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FFCP PHASE1:Mm9::chr16:37868469..37868567,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:37868469..37868567,+
|short_description=p1@Lrrc58
|description=CAGE_peak_1_at_Lrrc58_5end
|association_with_transcript=0bp_to_ENSMUST00000078717,ENSMUST00000171099,NM_177093,uc007zek.1_5end
|EntrezGene=320184
|EntrezGene=320184
|HGNC=
|HGNC=
|UniProt=Q3UGP9,Q8BTI3
|UniProt=Q3UGP9,Q8BTI3
|association_with_transcript=0bp_to_ENSMUST00000078717,ENSMUST00000171099,NM_177093,uc007zek.1_5end
|description=CAGE_peak_1_at_Lrrc58_5end
|id=chr16:37868469..37868567,+
|ontology_enrichment_disease=
|phase1_expression=38.2755744580458,13.2610654902957,19.1099680543605,21.1724947914781,26.5474736871564,26.3570456901667,23.8284893407436,19.3684985162364,39.1392647581634,38.6206468431289,29.1070545983358,28.0000278073631,17.462474452983,16.3476152523525,14.9899392817048,7.49158489342356,5.59649502502517,16.2463015159492,15.0825876966313,16.5511964201232,43.2870346868945,22.3404640201992,17.5003858723087,18.3991286212418,19.2703796096423,16.0784949952206,22.830385796431,17.6686410802429,16.3420140732482,21.674591159354,16.8515188098032,8.25539875497521,11.6862309641068,0,17.6199488048278,21.7767385419625,20.4169356262369,21.3451131675823,23.440060335714,15.7057123192139,12.9410927366823,12.9778642142105,21.3624555333708,39.028013572429,42.8824419058547,35.2409764150429,65.7208729252353,61.047043786525,51.6262529426009,65.3284460889592,67.7534280666755,43.1257693094915,18.9594344845242,36.9934692425786,21.1739093459752,53.252703259441,55.0144204682413,56.2082580582412,32.168317276676,19.0436752537932,23.4517619297286,30.4960078862219,29.3467282716676,19.7977937801908,27.6882581518753,23.4458437932213,38.9480143673926,45.3377600279434,44.068085231103,38.3416864862001,35.1242685456808,38.8485338789173,37.3267834208227,25.9680494335703,28.6577958344527,34.0110951045708,37.4393995397922,47.1166277534343,43.1634358450044,27.4323478478803,28.1781942295422,22.3992749339407,38.2480708631892,47.8348218526928,52.2570007396691,38.3017161115768,45.1318228133156,39.3302830691384,58.4606212532181,66.6541160141848,67.5384258674909,66.2526385275668,93.1560727179618,35.0807074564581,28.5901623676974,45.2507155968309,32.4426610504347,40.3919864509997,29.8753905293299,27.9138263863169,50.4219442800516,46.1975318691544,30.5766287647975,35.5533351576666,25.7624338803345,25.0826266820348,18.1988800205322,45.2168163687478,21.7507822263624,62.6425826853561,28.7985642431786,30.142082352902,35.0535555829209,38.5849959814714,43.9781764687536,55.4189667763869,72.4281255461715,68.8292938938779,30.0767587662957,37.2063754879041,34.8929599167422,32.4866419600599,27.9587641827183,38.0615036115011,49.6388695147889,26.5675337416935,28.7556298814209,19.196887391789,24.2704133709554,42.6903322303745,57.1875753523283,34.5549468310377,39.8057693240313,44.2387741181472,50.2847067834135,45.4275536589721,39.5136731739227,34.5851378296059,37.6556910066175,54.0835569628238,27.3252930221678,27.1284483231498,30.9706863265201,29.8395539314716,47.0812574127189,31.9003163509276,36.5436725782942,27.4225572983357,39.664510699643,38.5776403542351,35.3661759569537,34.6329257235568,28.360819421011,32.3874514865615,29.01528123352,30.0541742895925,21.066395619397,21.6172241976361,19.6072814582959,24.2337153866537,21.1073453982987,25.2086886045421,29.5930919481513,27.5469924446365,25.6083407393048,29.9968788728026,36.4851825903482,42.5025846216497,35.0512480315713,34.8035023847682,44.3446388215831,34.5031970323784,35.3475685618592,52.8773289915865,38.9036404843635,47.2332170820916,16.5209391491899,23.0071992997284,36.8988673425955,31.3519507011592,35.8251542475419,37.3114520553184,35.8028650590241,32.9090333174727,28.4717436926707,34.4220815373183,37.9516165288407,35.0163390792425,36.4582842912755,34.1551375288604,22.6944952368429,31.2651799009356,26.3638382324784,34.1603052703089,