Personal tools

FFCP PHASE1:Mm9::chr13:59658591..59658707,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr13:59658591..59658707,-
|short_description=p1@Agtpbp1
|description=CAGE_peak_1_at_Agtpbp1_5end
|association_with_transcript=0bp_to_ENSMUST00000022040,ENSMUST00000091573,ENSMUST00000109830,ENSMUST00000165370,ENSMUST00000165477,ENSMUST00000165598,ENSMUST00000166369,ENSMUST00000166585,ENSMUST00000167096,ENSMUST00000167593,ENSMUST00000170555,ENSMUST00000171606,NM_001048008,NM_023328,uc007qun.1,uc007qup.1,uc007quq.1,uc007qur.1,uc007qus.1,uc011zar.1_5end
|EntrezGene=67269
|EntrezGene=67269
|HGNC=
|HGNC=
|UniProt=Q641K1,E9PX07,E9PXA7,E9Q352,E9Q3T5,Q8C1R2,E9PYF9
|UniProt=Q641K1,E9PX07,E9PXA7,E9Q352,E9Q3T5,Q8C1R2,E9PYF9
|association_with_transcript=0bp_to_ENSMUST00000022040,ENSMUST00000091573,ENSMUST00000109830,ENSMUST00000165370,ENSMUST00000165477,ENSMUST00000165598,ENSMUST00000166369,ENSMUST00000166585,ENSMUST00000167096,ENSMUST00000167593,ENSMUST00000170555,ENSMUST00000171606,NM_001048008,NM_023328,uc007qun.1,uc007qup.1,uc007quq.1,uc007qur.1,uc007qus.1,uc011zar.1_5end
|description=CAGE_peak_1_at_Agtpbp1_5end
|id=chr13:59658591..59658707,-
|ontology_enrichment_disease=
|phase1_expression=11.69086583865,1.39590163055744,2.72999543633722,1.20985684522732,0.500895729946347,2.01455126294268,1.63528848416868,12.2667157269497,6.335492496825,9.36258105287974,12.3276937122364,11.1681022593471,17.1200729931206,15.6482520330005,12.9912807108108,13.3633676477285,12.5921138063066,13.5648731104042,18.2362196695633,14.004858509335,63.5273377428491,6.65249373045932,5.74639536105658,3.67982572424835,2.75291137280604,2.29692785646008,1.7230479846363,1.939241094173,0.760093677825496,1.26015064879965,1.55211357458713,8.89042942843484,12.916360539276,0,0.577703239502549,0.498703936075477,0.816677425049476,22.1821764290561,19.533383613095,29.3173296625327,27.0586484494267,28.6879103682547,17.9638830621527,10.9530231638752,10.9487085717076,11.5634453861859,5.47673941043627,4.57852828398938,1.97717564461025,5.44403717407994,4.4795654920116,2.87505128729943,16.1071301815427,11.6057942721815,13.4437519656986,10.2903774414379,11.747871037489,12.8918023069361,33.5845325026932,29.6234948392338,19.6487735086916,4.06613438482959,7.11435836888911,2.2497492932035,3.9554654502679,4.2628806896766,2.99600110518405,5.76327457982332,20.5305432370786,18.3608076131099,21.453146057841,37.4202789568983,29.3755159465646,23.885705846916,16.3895755441184,23.8996884518605,53.9567816897005,70.8664726372792,67.8940876992596,34.4223210975806,34.5823292817108,30.7338888628488,45.7860118362265,46.1465340225978,48.5898427930256,40.3641162098925,49.1182298756905,49.9550514811806,10.7531194533121,17.0036010240267,16.232411367294,6.88339101585109,2.03991400112325,4.31762553310254,7.14754059192436,5.82434953226536,21.7688851204215,13.4639954836666,11.1707981979234,9.54016851177919,9.57735254481427,3.84979432242953,28.028576367731,21.3320010945999,4.32982082022428,3.54703811665138,2.52762222507392,15.7573754012303,21.2329064590681,11.1331604298619,7.63335437770998,8.52503339273995,7.14908041493781,9.04335843315735,9.05433044944927,10.9329934456818,6.42706916109372,19.665512541108,17.6922110389975,12.2942805960031,22.0841518460394,17.9403843660032,5.59175283654366,89.883704682545,94.4604647728682,6.64188343542338,5.63131085177825,2.99951365496704,6.98886248901856,45.5363543790661,62.6775825861518,42.2198623099224,82.0450791307545,93.3361419255706,55.0638318082834,71.0616732236778,9.3692214742291,14.1823946495506,8.84529654517861,24.411255282831,6.50602214813519,11.0353010128067,11.7040384373477,16.8789395976001,14.7639203158381,19.9857403644366,20.052169055782,36.2184719034622,4.31135985865684,7.56424320671277,7.38994721488585,7.45265490253754,7.78532297831674,6.61679116392116,11.3180175024369,7.56330213910274,13.3420505589515,6.94839349209731,7.10408748488982,9.94203708170409,7.03578179943289,8.28285482720668,9.94327889457883,9.44468312387538,7.71335