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FFCP PHASE1:Mm9::chr16:32914180..32914224,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:32914180..32914224,+
|short_description=p1@Lrch3
|description=CAGE_peak_1_at_Lrch3_5end
|association_with_transcript=0bp_to_ENSMUST00000023491,ENSMUST00000156928,ENSMUST00000164486,ENSMUST00000170201,ENSMUST00000170899,ENSMUST00000171118,NM_001081255,uc007yzr.1,uc007yzs.1,uc012aet.1,uc012aeu.1_5end
|EntrezGene=70144
|EntrezGene=70144
|HGNC=
|HGNC=
|UniProt=Q8BVU0,E9Q0H5,B2RXP1,B7ZWM8
|UniProt=Q8BVU0,E9Q0H5,B2RXP1,B7ZWM8
|association_with_transcript=0bp_to_ENSMUST00000023491,ENSMUST00000156928,ENSMUST00000164486,ENSMUST00000170201,ENSMUST00000170899,ENSMUST00000171118,NM_001081255,uc007yzr.1,uc007yzs.1,uc012aet.1,uc012aeu.1_5end
|description=CAGE_peak_1_at_Lrch3_5end
|id=chr16:32914180..32914224,+
|ontology_enrichment_disease=
|phase1_expression=36.9943836812074,43.2729505472808,46.4099224177327,40.2277401038084,63.6137577031861,34.2473714700255,28.5007421526541,60.4297153706577,54.90760163915,44.7063245275008,30.3055803759144,28.0797999663584,63.6866715344085,53.0641842683314,24.650122374359,30.9787159106434,30.0811607595103,50.473946457318,54.2973157078726,41.1657962244089,34.9527922520897,16.3830069481461,19.5899841854202,16.4792195477209,18.1233332043064,29.285830169866,25.8457197695445,28.6576739472232,17.4821545899864,21.4225610295941,19.2905544270115,22.8611042445467,25.8327210785519,0,13.8648777480612,11.9688944658114,15.7210404322024,35.9937202433741,25.0027310247616,23.5585684788209,35.8821207698919,38.250547157673,33.0147040061184,19.8916972401412,19.1602400004883,20.0065959856233,18.7773922643529,10.9012578190223,8.34807494390993,13.4156630361256,16.2384249085421,7.18762821824858,35.4021298781824,55.8528849348735,48.0614132773724,25.9832030396306,24.0688089548556,19.5955395065428,33.179899580974,28.0365219014177,29.7900759647904,9.14880236586657,8.89294796111139,8.99899717281399,4.94433181283487,2.8419204597844,12.2836045312546,10.373894243682,35.1507785725739,33.3464667679276,30.0764694732476,26.5655415495537,25.3998822094356,30.7451906029535,35.7503606898022,32.1726575313507,26.4278114398533,26.6866536598042,28.2636021191488,39.3021137435978,38.6077856002169,31.7757156039624,24.5681039121215,33.2029939918691,31.3236407942461,33.2930301585245,32.0336281797982,36.3478919359336,31.8807273932705,38.3147809741403,55.3641173420205,24.0918685554788,5.439770669662,7.01614149129162,12.9955283489534,17.0250217096988,17.9768857768642,26.587130322177,20.2633083590238,23.6737514921928,43.5206167109943,44.9142670950112,53.5091003383956,99.5493384414664,17.9687564039308,12.6679932737549,15.6712577954583,23.1793275829692,72.7615453048552,29.3915435348353,24.6349164007913,17.354532263792,20.2941637585331,20.0461111934988,34.8062573121686,21.4889871173745,29.9105910958592,51.1881723496487,18.5768215909474,31.8680694396396,32.9053862505986,28.1227646818429,3.72783522436244,63.8262137485173,53.6183569442445,24.2684202448162,19.6496804189709,12.5979573508616,15.3754974758408,35.9497534571574,29.2800385803921,25.8847965352501,22.9448102653805,21.2243829584174,29.9214784165767,27.5810147215188,38.2916008077189,27.3695335342205,26.0304441186685,27.5678831211281,29.2770996666083,22.9902104433473,30.7906241967147,29.6888491136359,43.1351404619419,40.4839356100125,40.5728467343626,36.2184719034622,30.3950870035308,42.1706558774237,40.9966119302001,30.4682068074329,39.2046621408093,37.611233984394,32.3077954160471,31.0493456236849,7.72434506044558,8.74982884190032,12.5031939734061,30.2403627901833,30.2538617375614,23.2280059284709,32.9075182463442,27.9405209081313,27.4595460939533,30.229412817553,27.9004337455604,37.9487362693301,33.4056495324365,34.8035023847682,39.7237166774693,37.1347968060344,33.3716175242397,32.47795334001,26.2862435705159,27.3726268928897,32.3810407324122,24.3294521330461,29.4337785738623,32.9776074041823,28.6085764135047,28.0340099226446,28.2420115682985,19.0225626112559,24.6755