34.9393980586549,37.4718443235378,40.5360698180338,50.4977903210294,64.5012678667424,65.8341259989026,61.8574987695017,61.9453762887439,35.2778626233707,17.1850458887577,20.0490175015467,16.1900720917095,17.4459704394113,20.7412357387078,16.8053062175737,21.8649064462616,25.9416362840057,17.8464918572253,25.8782771749238,32.3762624471598,30.5796919652269,31.0672019874947,31.2151499528127,40.0428122731595,65.9568888894779,27.8552375302613,30.6374155711009,30.8936056110842,25.3465468151582,36.1813516074322,45.7043790501146,60.6865644837754,50.9161515462997,58.6881427569254,64.5791813062823,48.3396778411427,55.2591941970866,61.1865517799794,13.5712155545345,22.8440387203858,58.5199484892653,52.9798552905086,42.0642545768015,45.9469811441436,41.4755411802989,44.1824122607653,43.5401342794434,48.4144042927832,48.9011112853454,56.8745739127074,51.2436950389506,63.1260663659096,58.2927410411848,42.0848435392289,57.3167278022459,51.7327319439109,49.1112694820609,29.2027590014299,45.4454616596477,58.5643936552501,57.080409486184,15.0523994416088,18.1394134178851,19.9921384541252,21.5570381802964,42.1186152683181,39.5395288547378,38.5345753246156,34.9367430817027,36.6602639205547,35.8423269154996,46.4109944616841,62.3004478529432,24.8484309763208,20.3093133538925,35.1512737451811,44.1577181769261,54.7592270038357,52.4911375720766,37.4491887410957,38.0168167063211,45.1202310939937,35.7256004849038,46.1681508236144,40.3661066739764,49.7581630657286,45.8389800972044,43.9897611316764,33.5202962124328,56.3692918111949,17.7705716029767,23.9408766837338,22.5937323391048,13.5625289043378,13.5327285443815,13.9554685655979,33.9956859987711,34.7079601762672,32.8915937654529,13.3653886522116,37.6439832361551,30.7012395361542,27.5413619095593,27.1814784818809,27.2953204682722,34.1206796353596,39.3430449252599,33.7665165159398,32.9222032161154,27.3389297758247,20.2929457926309,32.5946070375874,29.2861528109063,39.8624936105298,36.6813898676756,43.5906803766208,42.6006776284087,45.9621478499144,33.5549902162275,19.0851455452545,20.4501304443084,32.8651565453305,22.2997736819181,18.4879722896689,24.6849563657811,30.7925916548068,32.7824235389087,30.6498396275921,28.9471473262171,28.4725388853776,34.2168561880949,34.5833815019363,32.6483900478171,32.0385432662297,34.1280554370181,28.1145675682862,18.6468200834214,14.1747893442972,13.5986539254904,56.9909302394962,41.6655095501624,40.6596605873329,29.7972046919902,35.1100472824754,37.2736216127264,36.365693684067,30.363462212288,35.9173151098307,26.718218271055,24.1726047164704,27.675922509504,29.2708782095743,23.1102628581944,29.5123377698537,37.0520830875511,33.5180893656866,28.3417785551863,32.3331933700831,38.9880482488047,42.4678504519533,30.0033082532181,30.0811183568786,27.2781328153043,37.1464901292782,31.68491248628,35.2731258391963,31.1826219874708,38.9272926621605,37.2181838832374,39.5323763764951,36.3876783466846,42.6329377224788,32.5547861634612,32.8253591899706,26.400932433677,26.2664193115819,29.3276513635205,30.958786742686,33.4088300474424,34.9458330592624,30.548971469753,27.0961802780978,30.2843173876272,41.5245281026726,35.4718704191281,33.9840464195694,33.9661765830842,34.2410419020985,39.545855251134,36.971965534816,35.7915360921475,46.841889782529,50.3088313341058,41.6917782135884,37.3307215348879
|phase1_expression=38.2755744580458,13.2610654902957,19.1099680543605,21.1724947914781,26.5474736871564,26.3570456901667,23.8284893407436,19.3684985162364,39.1392647581634,38.6206468431289,29.1070545983358,28.0000278073631,17.462474452983,16.3476152523525,14.9899392817048,7.49158489342356,5.59649502502517,16.2463015159492,15.0825876966313,16.5511964201232,43.2870346868945,22.3404640201992,17.5003858723087,18.3991286212418,19.2703796096423,16.0784949952206,22.830385796431,17.6686410802429,16.3420140732482,21.674591159354,16.8515188098032,8.25539875497521,11.6862309641068,0,17.6199488048278,21.7767385419625,20.4169356