564436891,9.99895962426754,9.92611585178591,13.5447797145917,17.9370236405694,19.2075932972541,37.0484459624561,48.0997958629343,45.2273237499564,52.0720904790242,77.3867010715988,38.8979434793695,3.30418782983798,2.64450566663544,9.59797127408553,13.7019636397659,8.76298736990235,7.86565746031036,4.44756087689741,5.70676878337677,8.0669940462567,3.78807595865225,10.8074139784116,5.57078121715222,8.38345574612217,5.39291645192533,5.83572734661674,7.96565093017469,4.55202962287396,7.19765629441292,5.63538678365402,8.14605311381257,6.7883370508669,10.9411879028897,12.5840708877272,17.1227771656338,15.2288766006134,17.0288086212085,7.41131567717872,11.3454671886944,9.82794975566015,11.4679677316275,9.12870546248263,12.0588579876208,5.85639459097266,9.20627639842594,6.16113861745134,6.58947391651396,10.0637744569148,9.30352369171258,2.18426371180192,6.31447194867779,7.71408878144222,6.75420929908714,16.812540305161,7.95863929436036,9.77789858652155,8.82674446030978,12.9079636558676,15.7455881995307,15.7108802984769,16.0009591243395,19.5467578691677,13.5093460685753,18.337298395611,19.1720078217413,21.5856227332369,16.0560455025478,12.0633027151418,12.5098307278303,13.769399644533,7.72622889653251,51.0550876161178,56.6132446240341,6.88526770582037,27.2668601380723,18.6149849455591,20.6932534477218,22.8348801596767,12.1874086955802,15.81870585985,19.2492040936406,22.2645885921192,21.9191893433484,26.0889933444706,52.0540532603327,13.4843080947855,6.23229612835393,9.12166972380026,17.4868330350888,43.8058956521877,4.85561272309963,9.67435382287203,19.0491130553457,22.4429438589387,26.7468578711217,15.247269296925,16.7225515559653,19.9638531895444,41.0847785316561,45.3300016872495,46.4109944616841,39.4909942674394,7.38250485528372,3.88076051348264,9.21649250635847,15.7832807941623,14.8046118609719,20.7331765958672,10.3518082698964,11.0295702789944,7.62595455109753,11.688005096913,13.6855589941428,10.4951877352339,13.0275917844817,11.1016279922917,10.5050175836839,7.57850175237612,57.852694227279,15.5492501526046,11.9704383418669,12.5932278611404,10.1718966782533,13.6694227721025,16.4720284708696,7.30907248973578,7.27747552083022,8.56839837587428,10.5013767981662,7.75023184273782,13.8257237646257,10.5845234005365,12.3362094648537,9.60795280483181,14.1607563704062,15.2082358534618,13.6113089831695,6.86959358446502,13.0481255748254,228.295640167097,6.27969493384711,5.79104716599842,7.97249872210595,7.10379029127521,7.43406952159424,8.44972118249428,8.98410255423256,13.6317147753424,69.0930585562377,139.118493022549,13.2724670663835,4.25722952109345,5.34096977257102,6.49604114888975,9.667441566044,10.530111803407,12.1397404015169,12.7012993370136,12.1159739937777,13.56481158459,13.2082302529261,13.2542717806063,14.7204117709704,14.375858968333,26.9809156502102,3.7737612073591,4.03712354742641,5.87596157274275,19.318959403219,13.7008207079363,13.1869169472431,9.64657705855796,9.5298699766719,93.748805874433,91.6047220649282,75.6222077740004,87.6451229952807,78.7844897736239,80.0717531233083,76.9525650264259,80.1571741739112,74.3153550734095,73.5219642687584,8.09541311156578,13.9658705690361,12.2928196142977,16.2881500435757,10.6902712940271,12.501358574601,15.1127774905098,16.4828045791115,16.3668796891826,16.172621552883,15.7157165931949,19.4285131627658,16.6681883296391,18.1831432829829,20.1598496034203,19.0517476513229,19.7003354106254,18.9051036054431,18.9559514369521,20.4606498986812,12.343293085875,12.7782580434723,18.8364590058384,19.3310734120997,19.7629698872194,18.6152137361688,14.451309856949,14.4688341290814,16.0248854338117,12.906272248128,19.9306830448613,18.5188426866059,21.6892452879935,19.5220419894317,17.9403148212461,19.9848462350357,16.609144199624,13.9666185131394,12.4337415844748,14.559033661888,12.0571274522619
