Template:BFO: Difference between revisions
From FANTOM5_SSTAR
mNo edit summary |
mNo edit summary |
||
| Line 28: | Line 28: | ||
<html> | <html> | ||
<head> | <head> | ||
<script type="text/ | <script type="text/javascript" src="/5/sstar/rb_js/html5button/datatables.min.js"></script> | ||
<script type="text/javascript" src="/5/sstar/rb_js/datatables/extras/TableTools/media/js/TableTools.js"></script> | <script type="text/javascript" src="/5/sstar/rb_js/datatables/extras/TableTools/media/js/TableTools.js"></script> | ||
<style type="text/css" title="currentStyle"> | <style type="text/css" title="currentStyle"> | ||
@import "/5/sstar/rb_js/datatables | @import "/5/sstar/rb_js/html5button/datatables.css"; | ||
@import "/5/sstar/rb_js/datatables/extras/TableTools/media/css/TableTools.css"; | |||
</style> | </style> | ||
<script type="text/javascript"> | <script type="text/javascript"> | ||
| Line 41: | Line 39: | ||
if( $('.ont_enrich_ffcp').length ){ | if( $('.ont_enrich_ffcp').length ){ | ||
var oTable= $('.ont_enrich_ffcp').dataTable({ | var oTable= $('.ont_enrich_ffcp').dataTable({ | ||
dom: 'Blfrtip', | |||
scrollY: "300px", | |||
paging: false, | |||
scrollCollapse: true, | |||
pageLength: -1, | |||
" | order: [[0,'asc']], | ||
var title = | columnDefs: [{ width: "100px", type: "html-num", targets: [0] }], | ||
return "<a href=\"/5/sstar/index.php/"+title+"\">"+title+"</a>"; | columns: [null, | ||
} | {render: function ( data, type, row, meta ) { | ||
var title = data.split("#")[0]; | |||
return "<a href=\"/5/sstar/index.php/"+title+"\">"+title+"</a>"; | |||
} | |||
}, | |||
null | |||
] | |||
}); | |||
} | } | ||
else | else | ||
| Line 103: | Line 104: | ||
{{#ifexpr: {{#ask:[[ffcp_ontology_enrichment_celltype_id::{{{id}}}]]|format=count}} > 0| | {{#ifexpr: {{#ask:[[ffcp_ontology_enrichment_celltype_id::{{{id}}}]]|format=count}} > 0| | ||
{{#ask:[[ffcp_ontology_enrichment_celltype_id::{{{id}}}]] | {{#ask:[[ffcp_ontology_enrichment_celltype_id::{{{id}}}]] | ||
|?ffcp_ontology_enrichment_celltype_p-value|format=template|template=Triplecolumn_to_tbrow|link=none|intro=<html><span id="export_tool"></span><table class="ont_enrich_ffcp"><thead><tr><th>P-value</th><th>FFCP</th><th>Short description</th></tr></thead><tbody></html>|outro=<html></tbody></table></html>|sort=ffcp_ontology_enrichment_celltype_p-value|order=asc|limit=100|searchlabel=}} | |?ffcp_ontology_enrichment_celltype_p-value|format=template|template=Triplecolumn_to_tbrow|link=none|intro=<html><span id="export_tool"></span><table class="ont_enrich_ffcp stripe cell-border order-column compact"><thead><tr><th>P-value</th><th>FFCP</th><th>Short description</th></tr></thead><tbody></html>|outro=<html></tbody></table></html>|sort=ffcp_ontology_enrichment_celltype_p-value|order=asc|limit=100|searchlabel=}} | ||
|No analysis results for this cluster}} | |No analysis results for this cluster}} | ||
Revision as of 18:33, 15 February 2018
| Name: | {{{name}}} | ||
|---|---|---|---|
| Namespace: | {{{namespace}}} | ||
| Definition: | {{{def}}} | ||
| Xrefs: |
| ||
| Synonyms: | {{{synonym}}} | ||
| Comments: | {{{comment}}} | ||
| Alt_id: | {{{alt_id}}} | ||
| Subset: | {{{subset}}} | ||
| Created by: | {{{created_by}}} | ||
| Creation date: | {{{obo_creation_date}}} | ||
| Has quality: | {{{has_quality}}} |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
NA
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with {{{id}}} ({{{name}}}), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
"{{{obo_creation_date}}}" contains an extrinsic dash or other characters that are invalid for a date interpretation.