262369,21.3451131675823,23.440060335714,15.7057123192139,12.9410927366823,12.9778642142105,21.3624555333708,39.028013572429,42.8824419058547,35.2409764150429,65.7208729252353,61.047043786525,51.6262529426009,65.3284460889592,67.7534280666755,43.1257693094915,18.9594344845242,36.9934692425786,21.1739093459752,53.252703259441,55.0144204682413,56.2082580582412,32.168317276676,19.0436752537932,23.4517619297286,30.4960078862219,29.3467282716676,19.7977937801908,27.6882581518753,23.4458437932213,38.9480143673926,45.3377600279434,44.068085231103,38.3416864862001,35.1242685456808,38.8485338789173,37.3267834208227,25.9680494335703,28.6577958344527,34.0110951045708,37.4393995397922,47.1166277534343,43.1634358450044,27.4323478478803,28.1781942295422,22.3992749339407,38.2480708631892,47.8348218526928,52.2570007396691,38.3017161115768,45.1318228133156,39.3302830691384,58.4606212532181,66.6541160141848,67.5384258674909,66.2526385275668,93.1560727179618,35.0807074564581,28.5901623676974,45.2507155968309,32.4426610504347,40.3919864509997,29.8753905293299,27.9138263863169,50.4219442800516,46.1975318691544,30.5766287647975,35.5533351576666,25.7624338803345,25.0826266820348,18.1988800205322,45.2168163687478,21.7507822263624,62.6425826853561,28.7985642431786,30.142082352902,35.0535555829209,38.5849959814714,43.9781764687536,55.4189667763869,72.4281255461715,68.8292938938779,30.0767587662957,37.2063754879041,34.8929599167422,32.4866419600599,27.9587641827183,38.0615036115011,49.6388695147889,26.5675337416935,28.7556298814209,19.196887391789,24.2704133709554,42.6903322303745,57.1875753523283,34.5549468310377,39.8057693240313,44.2387741181472,50.2847067834135,45.4275536589721,39.5136731739227,34.5851378296059,37.6556910066175,54.0835569628238,27.3252930221678,27.1284483231498,30.9706863265201,29.8395539314716,47.0812574127189,31.9003163509276,36.5436725782942,27.4225572983357,39.664510699643,38.5776403542351,35.3661759569537,34.6329257235568,28.360819421011,32.3874514865615,29.01528123352,30.0541742895925,21.066395619397,21.6172241976361,19.6072814582959,24.2337153866537,21.1073453982987,25.2086886045421,29.5930919481513,27.5469924446365,25.6083407393048,29.9968788728026,36.4851825903482,42.5025846216497,35.0512480315713,34.8035023847682,44.3446388215831,34.5031970323784,35.3475685618592,52.8773289915865,38.9036404843635,47.2332170820916,16.5209391491899,23.0071992997284,36.8988673425955,31.3519507011592,35.8251542475419,37.3114520553184,35.8028650590241,32.9090333174727,28.4717436926707,34.4220815373183,37.9516165288407,35.0163390792425,36.4582842912755,34.1551375288604,22.6944952368429,31.2651799009356,26.3638382324784,34.1603052703089,34.9393980586549,37.4718443235378,40.5360698180338,50.4977903210294,64.5012678667424,65.8341259989026,61.8574987695017,61.9453762887439,35.2778626233707,17.1850458887577,20.0490175015467,16.1900720917095,17.4459704394113,20.7412357387078,16.8053062175737,21.8649064462616,25.9416362840057,17.8464918572253,25.8782771749238,32.3762624471598,30.5796919652269,31.0672019874947,31.2151499528127,40.0428122731595,65.9568888894779,27.8552375302613,30.6374155711009,30.8936056110842,25.3465468151582,36.1813516074322,45.7043790501146,60.6865644837754,50.9161515462997,58.6881427569254,64.5791813062823,48.3396778411427,55.2591941970866,61.1865517799794,13.5712155545345,22.8440387203858,58.5199484892653,52.9798552905086,42.0642545768015,45.9469811441436,41.4755411802989,44.1824122607653,43.5401342794434,48.4144042927832,48.9011112853454,56.8745739127074,51.2436950389506,63.1260663659096,58.2927410411848,42.0848435392289,57.3167278022459,51.7327319439109,49.1112694820609,29.2027590014299,45.4454616596477,58.5643936552501,57.080409486184,15.0523994416088,18.1394134178851,19.9921384541252,21.5570381802964,42.1186152683181,39.5395288547378,38.5345753246156,34.9367430817027,36.6602639205547,35.8423269154996,46.4109944616841,62.3004478529432,24.8484309763208,20.3