|phase1_expression=11.69086583865,1.39590163055744,2.72999543633722,1.20985684522732,0.500895729946347,2.01455126294268,1.63528848416868,12.2667157269497,6.335492496825,9.36258105287974,12.3276937122364,11.1681022593471,17.1200729931206,15.6482520330005,12.9912807108108,13.3633676477285,12.5921138063066,13.5648731104042,18.2362196695633,14.004858509335,63.5273377428491,6.65249373045932,5.74639536105658,3.67982572424835,2.75291137280604,2.29692785646008,1.7230479846363,1.939241094173,0.760093677825496,1.26015064879965,1.55211357458713,8.89042942843484,12.916360539276,0,0.577703239502549,0.498703936075477,0.816677425049476,22.1821764290561,19.533383613095,29.3173296625327,27.0586484494267,28.6879103682547,17.9638830621527,10.9530231638752,10.9487085717076,11.5634453861859,5.47673941043627,4.57852828398938,1.97717564461025,5.44403717407994,4.4795654920116,2.87505128729943,16.1071301815427,11.6057942721815,13.4437519656986,10.2903774414379,11.747871037489,12.8918023069361,33.5845325026932,29.6234948392338,19.6487735086916,4.06613438482959,7.11435836888911,2.2497492932035,3.9554654502679,4.2628806896766,2.99600110518405,5.76327457982332,20.5305432370786,18.3608076131099,21.453146057841,37.4202789568983,29.3755159465646,23.885705846916,16.3895755441184,23.8996884518605,53.9567816897005,70.8664726372792,67.8940876992596,34.4223210975806,34.5823292817108,30.7338888628488,45.7860118362265,46.1465340225978,48.5898427930256,40.3641162098925,49.1182298756905,49.9550514811806,10.7531194533121,17.0036010240267,16.232411367294,6.88339101585109,2.03991400112325,4.31762553310254,7.14754059192436,5.82434953226536,21.7688851204215,13.4639954836666,11.1707981979234,9.54016851177919,9.57735254481427,3.84979432242953,28.028576367731,21.3320010945999,4.32982082022428,3.54703811665138,2.52762222507392,15.7573754012303,21.2329064590681,11.1331604298619,7.63335437770998,8.52503339273995,7.14908041493781,9.04335843315735,9.05433044944927,10.9329934456818,6.42706916109372,19.665512541108,17.6922110389975,12.2942805960031,22.0841518460394,17.9403843660032,5.59175283654366,89.883704682545,94.4604647728682,6.64188343542338,5.63131085177825,2.99951365496704,6.98886248901856,45.5363543790661,62.6775825861518,42.2198623099224,82.0450791307545,93.3361419255706,55.0638318082834,71.0616732236778,9.3692214742291,14.1823946495506,8.84529654517861,24.411255282831,6.50602214813519,11.0353010128067,11.7040384373477,16.8789395976001,14.7639203158381,19.9857403644366,20.052169055782,36.2184719034622,4.31135985865684,7.56424320671277,7.38994721488585,7.45265490253754,7.78532297831674,6.61679116392116,11.3180175024369,7.56330213910274,13.3420505589515,6.94839349209731,7.10408748488982,9.94203708170409,7.03578179943289,8.28285482720668,9.94327889457883,9.44468312387538,7.71335564436891,9.99895962426754,9.92611585178591,13.5447797145917,17.9370236405694,19.2075932972541,37.0484459624561,48.0997958629343,45.2273237499564,52.0720904790242,77.3867010715988,38.8979434793695,3.30418782983798,2.64450566663544,9.59797127408553,13.7019636397659,8.76298736990235,7.86565746031036,4.44756087689741,5.70676878337677,8.0669940462567,3.78807595865225,10.8074139784116,5.57078121715222,8.38345574612217,5.39291645192533,5.83572734661674,7.96565093017469,4.55202962287396,7.19765629441292,5.63538678365402,8.14605311381257,6.7883370508669,10.9411879028897,12.5840708877272,17.1227771656338,15.2288766006134,17.0288086212085,7.41131567717872,11.3454671886944,9.82794975566015,11.4679677316275,9.12870546248263,12.0588579876208,5.85639459097266,9.20627639842594,6.16113861745134,6.58947391651396,10.0637744569148,9.30352369171258,2.18426371180192,6.31447194867779,7.71408878144222,6.75420929908714,16.812540305161,7.95863929436036,9.77789858652155,8.82674446030978,12.9079636558676,15.7455881995307,15.7108802984769,16.0009591243395,19.5467578691677,13.5093460685753,18.337298395611,19.1720078217413,21.5856227332369,16.0560455025478,12.0633027151418,12.5098307278303,13.769399644533,7.72622889653251,51.0550876161178,56.6132446240341,6.88526770582037,27.2668601380723,18.6149849455591,20.6932534477218,22.8348801596767,12.1874086955802,15.81870585985,19