Template:EntrezGene: Difference between revisions
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<tr><th scope="row" align="right" valign="top">Transcripton Factor?: </th><td>{{#switch:{{{tf?}}}|yes=[[tf?::Yes]]|[[tf?::No]]}}</td></tr> | <tr><th scope="row" align="right" valign="top">Transcripton Factor?: </th><td>{{#switch:{{{tf?}}}|yes=[[tf?::Yes]]|[[tf?::No]]}}</td></tr> | ||
</table> | </table> | ||
{{Fontsize|3|TSS regions }} | |||
---- | |||
<span id="ffcp_list_table_export_tool"></span> | |||
{{#compound_query:[[FFCP PHASE2:+]][[Category:FFCP]][[EntrezGene::{{{GeneID}}}]];?Short_description|[[FFCP PHASE1:+]][[EntrezGene::{{{GeneID}}}]];?Short_description|format=ttable|mainlabel=TSS peak ID|class=ffcp_list|limit=20000}} | |||
<br> | |||
<html> | <html> | ||
<script language="javascript" type="text/javascript"> | <script language="javascript" type="text/javascript"> | ||
$(document).ready(function() { | $(document).ready(function() { | ||
// TSS regions list | |||
var ffcp_list_table = $('.ffcp_list').dataTable(); | |||
var ffcp_list_table_tools = new TableTools( ffcp_list_table, {"sSwfPath": "/5/sstar/rb_js/datatables/extras/TableTools/media/swf/copy_csv_xls_pdf.swf", "aButtons": [ {"sExtends": "copy", "mColumns": "visible"}, {"sExtends": "csv", "mColumns": "visible"}, {"sExtends": "pdf", "mColumns": "visible"} ]}); | |||
$('#ffcp_list_table_export_tool').before(ffcp_list_table_tools.dom.container ); | |||
// hide-show animation for ucsc genome browser view | // hide-show animation for ucsc genome browser view | ||
$("#ucsc_snap_view").hover(function(){ | $("#ucsc_snap_view").hover(function(){ | ||
Revision as of 10:54, 20 April 2017
| Symbol: | {{{Symbol}}} | ||
|---|---|---|---|
| Description: | {{{description}}} | ||
| Synonyms: | |||
| Species: | NA | ||
| Xrefs: |
| ||
| Associated motifs: | NA | ||
| Transcripton Factor?: | No |
TSS regions
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
TSS expression
- Click each plot point to find sample in table
ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data
No analysis results for this cluster
Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse
| GeneID: | {{{GeneID}}} |
|---|---|
| LocusTag: | {{{LocusTag}}} |
| chromosome: | {{{chromosome}}} |
| map location: | |
| type of gene: | {{{type_of_gene}}} |
| Symbol from nomenclature authority: | {{{Symbol_from_nomenclature_authority}}} |
| Full name from nomenclature authority: | {{{Full_name_from_nomenclature_authority}}} |
| Nomenclature status: | {{{Nomenclature_status}}} |
| Other designations: | |
| Modification date: | Error: Invalid time. |
Property "Modification date" has a restricted application area and cannot be used as annotation property by a user.