093133538925,35.1512737451811,44.1577181769261,54.7592270038357,52.4911375720766,37.4491887410957,38.0168167063211,45.1202310939937,35.7256004849038,46.1681508236144,40.3661066739764,49.7581630657286,45.8389800972044,43.9897611316764,33.5202962124328,56.3692918111949,17.7705716029767,23.9408766837338,22.5937323391048,13.5625289043378,13.5327285443815,13.9554685655979,33.9956859987711,34.7079601762672,32.8915937654529,13.3653886522116,37.6439832361551,30.7012395361542,27.5413619095593,27.1814784818809,27.2953204682722,34.1206796353596,39.3430449252599,33.7665165159398,32.9222032161154,27.3389297758247,20.2929457926309,32.5946070375874,29.2861528109063,39.8624936105298,36.6813898676756,43.5906803766208,42.6006776284087,45.9621478499144,33.5549902162275,19.0851455452545,20.4501304443084,32.8651565453305,22.2997736819181,18.4879722896689,24.6849563657811,30.7925916548068,32.7824235389087,30.6498396275921,28.9471473262171,28.4725388853776,34.2168561880949,34.5833815019363,32.6483900478171,32.0385432662297,34.1280554370181,28.1145675682862,18.6468200834214,14.1747893442972,13.5986539254904,56.9909302394962,41.6655095501624,40.6596605873329,29.7972046919902,35.1100472824754,37.2736216127264,36.365693684067,30.363462212288,35.9173151098307,26.718218271055,24.1726047164704,27.675922509504,29.2708782095743,23.1102628581944,29.5123377698537,37.0520830875511,33.5180893656866,28.3417785551863,32.3331933700831,38.9880482488047,42.4678504519533,30.0033082532181,30.0811183568786,27.2781328153043,37.1464901292782,31.68491248628,35.2731258391963,31.1826219874708,38.9272926621605,37.2181838832374,39.5323763764951,36.3876783466846,42.6329377224788,32.5547861634612,32.8253591899706,26.400932433677,26.2664193115819,29.3276513635205,30.958786742686,33.4088300474424,34.9458330592624,30.548971469753,27.0961802780978,30.2843173876272,41.5245281026726,35.4718704191281,33.9840464195694,33.9661765830842,34.2410419020985,39.545855251134,36.971965534816,35.7915360921475,46.841889782529,50.3088313341058,41.6917782135884,37.3307215348879
|short_description=p1@Lrrc58
}}
}}

Revision as of 00:32, 18 April 2012

Short description:p1@Lrrc58
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrrc58_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000078717, ENSMUST00000171099, NM_177093, uc007zek.1_5end
EntrezGene:Lrrc58
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Lrrc58

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I513.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I619.11
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.17
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I823.83
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.37
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E739.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F238.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E629.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E816.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.49
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A55.60
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A216.25
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A415.08
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A343.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D118.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D219.27
GP2+ M cell, pool1.CNhs13228.11845-124H916.08
GP2+ M cell, pool2.CNhs13231.11846-124I122.83
GP2+ M cell, pool3.CNhs13240.11847-124I217.67
Ileum epithelium, pool1.CNhs13199.10252-104B916.34
Ileum epithelium, pool2.CNhs13232.10253-104C121.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F621.78
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G821.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H421.36
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D839.03
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D942.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.24