.2492040936406,22.2645885921192,21.9191893433484,26.0889933444706,52.0540532603327,13.4843080947855,6.23229612835393,9.12166972380026,17.4868330350888,43.8058956521877,4.85561272309963,9.67435382287203,19.0491130553457,22.4429438589387,26.7468578711217,15.247269296925,16.7225515559653,19.9638531895444,41.0847785316561,45.3300016872495,46.4109944616841,39.4909942674394,7.38250485528372,3.88076051348264,9.21649250635847,15.7832807941623,14.8046118609719,20.7331765958672,10.3518082698964,11.0295702789944,7.62595455109753,11.688005096913,13.6855589941428,10.4951877352339,13.0275917844817,11.1016279922917,10.5050175836839,7.57850175237612,57.852694227279,15.5492501526046,11.9704383418669,12.5932278611404,10.1718966782533,13.6694227721025,16.4720284708696,7.30907248973578,7.27747552083022,8.56839837587428,10.5013767981662,7.75023184273782,13.8257237646257,10.5845234005365,12.3362094648537,9.60795280483181,14.1607563704062,15.2082358534618,13.6113089831695,6.86959358446502,13.0481255748254,228.295640167097,6.27969493384711,5.79104716599842,7.97249872210595,7.10379029127521,7.43406952159424,8.44972118249428,8.98410255423256,13.6317147753424,69.0930585562377,139.118493022549,13.2724670663835,4.25722952109345,5.34096977257102,6.49604114888975,9.667441566044,10.530111803407,12.1397404015169,12.7012993370136,12.1159739937777,13.56481158459,13.2082302529261,13.2542717806063,14.7204117709704,14.375858968333,26.9809156502102,3.7737612073591,4.03712354742641,5.87596157274275,19.318959403219,13.7008207079363,13.1869169472431,9.64657705855796,9.5298699766719,93.748805874433,91.6047220649282,75.6222077740004,87.6451229952807,78.7844897736239,80.0717531233083,76.9525650264259,80.1571741739112,74.3153550734095,73.5219642687584,8.09541311156578,13.9658705690361,12.2928196142977,16.2881500435757,10.6902712940271,12.501358574601,15.1127774905098,16.4828045791115,16.3668796891826,16.172621552883,15.7157165931949,19.4285131627658,16.6681883296391,18.1831432829829,20.1598496034203,19.0517476513229,19.7003354106254,18.9051036054431,18.9559514369521,20.4606498986812,12.343293085875,12.7782580434723,18.8364590058384,19.3310734120997,19.7629698872194,18.6152137361688,14.451309856949,14.4688341290814,16.0248854338117,12.906272248128,19.9306830448613,18.5188426866059,21.6892452879935,19.5220419894317,17.9403148212461,19.9848462350357,16.609144199624,13.9666185131394,12.4337415844748,14.559033661888,12.0571274522619
|short_description=p1@Agtpbp1
}}
}}

Revision as of 20:17, 17 April 2012

Short description:p1@Agtpbp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Agtpbp1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000022040, ENSMUST00000091573, ENSMUST00000109830, ENSMUST00000165370, ENSMUST00000165477, ENSMUST00000165598, ENSMUST00000166369, ENSMUST00000166585, ENSMUST00000167096, ENSMUST00000167593, ENSMUST00000170555, ENSMUST00000171606, NM_001048008, NM_023328, uc007qun.1, uc007qup.1, uc007quq.1, uc007qur.1, uc007qus.1, uc011zar.1_5end
EntrezGene:Agtpbp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Agtpbp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E912.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E612.33
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.17
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.12
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.65
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.36
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A512.59
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A213.56
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.24
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A363.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.75
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.68
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C11.26
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G822.18
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H329.32