112003146,20.5873693405014,26.138861715228,26.8591237255554,32.1690743746548,33.2563181202062,29.1786367330837,29.6720497149007,21.2428049067451,34.0460567576992,50.7184810528862,32.9915151109409,32.0021603826582,40.1878247971525,36.0448261608267,27.0126570802672,25.9047900938268,22.2114895059241,13.0439155918346,21.5230186373761,18.2799865455279,15.5154857545549,19.4745716532963,19.5353499399458,19.6061905871693,21.8649064462616,23.023202202055,16.1991233780968,20.1275489138296,18.6070473834252,18.4102227137591,17.9331003342449,13.8136008411872,16.4030797263545,45.6340379711514,28.0447289420317,31.1263105004269,30.5541154395339,31.4484932706593,38.8614517265013,38.3250261826482,47.4174764294451,38.3053400178044,38.0919266195893,50.3877068957659,46.0455914351224,40.0629157928878,38.6212986412636,33.1740824666399,26.1074728232981,24.0964493779328,24.5583704211212,30.5046120976805,27.6619580357599,13.4426655208874,32.0638077549554,39.1230192076158,32.0159770323244,38.7762115919038,33.2166629154047,36.3161838754302,40.1968673720142,36.0281524490656,40.331308391761,41.505216684385,42.7357350841003,32.5042795126935,29.7369558124316,41.6990615945155,34.4787557012599,29.2039304347918,19.9080121647085,18.1394134178851,23.7642400492432,18.8993211443695,26.1319875752338,37.9889590957285,28.3556308992454,35.2932404600874,29.0753817300951,25.3004660579997,25.7838858120467,33.703520969625,33.8514856778863,21.085465456589,27.0064664139806,30.6798604201133,28.3606419987292,31.0997648938009,26.1839856238555,22.0591405579888,37.4942765428962,23.8170669899359,35.2856581294767,42.3036797943273,33.292734560342,29.1268519367653,31.1867709515616,27.1077178065761,31.1514507377656,29.3897914972307,32.8155120061524,27.0384009959779,23.5460571255864,28.9791762768573,29.2836061704349,26.1766782190537,25.3312128705821,29.8511943417555,13.3653886522116,27.2048954479776,33.3443926088032,29.0534366810645,21.5360944894903,22.4913440658563,24.1407180028829,27.0276800221848,23.5580347785627,27.3487593645683,23.6108938973032,32.694190443683,30.3518588469277,24.8187735685646,32.2788972651119,20.9238914033924,26.1881994510706,33.0947412981026,31.5094611322359,26.7391328285563,43.2435576278551,39.1720808510697,39.8174011991505,19.6643458831459,18.3852613325041,24.5550355428033,35.6263124378288,40.1336336658155,38.70293474543,39.137724701263,39.679814829622,39.1702986206699,41.2379097209678,52.4323398379868,50.0301576529713,55.7502823406084,25.3938029649037,19.3127779435436,16.6867773293625,25.1826924546118,26.6601639764423,31.3429734003474,31.5020793739696,23.7948900777763,22.069172577556,18.0720589637461,19.3336599333014,22.3429250241365,18.9038500578056,21.9226406326606,14.3524840504043,12.1504050041725,22.0657389579868,21.7508356312418,17.6038505995619,24.701388725034,41.4985868337072,32.0979178817772,31.3607665018099,23.267061051706,24.4511866238519,29.5588147976148,32.1414689292675,22.1434254618353,38.4099761880972,28.3896815877069,32.4437307184051,33.3363766592781,40.8480472343066,39.1709898277282,38.579788993929,37.0829843023538,35.302387344858,34.2031297666745,37.9773213946745,26.7438016860624,29.993411240928,37.1960456317821,33.5750222420679,35.855673938241,35.5381353145041,26.7074840394248,32.6206442182925,36.395502510691,26.9348290395714,32.6246299841479,36.7421719260852,37.2400249284417,35.7904103139581,29.7076180910958,28.9780270408017,30.6450407063485,33.9496265396311,36.9186480892868,30.8827986767322,35.0120431786836
