123.1345-25G218.40
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B918.41
liver, neonate N20.CNhs11220.823-25A322.23
liver, neonate N25.CNhs11198.1368-26H117.58
liver, neonate N30.CNhs11106.1382-42D118.33
lung, adult.CNhs10474.28-22B111.64
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B67.74
lung, embryo E17.CNhs10605.480-44A67.71
lung, embryo E18.CNhs10583.1287-20I614.04
lung, neonate N00.CNhs11224.640-42C68.98
lung, neonate N06.CNhs11212.683-20E59.62
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E68.93
lung, neonate N20.CNhs11109.822-18A416.55
lung, neonate N25.CNhs11119.1359-25C715.71
lung, neonate N30.CNhs11133.1394-42H212.15
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A121.76
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C216.06
medulla oblongata, neonate N30.CNhs11200.1396-42A315.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C711.31
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.36
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.98
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D85.35
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I912.21
ovary, adult.CNhs10507.91-2I79.79
ovary, embryo E18.CNhs11040.505-44H78.37
ovary, neonate N00.CNhs11217.1299-22I47.98
oviduct, adult pregnant day01.CNhs10500.988-6G610.23
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F27.86
pancreas, embryo E16.CNhs11003.460-26E510.00
pancreas, embryo E17.CNhs10599.1558-45G310.93
pancreas, embryo E18.CNhs10580.1535-43I712.91
pancreas, neonate N00.CNhs11105.645-26G911.63
pancreas, neonate N01.CNhs11138.1531-43D78.72
pancreas, neonate N02.CNhs11139.1539-43D810.34
pancreas, neonate N16.CNhs11136.787-43B68.53
pancreas, neonate N25.CNhs11094.1555-45E214.76
pancreas, neonate N30.CNhs11182.1548-44H513.41
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C76.21
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F57.08
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G319.70
prostate, adult.CNhs10470.859-1F824.92
skin, adult.CNhs10492.30-1C38.74
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H37.60
skin, neonate N06.CNhs11097.693-20I57.76
skin, neonate N10.CNhs11108.762-6C48.37
small intestine, neonate N16.CNhs11114.790-21I114.57
spinal cord, adult.CNhs10505.24-13C916.13
spleen, adult.CNhs10465.25-2G211.96
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F28.70
spleen, neonate N10.CNhs11116.752-24D112.24
spleen, neonate N20.CNhs11112.824-19H17.38
spleen, neonate N25.CNhs11099.1354-25G318.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.84
stomach, adult.CNhs10503.33-1H618.14
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D47.56
stomach, embryo E17.CNhs11006.1035-18D59.83
stomach, embryo E18.CNhs10999.1286-20C612.01
stomach, neonate N03.CNhs11193.1340-24B811.46
stomach, neonate N07.CNhs11210.718-18A913.80
stomach, neonate N25.CNhs11104.1355-25E421.20
stomach, neonate N30.CNhs11134.1386-42I124.76
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F53.29
testis, embryo E15.CNhs11034.443-27C55.96
testis, embryo E16.CNhs11033.470-26G56.61
testis, embryo E17.CNhs11029.486-18I55.42
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B76.10
testis, neonate N07.CNhs11222.726-26I45.34
testis, neonate N10.CNhs11204.763-44D97.34
testis, neonate N20.CNhs11110.839-18H316.19
testis, neonate N30.CNhs11130.1391-42E210.08
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I45.07
thymus, embryo E15.CNhs11005.430-45I27.50
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G410.53
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C711.52
thymus, neonate N06.CNhs11197.681-26C410.30
thymus, neonate N07.CNhs11211.713-19D311.74
thymus, neonate N10.CNhs11194.748-24E411.70
thymus, neonate N20.CNhs11186.820-7A211.21
thymus, neonate N25.CNhs11125.1362-25G714.53
thymus, neonate N30.CNhs11132.1393-42G216.36
tongue, adult.CNhs10499.32-1B47.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.39
urinary bladder, adult.CNhs10481.879-12E414.30
uterus, adult pregnant day19.CNhs10497.590-15F513.14
uterus, adult.CNhs10509.92-27E511.17
vagina, adult.CNhs10502.89-27D513.08
vesicular gland, adult.CNhs10491.51-27F820.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.86
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A711.26
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.43
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H28.02
whole body, embryo E14.5.CNhs10578.420-27D28.51
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F27.17
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.93
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.73
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.63
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.41
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.75
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G512.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.31
whole body, embryo E17.5.CNhs10513.490-9F98.87
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B37.25
whole body, neonate N00.CNhs10525.657-19C25.80
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D110.81
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr17:8503966..8504033,%2B&oldid=808944"