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B765.72
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C261.05
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B851.63
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C365.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C467.75
Mouse Astrocytes, donor3.CNhs12107.11633-122C443.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.96
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C153.25
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E155.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C556.21
Mouse Granule cells, donor1.CNhs12131.11713-123C332.17
Mouse Granule cells, donor2.CNhs12357.11731-123E319.04
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C630.50
Mouse Meningeal cells, donor3.CNhs12109.11639-122D129.35
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C719.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E727.69
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D223.45
Mouse Microglia, donor1.CNhs12629.11718-123C838.95
Mouse Microglia, donor2.CNhs12634.11736-123E845.34
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D544.07
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F538.34
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D935.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D225.97
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F228.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F347.12
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D743.16
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D427.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F428.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D822.40
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E438.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E547.83
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I652.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F645.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.33
Mouse Schwann, donor1.CNhs12507.11728-123D958.46
Mouse Schwann, donor2.CNhs12573.11746-123F966.65
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G367.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F766.25
Mouse hepatocyte, donor1.CNhs13078.11714-123C493.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C835.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F428.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F645.25
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A732.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I740.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E329.88
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I827.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G650.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H146.20
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I830.58
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G125.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G225.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G318.20
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B645.22
accessory axillary lymph node, adult.CNhs10475.1063-29H921.75
adrenal gland, adult.CNhs10508.49-24D762.64
adrenal gland, embryo E14.CNhs11038.406-44C528.80
adrenal gland, embryo E16.CNhs11004.1254-43D630.14
adrenal gland, embryo E17.CNhs11043.1263-45I135.05
adrenal gland, embryo E18.CNhs11026.1262-18F538.58
adrenal gland, neonate N00.CNhs11191.1311-23C143.98
adrenal gland, neonate N25.CNhs11223.1377-27I355.42
amnion, adult pregnant day17.5.CNhs10488.583-22A872.43
aorta, adult.CNhs10498.46-23H168.83
bone (os femoris), adult.CNhs10483.56-12G230.08
bone (os femoris), neonate N02.CNhs11227.1985-43F537.21
bone (os femoris), neonate N16.CNhs11225.1525-43A634.89
bone (os femoris), neonate N20.CNhs11195.1350-25C332.49
cecum, adult.CNhs10467.37-13H427.96
cerebellum, adult.CNhs10494.15-8B238.06
cerebellum, neonate N30.CNhs11135.1395-42I249.64