|phase1_expression=36.9943836812074,43.2729505472808,46.4099224177327,40.2277401038084,63.6137577031861,34.2473714700255,28.5007421526541,60.4297153706577,54.90760163915,44.7063245275008,30.3055803759144,28.0797999663584,63.6866715344085,53.0641842683314,24.650122374359,30.9787159106434,30.0811607595103,50.473946457318,54.2973157078726,41.1657962244089,34.9527922520897,16.3830069481461,19.5899841854202,16.4792195477209,18.1233332043064,29.285830169866,25.8457197695445,28.6576739472232,17.4821545899864,21.4225610295941,19.2905544270115,22.8611042445467,25.8327210785519,0,13.8648777480612,11.9688944658114,15.7210404322024,35.9937202433741,25.0027310247616,23.5585684788209,35.8821207698919,38.250547157673,33.0147040061184,19.8916972401412,19.1602400004883,20.0065959856233,18.7773922643529,10.9012578190223,8.34807494390993,13.4156630361256,16.2384249085421,7.18762821824858,35.4021298781824,55.8528849348735,48.0614132773724,25.9832030396306,24.0688089548556,19.5955395065428,33.179899580974,28.0365219014177,29.7900759647904,9.14880236586657,8.89294796111139,8.99899717281399,4.94433181283487,2.8419204597844,12.2836045312546,10.373894243682,35.1507785725739,33.3464667679276,30.0764694732476,26.5655415495537,25.3998822094356,30.7451906029535,35.7503606898022,32.1726575313507,26.4278114398533,26.6866536598042,28.2636021191488,39.3021137435978,38.6077856002169,31.7757156039624,24.5681039121215,33.2029939918691,31.3236407942461,33.2930301585245,32.0336281797982,36.3478919359336,31.8807273932705,38.3147809741403,55.3641173420205,24.0918685554788,5.439770669662,7.01614149129162,12.9955283489534,17.0250217096988,17.9768857768642,26.587130322177,20.2633083590238,23.6737514921928,43.5206167109943,44.9142670950112,53.5091003383956,99.5493384414664,17.9687564039308,12.6679932737549,15.6712577954583,23.1793275829692,72.7615453048552,29.3915435348353,24.6349164007913,17.354532263792,20.2941637585331,20.0461111934988,34.8062573121686,21.4889871173745,29.9105910958592,51.1881723496487,18.5768215909474,31.8680694396396,32.9053862505986,28.1227646818429,3.72783522436244,63.8262137485173,53.6183569442445,24.2684202448162,19.6496804189709,12.5979573508616,15.3754974758408,35.9497534571574,29.2800385803921,25.8847965352501,22.9448102653805,21.2243829584174,29.9214784165767,27.5810147215188,38.2916008077189,27.3695335342205,26.0304441186685,27.5678831211281,29.2770996666083,22.9902104433473,30.7906241967147,29.6888491136359,43.1351404619419,40.4839356100125,40.5728467343626,36.2184719034622,30.3950870035308,42.1706558774237,40.9966119302001,30.4682068074329,39.2046621408093,37.611233984394,32.3077954160471,31.0493456236849,7.72434506044558,8.74982884190032,12.5031939734061,30.2403627901833,30.2538617375614,23.2280059284709,32.9075182463442,27.9405209081313,27.4595460939533,30.229412817553,27.9004337455604,37.9487362693301,33.4056495324365,34.8035023847682,39.7237166774693,37.1347968060344,33.3716175242397,32.47795334001,26.2862435705159,27.3726268928897,32.3810407324122,24.3294521330461,29.4337785738623,32.9776074041823,28.6085764135047,28.0340099226446,28.2420115682985,19.0225626112559,24.6755112003146,20.5873693405014,26.138861715228,26.8591237255554,32.1690743746548,33.2563181202062,29.1786367330837,29.6720497149007,21.2428049067451,34.0460567576992,50.7184810528862,32.9915151109409,32.0021603826582,40.1878247971525,36.0448261608267,27.0126570802672,25.9047900938268,22.2114895059241,13.0439155918346,21.5230186373761,18.2799865455279,15.5154857545549,19.4745716532963,19.5353499399458,19.6061905871693,21.8649064462616,23.023202202055,16.1991233780968,20.1275489138296,18.6070473834252,18.4102227137591,17.9331003342449,13.8136008411872,16.4030797263545,45.6340379711514,28.0447289420317,31.1263105004269,30.5541154395339,31.4484932706593,38.8614517265013,38.3250261826482,47.4174764294451,38.3053400178044,38.0919266195893,50.3877068957659,46.0455914351224,40.0629157928878,38.6212986412636,33.1740824666399,26.1074728232981,24.0964493779328,24.5583704211212,30.5046120976805,27.6619580357599,13.4426655208874,32.0638077549554,39.1230192076158,32.0159770323244,38.7762115919038,33.2166629154047,36.3161838754302,40.1968673720142,36.0281524490656,40.331308391761,41.505216684385,42.7357350841003,32.5042795126935,29.7369558124316,41.6990615945155,34.4787557012599,29.2039304347918,19.9080121647085,18.1394134178851,23.7642400492432,18.8993211443695,26.1319875752338,37.9889590957285,28.3556308992454,35.2932404600874,29.0753817300951,25.3004660579997,25.7838858120467,33.703520969625,33.8514856778863,21.085465456