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Revision as of 17:26, 15 June 2012

Name:digestive tract diverticulum
Definition:"Branch or outpocketing of the digestive tract." [UBERON:cjm]
Xrefs:
links:
FBbt:00100316
Synonyms: "diverticulum of gut" RELATED [FBbt:00100316]
"intestinal pouch" RELATED []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004921(subdivision of digestive tract),UBERON:0009856(sac)
part_of:UBERON:0001555(digestive tract)



Children

is a:UBERON:0001153 (caecum),UBERON:0008835 (hepatic diverticulum)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009854 (digestive tract diverticulum), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.45e-69FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_3ef36c491ab51d6284684629650921a5p@chr5:90897694..90897705, +
2.45e-69FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_3ef36c491ab51d6284684629650921a5p@chr5:90897694..90897705, +
4.3e-69FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_5005549c2a2a171e4490a0eef88f724ap@chr19:25169885..25169900, +
4.3e-69FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_5005549c2a2a171e4490a0eef88f724ap@chr19:25169885..25169900, +
1.62e-68FFCP PHASE1:Hg19::chr12:100867777..100867788,+#_f5434a1a5abd3fac0e9e4ba4b92d9bd7p5@NR1H4
1.62e-68FFCP PHASE2:Hg19::chr12:100867777..100867788,+#_f5434a1a5abd3fac0e9e4ba4b92d9bd7p5@NR1H4
2.82e-68FFCP PHASE2:Hg19::chr2:21233797..21233804,-#_6f1d0ad8d0690b4c68e4c9f0c09e0f96p58@APOB
2.82e-68FFCP PHASE1:Hg19::chr8:144417558..144417572,-#_6f1d0ad8d0690b4c68e4c9f0c09e0f96p7@TOP1MT
2.82e-68FFCP PHASE1:Hg19::chr2:21233797..21233804,-#_6f1d0ad8d0690b4c68e4c9f0c09e0f96p58@APOB
2.82e-68FFCP PHASE2:Hg19::chr8:144417558..144417572,-#_6f1d0ad8d0690b4c68e4c9f0c09e0f96p7@TOP1MT
8.55e-68FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_7d988c011fbd869bf1cb4e57a365e671p6@Insc
8.55e-68FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_7d988c011fbd869bf1cb4e57a365e671p6@Insc
2.4e-67FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_91f35c8c821ff0cb441cd1294f583e1bp2@uc009nzu.1
2.4e-67FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_91f35c8c821ff0cb441cd1294f583e1bp2@uc009nzu.1
1.68e-65FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_ac87bcde6a8def2b8703dcbe6814e790p5@Bhmt
1.68e-65FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_ac87bcde6a8def2b8703dcbe6814e790p5@Bhmt
2.25e-65FFCP PHASE1:Hg19::chr2:201171064..201171071,+#_0f3d839cfb4c88abffcab4c2c9263ca2p19@SPATS2L
2.25e-65FFCP PHASE2:Hg19::chr2:201171064..201171071,+#_0f3d839cfb4c88abffcab4c2c9263ca2p19@SPATS2L
3.44e-65FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_f46ab92323f35970642e509d4c83bb85p@chr1:162917234..162917248, +
3.44e-65FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_f46ab92323f35970642e509d4c83bb85p@chr1:162917234..162917248, +
4.38e-65FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_ae4be5623ce55fd5c8c2e32e12d0cf38p1@Rtp3
4.38e-65FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_ae4be5623ce55fd5c8c2e32e12d0cf38p1@Rtp3
2.72e-64FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_669e41b65136bafdb53b5e08765e8217p2@Rtp3
2.72e-64FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_669e41b65136bafdb53b5e08765e8217p@chr7:112744083..112744109, -
2.72e-64FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_669e41b65136bafdb53b5e08765e8217p@chr7:112744083..112744109, -
2.72e-64FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_669e41b65136bafdb53b5e08765e8217p2@Rtp3
6.61e-64FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_3c107c9bff0a050e5c6469f739014487p@chr13:23928766..23928779, +
6.61e-64FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_3c107c9bff0a050e5c6469f739014487p@chr13:23928766..23928779, +
7.86e-64FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_cae9fae20cb45a008f28b482340d6ddbp3@Blvrb
7.86e-64FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_cae9fae20cb45a008f28b482340d6ddbp3@Blvrb