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G927.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.95
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.58
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.44
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C512.89
Mouse Granule cells, donor1.CNhs12131.11713-123C333.58
Mouse Granule cells, donor2.CNhs12357.11731-123E329.62
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.07
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.53
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F518.36
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F137.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D223.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F216.39
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D623.90
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D353.96
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F370.87
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D767.89
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D434.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D830.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E445.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E546.15
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D640.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F649.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E149.96
Mouse Schwann, donor1.CNhs12507.11728-123D910.75
Mouse Schwann, donor2.CNhs12573.11746-123F917.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.23
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.82
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A721.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.54
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G69.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.76
accessory axillary lymph node, adult.CNhs10475.1063-29H921.23
adrenal gland, adult.CNhs10508.49-24D711.13
adrenal gland, embryo E14.CNhs11038.406-44C57.63
adrenal gland, embryo E16.CNhs11004.1254-43D68.53
adrenal gland, embryo E17.CNhs11043.1263-45I17.15
adrenal gland, embryo E18.CNhs11026.1262-18F59.04
adrenal gland, neonate N00.CNhs11191.1311-23C19.05
adrenal gland, neonate N25.CNhs11223.1377-27I310.93
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H119.67
bone (os femoris), adult.CNhs10483.56-12G217.69
bone (os femoris), neonate N02.CNhs11227.1985-43F512.29
bone (os femoris), neonate N16.CNhs11225.1525-43A622.08
bone (os femoris), neonate N20.CNhs11195.1350-25C317.94
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B289.88
cerebellum, neonate N30.CNhs11135.1395-42I294.46
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A445.54
corpus striatum, adult.CNhs10487.19-21D862.68
corpus striatum, neonate N00.CNhs11226.630-43F142.22
cortex, adult.CNhs10473.12-14D582.05
cortex, neonate N30.CNhs11107.1392-42F293.34
diencephalon, adult.CNhs10482.20-12F255.06
diencephalon, neonate N30.CNhs11201.1388-42B271.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.18
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G424.41
eyeball, embryo E12.CNhs11016.345-16C66.51
eyeball, embryo E14.CNhs10521.399-16E211.04
eyeball, embryo E15.CNhs10593.426-16C911.70
eyeball, embryo E17.CNhs11023.1261-18D416.88
eyeball, neonate N00.CNhs11207.633-15C614.76
eyeball, neonate N01.CNhs11140.1532-43E719.99
eyeball, neonate N02.CNhs11205.1551-44G820.05
eyeball, neonate N16.CNhs11188.777-19A236.22
forelimb, embryo E11.CNhs10596.335-25E24.31
forelimb, embryo E12.CNhs10600.359-14H27.56
forelimb, embryo E13.CNhs10589.384-1E27.39
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E77.79
forelimb, embryo E17.CNhs10598.1517-43C46.62
forelimb, embryo E18.CNhs11008.1520-43B511.32
gonad, embryo E13.CNhs11044.1564-45I67.56
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.10
heart, embryo E11.CNhs10586.331-24E99.94
heart, embryo E12.CNhs11015.353-12F57.04
heart, embryo E13.CNhs11013.376-3I98.28
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C89.44