589,27.0064664139806,30.6798604201133,28.3606419987292,31.0997648938009,26.1839856238555,22.0591405579888,37.4942765428962,23.8170669899359,35.2856581294767,42.3036797943273,33.292734560342,29.1268519367653,31.1867709515616,27.1077178065761,31.1514507377656,29.3897914972307,32.8155120061524,27.0384009959779,23.5460571255864,28.9791762768573,29.2836061704349,26.1766782190537,25.3312128705821,29.8511943417555,13.3653886522116,27.2048954479776,33.3443926088032,29.0534366810645,21.5360944894903,22.4913440658563,24.1407180028829,27.0276800221848,23.5580347785627,27.3487593645683,23.6108938973032,32.694190443683,30.3518588469277,24.8187735685646,32.2788972651119,20.9238914033924,26.1881994510706,33.0947412981026,31.5094611322359,26.7391328285563,43.2435576278551,39.1720808510697,39.8174011991505,19.6643458831459,18.3852613325041,24.5550355428033,35.6263124378288,40.1336336658155,38.70293474543,39.137724701263,39.679814829622,39.1702986206699,41.2379097209678,52.4323398379868,50.0301576529713,55.7502823406084,25.3938029649037,19.3127779435436,16.6867773293625,25.1826924546118,26.6601639764423,31.3429734003474,31.5020793739696,23.7948900777763,22.069172577556,18.0720589637461,19.3336599333014,22.3429250241365,18.9038500578056,21.9226406326606,14.3524840504043,12.1504050041725,22.0657389579868,21.7508356312418,17.6038505995619,24.701388725034,41.4985868337072,32.0979178817772,31.3607665018099,23.267061051706,24.4511866238519,29.5588147976148,32.1414689292675,22.1434254618353,38.4099761880972,28.3896815877069,32.4437307184051,33.3363766592781,40.8480472343066,39.1709898277282,38.579788993929,37.0829843023538,35.302387344858,34.2031297666745,37.9773213946745,26.7438016860624,29.993411240928,37.1960456317821,33.5750222420679,35.855673938241,35.5381353145041,26.7074840394248,32.6206442182925,36.395502510691,26.9348290395714,32.6246299841479,36.7421719260852,37.2400249284417,35.7904103139581,29.7076180910958,28.9780270408017,30.6450407063485,33.9496265396311,36.9186480892868,30.8827986767322,35.0120431786836
|short_description=p1@Lrch3
}}
}}

Revision as of 00:25, 18 April 2012

Short description:p1@Lrch3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lrch3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000023491, ENSMUST00000156928, ENSMUST00000164486, ENSMUST00000170201, ENSMUST00000170899, ENSMUST00000171118, NM_001081255, uc007yzr.1, uc007yzs.1, uc012aet.1, uc012aeu.1_5end
EntrezGene:Lrch3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lrch3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G736.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I543.27
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I646.41
CD326+ enterocyte, pool1.CNhs13542.11848-124I340.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I463.61
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.25
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I828.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E960.43
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E754.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E630.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F128.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E463.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E853.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A330.98
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A530.08
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A250.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A454.30
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A641.17
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A334.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H216.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I919.59
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.12
GP2+ M cell, pool1.CNhs13228.11845-124H929.29
GP2+ M cell, pool2.CNhs13231.11846-124I125.85
GP2+ M cell, pool3.CNhs13240.11847-124I228.66
Ileum epithelium, pool1.CNhs13199.10252-104B917.48
Ileum epithelium, pool2.CNhs13232.10253-104C121.42