colon, adult.CNhs10468.36-18H726.57
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C728.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D424.27
corpora quadrigemina, adult.CNhs10501.16-22A442.69
corpus striatum, adult.CNhs10487.19-21D857.19
corpus striatum, neonate N00.CNhs11226.630-43F134.55
cortex, adult.CNhs10473.12-14D539.81
cortex, neonate N30.CNhs11107.1392-42F244.24
diencephalon, adult.CNhs10482.20-12F250.28
diencephalon, neonate N30.CNhs11201.1388-42B245.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B139.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A234.59
epididymis, adult.CNhs10490.58-23B237.66
eyeball, adult.CNhs10484.31-12G454.08
eyeball, embryo E12.CNhs11016.345-16C627.33
eyeball, embryo E14.CNhs10521.399-16E227.13
eyeball, embryo E15.CNhs10593.426-16C930.97
eyeball, embryo E17.CNhs11023.1261-18D429.84
eyeball, neonate N00.CNhs11207.633-15C647.08
eyeball, neonate N01.CNhs11140.1532-43E731.90
eyeball, neonate N02.CNhs11205.1551-44G836.54
eyeball, neonate N16.CNhs11188.777-19A227.42
forelimb, embryo E11.CNhs10596.335-25E239.66
forelimb, embryo E12.CNhs10600.359-14H238.58
forelimb, embryo E13.CNhs10589.384-1E235.37
forelimb, embryo E14.CNhs10577.413-26A834.63
forelimb, embryo E15.CNhs11007.437-20E728.36
forelimb, embryo E17.CNhs10598.1517-43C432.39
forelimb, embryo E18.CNhs11008.1520-43B529.02
gonad, embryo E13.CNhs11044.1564-45I630.05
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.07
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D221.62
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D519.61
heart, embryo E11.CNhs10586.331-24E924.23
heart, embryo E12.CNhs11015.353-12F521.11
heart, embryo E13.CNhs11013.376-3I925.21
heart, embryo E14.CNhs10597.403-26D429.59
heart, embryo E15.CNhs11017.431-16C827.55
heart, embryo E16.CNhs11021.457-17C625.61
heart, embryo E17.CNhs11025.479-18E530.00
heart, embryo E18.CNhs11030.1283-20G336.49
heart, neonate N00.CNhs11213.639-21E342.50
heart, neonate N03.CNhs11221.1349-25I235.05
heart, neonate N10.CNhs11118.749-24G134.80
heart, neonate N16.CNhs11209.782-15G144.34
heart, neonate N20.CNhs11127.821-26I634.50
heart, neonate N25.CNhs11196.1351-25D335.35
heart, neonate N30.CNhs11202.1390-42D252.88
hippocampus, adult.CNhs10478.13-16E838.90
hippocampus, neonate N00.CNhs11228.627-43G147.23
intestinal mucosa, adult.CNhs10506.860-29I316.52
intestine, adult.CNhs10496.178-9A323.01
intestine, embryo E12.CNhs11019.1251-16I536.90
intestine, embryo E13.CNhs11010.381-16D531.35
intestine, embryo E15.CNhs10602.976-16D835.83
intestine, embryo E16.CNhs10585.463-22H437.31
intestine, embryo E17.CNhs10582.482-18D335.80
intestine, embryo E18.CNhs10526.1289-20F732.91
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E934.42
intestine, neonate N06.CNhs11102.688-20B837.95
intestine, neonate N07.CNhs11095.720-20F235.02
intestine, neonate N10.CNhs11098.755-23A536.46
intestine, neonate N20.CNhs11187.827-18D134.16
intestine, neonate N25.CNhs11121.1352-25E322.69
intestine, neonate N30.CNhs11131.1384-42G131.27
kidney, embryo E14.CNhs10606.411-4I926.36
kidney, embryo E15.CNhs10997.434-16F834.16
kidney, embryo E16.CNhs10584.464-22A534.94
kidney, embryo E17.CNhs11028.483-18I237.47
kidney, embryo E18.CNhs11001.1288-20C740.54
kidney, neonate N00.CNhs11214.646-21G750.50
kidney, neonate N10.CNhs11206.758-6D564.50
kidney, neonate N20.CNhs11113.832-19I165.83
kidney, neonate N25.CNhs11122.1353-25F361.86
kidney, neonate N30.CNhs11203.1385-42H161.95
liver, adult pregnant day01.CNhs10466.508-5B235.28
liver, embryo E12.CNhs10601.355-15F817.19
liver, embryo E13.CNhs10524.378-3H620.05
liver, embryo E14.CNhs10594.409-16E116.19
liver, embryo E15.CNhs10520.433-16D717.45
liver, embryo E16.CNhs10523.462-17F520.74
liver, embryo E17.CNhs10510.481-18A316.81
liver, embryo E18.CNhs10579.499-43G421.86
liver, neonate N00.CNhs11117.641-24F425.94
liver, neonate N03.CNhs11123.1345-25G217.85
liver, neonate N06.CNhs11101.684-20A825.88