heart, embryo E16.CNhs11021.457-17C67.71
heart, embryo E17.CNhs11025.479-18E510.00
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E313.54
heart, neonate N03.CNhs11221.1349-25I217.94
heart, neonate N10.CNhs11118.749-24G119.21
heart, neonate N16.CNhs11209.782-15G137.05
heart, neonate N20.CNhs11127.821-26I648.10
heart, neonate N25.CNhs11196.1351-25D345.23
heart, neonate N30.CNhs11202.1390-42D252.07
hippocampus, adult.CNhs10478.13-16E877.39
hippocampus, neonate N00.CNhs11228.627-43G138.90
intestinal mucosa, adult.CNhs10506.860-29I33.30
intestine, adult.CNhs10496.178-9A32.64
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D513.70
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H47.87
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F75.71
intestine, neonate N00.CNhs11126.644-26D18.07
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B810.81
intestine, neonate N07.CNhs11095.720-20F25.57
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G17.97
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I28.15
kidney, embryo E18.CNhs11001.1288-20C76.79
kidney, neonate N00.CNhs11214.646-21G710.94
kidney, neonate N10.CNhs11206.758-6D512.58
kidney, neonate N20.CNhs11113.832-19I117.12
kidney, neonate N25.CNhs11122.1353-25F315.23
kidney, neonate N30.CNhs11203.1385-42H117.03
liver, adult pregnant day01.CNhs10466.508-5B27.41
liver, embryo E12.CNhs10601.355-15F811.35
liver, embryo E13.CNhs10524.378-3H69.83
liver, embryo E14.CNhs10594.409-16E111.47
liver, embryo E15.CNhs10520.433-16D79.13
liver, embryo E16.CNhs10523.462-17F512.06
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G49.21
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H17.71
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B116.81
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F89.78
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B612.91
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I615.71
lung, neonate N00.CNhs11224.640-42C616.00
lung, neonate N06.CNhs11212.683-20E519.55
lung, neonate N07.CNhs11111.715-19A313.51
lung, neonate N10.CNhs11219.750-23E618.34
lung, neonate N20.CNhs11109.822-18A419.17
lung, neonate N25.CNhs11119.1359-25C721.59
lung, neonate N30.CNhs11133.1394-42H216.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A112.06
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A112.51
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H27.73
medulla oblongata, adult.CNhs10477.17-12C251.06
medulla oblongata, neonate N30.CNhs11200.1396-42A356.61
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.89
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C227.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E220.69
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.82
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D626.09
olfactory brain, adult.CNhs10489.18-22I952.05
ovary, adult.CNhs10507.91-2I713.48
ovary, embryo E18.CNhs11040.505-44H76.23
ovary, neonate N00.CNhs11217.1299-22I49.12
oviduct, adult pregnant day01.CNhs10500.988-6G617.49
pancreas, adult.CNhs10486.34-16E443.81
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F29.67
pancreas, embryo E16.CNhs11003.460-26E519.05
pancreas, embryo E17.CNhs10599.1558-45G322.44
pancreas, embryo E18.CNhs10580.1535-43I726.75
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D716.72
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B641.08
pancreas, neonate N25.CNhs11094.1555-45E245.33
pancreas, neonate N30.CNhs11182.1548-44H546.41
pituitary gland, adult.CNhs10493.21-1G839.49
pituitary gland, embryo E12.CNhs11018.346-16E67.38
pituitary gland, embryo E13.CNhs11009.370-44C73.88
pituitary gland, embryo E14.CNhs11037.398-44A59.22
pituitary gland, embryo E15.CNhs10592.427-16B915.78
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F520.73
pituitary gland, neonate N00.CNhs11190.1308-22E910.35
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G37.63
prostate, adult.CNhs10470.859-1F811.69
skin, adult.CNhs10492.30-1C313.69