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I322.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G625.83
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.86
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F715.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G835.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G935.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H238.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D819.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D919.16
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.90
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.42
Mouse Astrocytes, donor2.CNhs12078.11552-120C416.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A235.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I955.85
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A148.06
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C125.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E124.07
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.60
Mouse Granule cells, donor1.CNhs12131.11713-123C333.18
Mouse Granule cells, donor2.CNhs12357.11731-123E328.04
Mouse Granule cells, donor3.CNhs12108.11636-122C729.79
Mouse Meningeal cells, donor1.CNhs12132.11716-123C69.15
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C812.28
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F533.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D930.08
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D525.40
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D230.75
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F235.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D632.17
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F326.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D728.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F438.61
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.20
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I631.32
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D633.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.03
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E136.35
Mouse Schwann, donor1.CNhs12507.11728-123D931.88
Mouse Schwann, donor2.CNhs12573.11746-123F938.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G355.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.09
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F413.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A717.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I726.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E320.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I823.67
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G643.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H144.91
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B699.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G117.97
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G212.67
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.67
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.18
accessory axillary lymph node, adult.CNhs10475.1063-29H972.76
adrenal gland, adult.CNhs10508.49-24D729.39
adrenal gland, embryo E14.CNhs11038.406-44C524.63
adrenal gland, embryo E16.CNhs11004.1254-43D617.35
adrenal gland, embryo E17.CNhs11043.1263-45I120.29
adrenal gland, embryo E18.CNhs11026.1262-18F520.05
adrenal gland, neonate N00.CNhs11191.1311-23C134.81
adrenal gland, neonate N25.CNhs11223.1377-27I321.49
amnion, adult pregnant day17.5.CNhs10488.583-22A829.91
aorta, adult.CNhs10498.46-23H151.19
bone (os femoris), adult.CNhs10483.56-12G218.58
bone (os femoris), neonate N02.CNhs11227.1985-43F531.87
bone (os femoris), neonate N16.CNhs11225.1525-43A632.91
bone (os femoris), neonate N20.CNhs11195.1350-25C328.12
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B263.83
cerebellum, neonate N30.CNhs11135.1395-42I253.62
colon, adult.CNhs10468.36-18H724.27
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C719.65