liver, neonate N07.CNhs11103.716-20H232.38
liver, neonate N10.CNhs11115.751-24B930.58
liver, neonate N20.CNhs11220.823-25A331.07
liver, neonate N25.CNhs11198.1368-26H131.22
liver, neonate N30.CNhs11106.1382-42D140.04
lung, adult.CNhs10474.28-22B165.96
lung, embryo E12.CNhs10522.354-16G227.86
lung, embryo E14.CNhs10604.404-26F830.64
lung, embryo E15.CNhs11020.432-17C530.89
lung, embryo E16.CNhs10998.458-17B625.35
lung, embryo E17.CNhs10605.480-44A636.18
lung, embryo E18.CNhs10583.1287-20I645.70
lung, neonate N00.CNhs11224.640-42C660.69
lung, neonate N06.CNhs11212.683-20E550.92
lung, neonate N07.CNhs11111.715-19A358.69
lung, neonate N10.CNhs11219.750-23E664.58
lung, neonate N20.CNhs11109.822-18A448.34
lung, neonate N25.CNhs11119.1359-25C755.26
lung, neonate N30.CNhs11133.1394-42H261.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A113.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A122.84
mammary gland, adult lactating day02.CNhs10480.595-22B658.52
mammary gland, adult pregnant day19.CNhs10476.588-5H252.98
medulla oblongata, adult.CNhs10477.17-12C242.06
medulla oblongata, neonate N30.CNhs11200.1396-42A345.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C741.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C244.18
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.54
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E248.41
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E348.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D756.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D851.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D963.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D458.29
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D542.08
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D657.32
olfactory brain, adult.CNhs10489.18-22I951.73
ovary, adult.CNhs10507.91-2I749.11
ovary, embryo E18.CNhs11040.505-44H729.20
ovary, neonate N00.CNhs11217.1299-22I445.45
oviduct, adult pregnant day01.CNhs10500.988-6G658.56
pancreas, adult.CNhs10486.34-16E457.08
pancreas, embryo E14.CNhs11012.405-44F415.05
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E519.99
pancreas, embryo E17.CNhs10599.1558-45G321.56
pancreas, embryo E18.CNhs10580.1535-43I742.12
pancreas, neonate N00.CNhs11105.645-26G939.54
pancreas, neonate N01.CNhs11138.1531-43D738.53
pancreas, neonate N02.CNhs11139.1539-43D834.94
pancreas, neonate N16.CNhs11136.787-43B636.66
pancreas, neonate N25.CNhs11094.1555-45E235.84
pancreas, neonate N30.CNhs11182.1548-44H546.41
pituitary gland, adult.CNhs10493.21-1G862.30
pituitary gland, embryo E12.CNhs11018.346-16E624.85
pituitary gland, embryo E13.CNhs11009.370-44C720.31
pituitary gland, embryo E14.CNhs11037.398-44A535.15
pituitary gland, embryo E15.CNhs10592.427-16B944.16
pituitary gland, embryo E16.CNhs11036.449-43F654.76
pituitary gland, embryo E17.CNhs11039.1265-44F552.49
pituitary gland, neonate N00.CNhs11190.1308-22E937.45
placenta, adult pregnant day10.CNhs10472.539-13I738.02
placenta, adult pregnant day17.CNhs10464.577-18G345.12
prostate, adult.CNhs10470.859-1F835.73
skin, adult.CNhs10492.30-1C346.17
skin, neonate N00.CNhs11124.650-25G440.37
skin, neonate N03.CNhs11215.662-22H349.76
skin, neonate N06.CNhs11097.693-20I545.84
skin, neonate N10.CNhs11108.762-6C443.99
small intestine, neonate N16.CNhs11114.790-21I133.52
spinal cord, adult.CNhs10505.24-13C956.37
spleen, adult.CNhs10465.25-2G217.77
spleen, embryo E16.CNhs11035.461-43C123.94
spleen, embryo E18.CNhs11011.1271-21F222.59
spleen, neonate N10.CNhs11116.752-24D113.56
spleen, neonate N20.CNhs11112.824-19H113.53
spleen, neonate N25.CNhs11099.1354-25G313.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C634.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C934.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D332.89
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E337.64
stomach, embryo E15.CNhs10603.1252-16G830.70