skin, neonate N00.CNhs11124.650-25G410.50
skin, neonate N03.CNhs11215.662-22H313.03
skin, neonate N06.CNhs11097.693-20I511.10
skin, neonate N10.CNhs11108.762-6C410.51
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C957.85
spleen, adult.CNhs10465.25-2G215.55
spleen, embryo E16.CNhs11035.461-43C111.97
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D110.17
spleen, neonate N20.CNhs11112.824-19H113.67
spleen, neonate N25.CNhs11099.1354-25G316.47
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.31
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.57
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E37.75
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D410.58
stomach, embryo E17.CNhs11006.1035-18D512.34
stomach, embryo E18.CNhs10999.1286-20C69.61
stomach, neonate N03.CNhs11193.1340-24B814.16
stomach, neonate N07.CNhs11210.718-18A915.21
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I16.87
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G5228.30
testis, embryo E13.CNhs11031.389-23F56.28
testis, embryo E15.CNhs11034.443-27C55.79
testis, embryo E16.CNhs11033.470-26G57.97
testis, embryo E17.CNhs11029.486-18I57.10
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B78.45
testis, neonate N07.CNhs11222.726-26I48.98
testis, neonate N10.CNhs11204.763-44D913.63
testis, neonate N20.CNhs11110.839-18H369.09
testis, neonate N30.CNhs11130.1391-42E2139.12
thymus, adult.CNhs10471.38-12B513.27
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C19.67
thymus, embryo E18.CNhs10595.1273-19G410.53
thymus, neonate N02.CNhs11181.1541-43F812.14
thymus, neonate N03.CNhs11137.2104-43C712.70
thymus, neonate N06.CNhs11197.681-26C412.12
thymus, neonate N07.CNhs11211.713-19D313.56
thymus, neonate N10.CNhs11194.748-24E413.21
thymus, neonate N20.CNhs11186.820-7A213.25
thymus, neonate N25.CNhs11125.1362-25G714.72
thymus, neonate N30.CNhs11132.1393-42G214.38
tongue, adult.CNhs10499.32-1B426.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.04
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.88
urinary bladder, adult.CNhs10481.879-12E419.32
uterus, adult pregnant day19.CNhs10497.590-15F513.70
uterus, adult.CNhs10509.92-27E513.19
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A193.75
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A291.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A375.62
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D787.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A478.78
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A580.07
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A676.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A780.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A874.32
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A973.52
whole body, embryo E11.CNhs11014.324-5I88.10
whole body, embryo E12.CNhs10587.857-27C913.97
whole body, embryo E13.CNhs10512.372-23H212.29
whole body, embryo E14.5.CNhs10578.420-27D216.29
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F212.50
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.17
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.43
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.16
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.91
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.84
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G518.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.02
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G512.91
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.52
whole body, embryo E17.5.CNhs10513.490-9F917.94
whole body, embryo E17.CNhs10517.475-3I519.98
whole body, embryo E18.CNhs10516.493-3B316.61
whole body, neonate N00.CNhs10525.657-19C213.97
whole body, neonate N01.CNhs10576.659-23C612.43
whole body, neonate N06.CNhs10515.692-21D114.56
whole body, neonate N10.CNhs10518.761-6B412.06





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr13:59658591..59658707,-&oldid=757520"