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D112.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D415.38
corpora quadrigemina, adult.CNhs10501.16-22A435.95
corpus striatum, adult.CNhs10487.19-21D829.28
corpus striatum, neonate N00.CNhs11226.630-43F125.88
cortex, adult.CNhs10473.12-14D522.94
cortex, neonate N30.CNhs11107.1392-42F221.22
diencephalon, adult.CNhs10482.20-12F229.92
diencephalon, neonate N30.CNhs11201.1388-42B227.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B138.29
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A227.37
epididymis, adult.CNhs10490.58-23B226.03
eyeball, adult.CNhs10484.31-12G427.57
eyeball, embryo E12.CNhs11016.345-16C629.28
eyeball, embryo E14.CNhs10521.399-16E222.99
eyeball, embryo E15.CNhs10593.426-16C930.79
eyeball, embryo E17.CNhs11023.1261-18D429.69
eyeball, neonate N00.CNhs11207.633-15C643.14
eyeball, neonate N01.CNhs11140.1532-43E740.48
eyeball, neonate N02.CNhs11205.1551-44G840.57
eyeball, neonate N16.CNhs11188.777-19A236.22
forelimb, embryo E11.CNhs10596.335-25E230.40
forelimb, embryo E12.CNhs10600.359-14H242.17
forelimb, embryo E13.CNhs10589.384-1E241.00
forelimb, embryo E14.CNhs10577.413-26A830.47
forelimb, embryo E15.CNhs11007.437-20E739.20
forelimb, embryo E17.CNhs10598.1517-43C437.61
forelimb, embryo E18.CNhs11008.1520-43B532.31
gonad, embryo E13.CNhs11044.1564-45I631.05
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C87.72
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.75
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D512.50
heart, embryo E11.CNhs10586.331-24E930.24
heart, embryo E12.CNhs11015.353-12F530.25
heart, embryo E13.CNhs11013.376-3I923.23
heart, embryo E14.CNhs10597.403-26D432.91
heart, embryo E15.CNhs11017.431-16C827.94
heart, embryo E16.CNhs11021.457-17C627.46
heart, embryo E17.CNhs11025.479-18E530.23
heart, embryo E18.CNhs11030.1283-20G327.90
heart, neonate N00.CNhs11213.639-21E337.95
heart, neonate N03.CNhs11221.1349-25I233.41
heart, neonate N10.CNhs11118.749-24G134.80
heart, neonate N16.CNhs11209.782-15G139.72
heart, neonate N20.CNhs11127.821-26I637.13
heart, neonate N25.CNhs11196.1351-25D333.37
heart, neonate N30.CNhs11202.1390-42D232.48
hippocampus, adult.CNhs10478.13-16E826.29
hippocampus, neonate N00.CNhs11228.627-43G127.37
intestinal mucosa, adult.CNhs10506.860-29I332.38
intestine, adult.CNhs10496.178-9A324.33
intestine, embryo E12.CNhs11019.1251-16I529.43
intestine, embryo E13.CNhs11010.381-16D532.98
intestine, embryo E15.CNhs10602.976-16D828.61
intestine, embryo E16.CNhs10585.463-22H428.03
intestine, embryo E17.CNhs10582.482-18D328.24
intestine, embryo E18.CNhs10526.1289-20F719.02
intestine, neonate N00.CNhs11126.644-26D124.68
intestine, neonate N01.CNhs11192.1322-23E920.59
intestine, neonate N06.CNhs11102.688-20B826.14
intestine, neonate N07.CNhs11095.720-20F226.86
intestine, neonate N10.CNhs11098.755-23A532.17
intestine, neonate N20.CNhs11187.827-18D133.26
intestine, neonate N25.CNhs11121.1352-25E329.18
intestine, neonate N30.CNhs11131.1384-42G129.67
kidney, embryo E14.CNhs10606.411-4I921.24
kidney, embryo E15.CNhs10997.434-16F834.05
kidney, embryo E16.CNhs10584.464-22A550.72
kidney, embryo E17.CNhs11028.483-18I232.99
kidney, embryo E18.CNhs11001.1288-20C732.00
kidney, neonate N00.CNhs11214.646-21G740.19
kidney, neonate N10.CNhs11206.758-6D536.04
kidney, neonate N20.CNhs11113.832-19I127.01
kidney, neonate N25.CNhs11122.1353-25F325.90
kidney, neonate N30.CNhs11203.1385-42H122.21
liver, adult pregnant day01.CNhs10466.508-5B213.04
liver, embryo E12.CNhs10601.355-15F821.52
liver, embryo E13.CNhs10524.378-3H618.28
liver, embryo E14.CNhs10594.409-16E115.52
liver, embryo E15.CNhs10520.433-16D719.47
liver, embryo E16.CNhs10523.462-17F519.54
liver, embryo E17.CNhs10510.481-18A319.61
liver, embryo E18.CNhs10579.499-43G421.86
liver, neonate N00.CNhs11117.641-24F423.02
liver, neonate N03.CNhs11123.1345-25G216.20
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H218.61
liver, neonate N10.CNhs11115.751-24B918.41
