FFCP PHASE1:Hg19::chr12:66218212..66218244,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:66218212..66218244,+ to FFCP PHASE1:Hg19::chr12:66218212..66218244,+: NSchange) |
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{{FFCP | {{FFCP | ||
|EntrezGene=8091 | |EntrezGene=8091 | ||
|HGNC=5009 | |HGNC=5009 | ||
|UniProt=Q1M182,Q1M188,Q1M186,F5H6H0,Q1M187,Q1M185,P52926 | |UniProt=Q1M182,Q1M188,Q1M186,F5H6H0,Q1M187,Q1M185,P52926 | ||
|association_with_transcript=0bp_to_ENST00000354636,ENST00000393578,ENST00000425208,ENST00000536545,ENST00000537275,ENST00000537429,NM_003483,NM_003484,uc001sss.1,uc001sst.1,uc001ssu.1,uc001ssv.2,uc001ssw.1,uc001ssx.2,uc010ssv.1_5end | |||
|description=CAGE_peak_5_at_HMGA2_5end | |||
|id=chr12:66218212..66218244,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.98e-27!248;CL:0000055!2.81e-27!180;CL:0000220!9.51e-27!246;CL:0000012!3.58e-22!682;CL:0000548!9.25e-22!679;CL:0000004!9.25e-22!679;CL:0000255!9.25e-22!679;CL:0002371!8.03e-20!591;CL:0000144!3.60e-18!625;CL:0000066!2.36e-16!254;CL:0000183!2.53e-14!59;CL:0000680!1.25e-13!57;CL:0000056!1.25e-13!57;CL:0000355!1.25e-13!57;CL:0000393!1.80e-13!60;CL:0000211!1.80e-13!60;CL:0000187!1.21e-12!54;CL:0000222!1.63e-12!119;CL:0000003!3.15e-12!722;CL:0000057!3.03e-10!75;CL:0000192!3.35e-09!42;CL:0000514!3.35e-09!42;CL:0000223!2.75e-08!59;CL:0002076!5.56e-08!43;CL:0000359!1.08e-07!32;CL:1000449!9.32e-07!16 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,4.42203911398782,0,9.09215565055583,10.4670175195864,1.96597234917155,1.31883489114227,6.80714941280256,3.31397375727916,4.70627602516243,9.04041792035965,8.76372108464848,12.1983199697627,3.57051068422685,5.50801866359483,0.940364164434263,0.572471974262113,2.46373965131192,4.3939923858181,1.52826811495903,1.14940825229924,0.865818594450472,0,0.383829398097213,0,4.59710612239464,11.4458249135735,2.21852406100073,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,0.895037932904712,0,0,0.144846518960824,2.3858578411533,4.37971383272372,22.4992864850481,19.7339163741682,18.093965852784,0,11.2931539370688,6.3033355273353,0,0,0,0,0,0,3.9752481473341,2.58070378531837,3.81854551768354,2.26123176769604,10.4874859052476,8.52865930014209,8.98678356108286,4.13466814670926,2.84613010149368,2.00832367658802,0.805658634218294,3.04108842287405,0,9.92690316933846,1.62028389576352,12.1447630466348,17.9623498100936,31.6438260158135,4.5994991239765,5.69559395740877,6.41206103756425,0,0,5.66922267785295,0.496971951695318,7.47120018821021,5.29636723252875,6.88407889797153,7.09336764396714,4.48542080113846,3.20246987189115,4.68668341992604,4.04574346019696,5.6578482269269,10.9519475086017,1.66493170409425,4.60940739583999,2.81185718200556,8.11616199758833,5.13424639390004,14.4965220135247,20.3161682653713,31.0796053186813,32.0227839281127,5.71631679513701,32.0597568183714,3.20309921644873,3.56400857184616,2.22540236350701,0,0,29.9638282838238,52.0493042667371,11.9137569658199,3.5118209670467,3.98434134538726,3.30523729594513,9.98203211808185,4.84352016359927,1.06778694409284,0.211931901159562,6.60200411385685,2.88547081867629,2.06112432036503,0.558350568994769,5.90717162844432,0.876933046450788,5.3011092591264,2.02509777013059,1.13152239773168,4.61512470271599,1.20902517873168,3.73033303083073,5.41130388857231,8.45512973831587,10.0381608386151,7.07447495551653,5.96383957446684,10.4574548582567,10.6770886665832,15.3915719034133,6.20461510428911,0,0.643240938192885,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,1.4763109092