stomach, embryo E16.CNhs11022.459-17D427.54
stomach, embryo E17.CNhs11006.1035-18D527.18
stomach, embryo E18.CNhs10999.1286-20C627.30
stomach, neonate N03.CNhs11193.1340-24B834.12
stomach, neonate N07.CNhs11210.718-18A939.34
stomach, neonate N25.CNhs11104.1355-25E433.77
stomach, neonate N30.CNhs11134.1386-42I132.92
submandibular gland, adult.CNhs10469.59-29C127.34
testis, adult.CNhs10504.57-7G520.29
testis, embryo E13.CNhs11031.389-23F532.59
testis, embryo E15.CNhs11034.443-27C529.29
testis, embryo E16.CNhs11033.470-26G539.86
testis, embryo E17.CNhs11029.486-18I536.68
testis, embryo E18.CNhs11027.503-18G543.59
testis, neonate N00.CNhs11189.1300-22B742.60
testis, neonate N07.CNhs11222.726-26I445.96
testis, neonate N10.CNhs11204.763-44D933.55
testis, neonate N20.CNhs11110.839-18H319.09
testis, neonate N30.CNhs11130.1391-42E220.45
thymus, adult.CNhs10471.38-12B532.87
thymus, embryo E14.CNhs11041.402-44I422.30
thymus, embryo E15.CNhs11005.430-45I218.49
thymus, embryo E16.CNhs11002.456-26C524.68
thymus, embryo E17.CNhs10581.478-18C130.79
thymus, embryo E18.CNhs10595.1273-19G432.78
thymus, neonate N02.CNhs11181.1541-43F830.65
thymus, neonate N03.CNhs11137.2104-43C728.95
thymus, neonate N06.CNhs11197.681-26C428.47
thymus, neonate N07.CNhs11211.713-19D334.22
thymus, neonate N10.CNhs11194.748-24E434.58
thymus, neonate N20.CNhs11186.820-7A232.65
thymus, neonate N25.CNhs11125.1362-25G732.04
thymus, neonate N30.CNhs11132.1393-42G234.13
tongue, adult.CNhs10499.32-1B428.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H318.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G513.60
urinary bladder, adult.CNhs10481.879-12E456.99
uterus, adult pregnant day19.CNhs10497.590-15F541.67
uterus, adult.CNhs10509.92-27E540.66
vagina, adult.CNhs10502.89-27D529.80
vesicular gland, adult.CNhs10491.51-27F835.11
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A236.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A330.36
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D735.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A729.27
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A823.11
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I837.05
whole body, embryo E12.CNhs10587.857-27C933.52
whole body, embryo E13.CNhs10512.372-23H228.34
whole body, embryo E14.5.CNhs10578.420-27D232.33
whole body, embryo E14.CNhs10519.395-14B138.99
whole body, embryo E16.CNhs10514.453-14F242.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G530.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G537.15
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.68
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G535.27
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G538.93
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G537.22
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G539.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G526.27
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G529.33
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.41
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G534.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G527.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.28
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G541.52
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G535.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G533.98
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G533.97
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G534.24
whole body, embryo E17.5.CNhs10513.490-9F939.55
whole body, embryo E17.CNhs10517.475-3I536.97
whole body, embryo E18.CNhs10516.493-3B335.79
whole body, neonate N00.CNhs10525.657-19C246.84
whole body, neonate N01.CNhs10576.659-23C650.31
whole body, neonate N06.CNhs10515.692-21D141.69
whole body, neonate N10.CNhs10518.761-6B437.33





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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