liver, neonate N20.CNhs11220.823-25A317.93
liver, neonate N25.CNhs11198.1368-26H113.81
liver, neonate N30.CNhs11106.1382-42D116.40
lung, adult.CNhs10474.28-22B145.63
lung, embryo E12.CNhs10522.354-16G228.04
lung, embryo E14.CNhs10604.404-26F831.13
lung, embryo E15.CNhs11020.432-17C530.55
lung, embryo E16.CNhs10998.458-17B631.45
lung, embryo E17.CNhs10605.480-44A638.86
lung, embryo E18.CNhs10583.1287-20I638.33
lung, neonate N00.CNhs11224.640-42C647.42
lung, neonate N06.CNhs11212.683-20E538.31
lung, neonate N07.CNhs11111.715-19A338.09
lung, neonate N10.CNhs11219.750-23E650.39
lung, neonate N20.CNhs11109.822-18A446.05
lung, neonate N25.CNhs11119.1359-25C740.06
lung, neonate N30.CNhs11133.1394-42H238.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A133.17
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A126.11
mammary gland, adult lactating day02.CNhs10480.595-22B624.10
mammary gland, adult pregnant day19.CNhs10476.588-5H224.56
medulla oblongata, adult.CNhs10477.17-12C230.50
medulla oblongata, neonate N30.CNhs11200.1396-42A327.66
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E139.12
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.02
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E338.78
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D733.22
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D836.32
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D940.20
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D436.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D540.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D641.51
olfactory brain, adult.CNhs10489.18-22I942.74
ovary, adult.CNhs10507.91-2I732.50
ovary, embryo E18.CNhs11040.505-44H729.74
ovary, neonate N00.CNhs11217.1299-22I441.70
oviduct, adult pregnant day01.CNhs10500.988-6G634.48
pancreas, adult.CNhs10486.34-16E429.20
pancreas, embryo E14.CNhs11012.405-44F419.91
pancreas, embryo E15.CNhs11042.1556-45F218.14
pancreas, embryo E16.CNhs11003.460-26E523.76
pancreas, embryo E17.CNhs10599.1558-45G318.90
pancreas, embryo E18.CNhs10580.1535-43I726.13
pancreas, neonate N00.CNhs11105.645-26G937.99
pancreas, neonate N01.CNhs11138.1531-43D728.36
pancreas, neonate N02.CNhs11139.1539-43D835.29
pancreas, neonate N16.CNhs11136.787-43B629.08
pancreas, neonate N25.CNhs11094.1555-45E225.30
pancreas, neonate N30.CNhs11182.1548-44H525.78
pituitary gland, adult.CNhs10493.21-1G833.70
pituitary gland, embryo E12.CNhs11018.346-16E633.85
pituitary gland, embryo E13.CNhs11009.370-44C721.09
pituitary gland, embryo E14.CNhs11037.398-44A527.01
pituitary gland, embryo E15.CNhs10592.427-16B930.68
pituitary gland, embryo E16.CNhs11036.449-43F628.36
pituitary gland, embryo E17.CNhs11039.1265-44F531.10
pituitary gland, neonate N00.CNhs11190.1308-22E926.18
placenta, adult pregnant day10.CNhs10472.539-13I722.06
placenta, adult pregnant day17.CNhs10464.577-18G337.49
prostate, adult.CNhs10470.859-1F823.82
skin, adult.CNhs10492.30-1C335.29
skin, neonate N00.CNhs11124.650-25G442.30
skin, neonate N03.CNhs11215.662-22H333.29
skin, neonate N06.CNhs11097.693-20I529.13
skin, neonate N10.CNhs11108.762-6C431.19
small intestine, neonate N16.CNhs11114.790-21I127.11
spinal cord, adult.CNhs10505.24-13C931.15
spleen, adult.CNhs10465.25-2G229.39
spleen, embryo E16.CNhs11035.461-43C132.82
spleen, embryo E18.CNhs11011.1271-21F227.04
spleen, neonate N10.CNhs11116.752-24D123.55
spleen, neonate N20.CNhs11112.824-19H128.98
spleen, neonate N25.CNhs11099.1354-25G329.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C626.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C925.33
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.85
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E327.20
stomach, embryo E15.CNhs10603.1252-16G833.34
stomach, embryo E16.CNhs11022.459-17D429.05
stomach, embryo E17.CNhs11006.1035-18D521.54
stomach, embryo E18.CNhs10999.1286-20C622.49
stomach, neonate N03.CNhs11193.1340-24B824.14
stomach, neonate N07.CNhs11210.718-18A927.03
stomach, neonate N25.CNhs11104.1355-25E423.56