493,14.0241773803446,0.4115740113314,2.94017422771084,0,0,0,4.41463099414651,3.93563003337963,12.1813145311953,5.26801369961403,8.99214026060957,11.4603028549259,48.5163452630695,4.23550796903422,6.23960871167747,18.7630744632855,15.5346742666603,5.16598254637615,1.87676382089396,2.31492756288305,2.09279567458058,0,0,0,0,0,3.74935335947108,4.36753533317035,5.10390350072591,4.38836761243957,7.84711633987697,11.5014803749563,0,0,0,0,0,0,0,0,1.71072446022705,1.23392991243988,0,0,12.5586814466804,6.97536110133248,23.1015600335993,4.39523833576444,0,3.381211010224,1.32969058292435,1.04007436911366,21.0910046894957,25.5328437641901,30.3721284078353,1.14382394926518,1.62786481617433,1.64648067356154,2.93162565864362,0.710783897485092,9.50342247520115,1.20575750823834,0.871533458600294,0,0,0,0,1.67737398844108,0,67.0393453691376,4.05387658669222,17.670963739333,6.44619467663624,0,0,0,0,3.30323011489202,1.30139853857622,1.54657762555539,1.67516265334349,1.27587750330633,0,0,0,4.17151071845076,21.5073324055661,9.49427582949075,0.207970861530807,1.42743191037729,0,1.05427273493442,1.20378439891088,4.5481500811197,3.10419213877515,17.9340911604568,6.63729006750131,12.3374732544678,7.63624514104688,5.14715135716284,0,0,0,0,4.99306318531491,3.62868351995616,0.248107807818777,0.460385919864187,0.841980283299221,0,0,0.160853921143607,0,20.0472601943452,6.5697838365857,14.9471423945133,16.0968873046923,8.01851611373719,4.71351853407327,6.21570057940183,2.20994373446151,0.918515585316854,4.73437036817464,1.44236856455367,17.1455852904816,29.1117974254688,7.84349769176855,24.8436681910543,24.2768746453614,0,7.82431044271972,15.7618618754562,3.08454505380579,12.4635361270172,5.01689773854853,4.84264918785573,7.47968408035852,13.2086105286085,0,0,16.9257082576817,8.52838078819235,4.88067591996455,0,0.183138929636687,0.330037999682352,8.03971753194641,3.90036147621913,0,11.117132603594,12.0157921349423,12.1267903033642,28.5321705042978,12.568168649588,15.0817361670798,36.8179030437556,1.60257664164127,3.8015530533025,5.57351195358808,45.3025129355774,1.92199783625545,7.90237433805386,5.98143458978216,6.970372701606,1.84820148105653,2.12922412126809,6.08953094452551,2.7798632865588,1.86062352764589,4.83805880167568,7.90948561796815,3.24071329670502,8.18872932196268,4.70732886837312,7.63687795022248,1.56989728039846,3.95719406683292,4.66712950551293,8.60030537123511,3.03273722359974,4.75530963519025,3.79132610615083,2.92580243453754,2.43713489631284,1.05650146756755,2.32049849393576,0.282810863907425,6.78048699721457,2.2054613741845,1.32687795048244,4.38450885253763,3.47265320560013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| ||
|short_description=p5@HMGA2 | |||
}} | }} |
Revision as of 11:18, 18 April 2012
Short description: | p5@HMGA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_HMGA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000354636, ENST00000393578, ENST00000425208, ENST00000536545, ENST00000537275, ENST00000537429, NM_003483, NM_003484, uc001sss.1, uc001sst.1, uc001ssu.1, uc001ssv.2, uc001ssw.1, uc001ssx.2, uc010ssv.1_5end |
EntrezGene: | HMGA2 |
HGNC: | 5009 |
UniProt: | Q1M182Q1M188Q1M186F5H6H0Q1M187Q1M185P52926 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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Ontology term | p-value | n |
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Ontology term | p-value | n |
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Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.