stomach, neonate N30.CNhs11134.1386-42I127.35
submandibular gland, adult.CNhs10469.59-29C123.61
testis, adult.CNhs10504.57-7G532.69
testis, embryo E13.CNhs11031.389-23F530.35
testis, embryo E15.CNhs11034.443-27C524.82
testis, embryo E16.CNhs11033.470-26G532.28
testis, embryo E17.CNhs11029.486-18I520.92
testis, embryo E18.CNhs11027.503-18G526.19
testis, neonate N00.CNhs11189.1300-22B733.09
testis, neonate N07.CNhs11222.726-26I431.51
testis, neonate N10.CNhs11204.763-44D926.74
testis, neonate N20.CNhs11110.839-18H343.24
testis, neonate N30.CNhs11130.1391-42E239.17
thymus, adult.CNhs10471.38-12B539.82
thymus, embryo E14.CNhs11041.402-44I419.66
thymus, embryo E15.CNhs11005.430-45I218.39
thymus, embryo E16.CNhs11002.456-26C524.56
thymus, embryo E17.CNhs10581.478-18C135.63
thymus, embryo E18.CNhs10595.1273-19G440.13
thymus, neonate N02.CNhs11181.1541-43F838.70
thymus, neonate N03.CNhs11137.2104-43C739.14
thymus, neonate N06.CNhs11197.681-26C439.68
thymus, neonate N07.CNhs11211.713-19D339.17
thymus, neonate N10.CNhs11194.748-24E441.24
thymus, neonate N20.CNhs11186.820-7A252.43
thymus, neonate N25.CNhs11125.1362-25G750.03
thymus, neonate N30.CNhs11132.1393-42G255.75
tongue, adult.CNhs10499.32-1B425.39
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F716.69
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G525.18
urinary bladder, adult.CNhs10481.879-12E426.66
uterus, adult pregnant day19.CNhs10497.590-15F531.34
uterus, adult.CNhs10509.92-27E531.50
vagina, adult.CNhs10502.89-27D523.79
vesicular gland, adult.CNhs10491.51-27F822.07
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A219.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.34
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.90
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.92
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A917.60
whole body, embryo E11.CNhs11014.324-5I824.70
whole body, embryo E12.CNhs10587.857-27C941.50
whole body, embryo E13.CNhs10512.372-23H232.10
whole body, embryo E14.5.CNhs10578.420-27D231.36
whole body, embryo E14.CNhs10519.395-14B123.27
whole body, embryo E16.CNhs10514.453-14F224.45
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G529.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G522.14
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G538.41
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G528.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G532.44
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G533.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G540.85
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G539.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G538.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G537.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.30
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G537.98
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G529.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G537.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G533.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.86
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G535.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G526.71
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G536.40
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G526.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G532.62
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G536.74
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G537.24
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G535.79
whole body, embryo E17.5.CNhs10513.490-9F929.71
whole body, embryo E17.CNhs10517.475-3I528.98
whole body, embryo E18.CNhs10516.493-3B330.65
whole body, neonate N00.CNhs10525.657-19C233.95
whole body, neonate N01.CNhs10576.659-23C636.92
whole body, neonate N06.CNhs10515.692-21D130.88
whole body, neonate N10.CNhs10518.761-6B435.01





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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