1.46e-63FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_7f57778b5aacff9dc74ff8d72da3afddp@chr16:22894900..22894910, +
1.46e-63FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr6:128436166..128436185, -
1.46e-63FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr6:128436166..128436185, -
1.46e-63FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr12:105004018..105004046, -
1.46e-63FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr16:22898981..22898988, -
1.46e-63FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr2:10041210..10041222, -
1.46e-63FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr16:22898981..22898988, -
1.46e-63FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr2:10041210..10041222, -
1.46e-63FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_7f57778b5aacff9dc74ff8d72da3afddp@chr12:105004018..105004046, -
1.46e-63FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_7f57778b5aacff9dc74ff8d72da3afddp@chr16:22894900..22894910, +
1.01e-62FFCP PHASE1:Hg19::chrX:153769426..153769436,+#_c28d5994e7260409fba21ee9dfd50a3cp18@IKBKG
1.01e-62FFCP PHASE2:Hg19::chrX:153769426..153769436,+#_c28d5994e7260409fba21ee9dfd50a3cp18@IKBKG
1.55e-62FFCP PHASE2:Hg19::chr10:7745167..7745178,+#_20c7c011c4bb3469d9c28c179c696fbdp3@ITIH2
1.55e-62FFCP PHASE1:Hg19::chr10:7745167..7745178,+#_20c7c011c4bb3469d9c28c179c696fbdp3@ITIH2
2.75e-62FFCP PHASE2:Hg19::chr2:97216132..97216143,+#_4b731682ec8dcd926920a0f3e36e9d4dp@chr2:97216132..97216143, +
2.75e-62FFCP PHASE1:Hg19::chr2:97216132..97216143,+#_4b731682ec8dcd926920a0f3e36e9d4dp@chr2:97216132..97216143, +
1.0e-61FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_107dc25a31d25aebb453e9a9bdfdbcfep@chr1:173155793..173155841, +
1.0e-61FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_107dc25a31d25aebb453e9a9bdfdbcfep@chr1:173155793..173155841, +
1.17e-61FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_fa66f9d6535b61b18270bec12dd2a283p@chr17:12584645..12584657, +
1.17e-61FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_fa66f9d6535b61b18270bec12dd2a283p@chr17:12584645..12584657, +
1.27e-61FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_75fd614621c753f72506f75bac6e59d7p@chr17:12588483..12588503, +
1.27e-61FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_75fd614621c753f72506f75bac6e59d7p@chr17:12588483..12588503, +
1.38e-61FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_02428dfda2da8158e94e478507cb0842p@chr1:166179426..166179437, +
1.38e-61FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_02428dfda2da8158e94e478507cb0842p@chr1:166179426..166179437, +
1.57e-61FFCP PHASE2:Mm9::chr8:34917332..34917357,-#_26d62921a7cc0401f90ce3ac08f658c7p@chr8:34917332..34917357, -
1.57e-61FFCP PHASE1:Mm9::chr8:34917332..34917357,-#_26d62921a7cc0401f90ce3ac08f658c7p@chr8:34917332..34917357, -
3.55e-61FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_39a86ef096e86733df8330b291a16ea4p@chr19:38191263..38191291, -
3.55e-61FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_39a86ef096e86733df8330b291a16ea4p@chr19:38191263..38191291, -
7.0e-61FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_e651250c37a5832ddba310fe14894047p8@Insc
7.0e-61FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_e651250c37a5832ddba310fe14894047p8@Insc
8.25e-61FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_b912c62233e4d585892729a966b02c85p@chr5:90893974..90893978, +
8.25e-61FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_b912c62233e4d585892729a966b02c85p@chr5:90893974..90893978, +
9.72e-61FFCP PHASE1:Hg19::chr20:10349456..10349475,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p1@ENST00000421143
9.72e-61FFCP PHASE2:Hg19::chr10:82049381..82049384,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p9@MAT1A
9.72e-61FFCP PHASE2:Hg19::chr2:21228233..21228242,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p56@APOB
9.72e-61FFCP PHASE2:Hg19::chr2:21258509..21258518,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p@chr2:21258509..21258518, -
9.72e-61FFCP PHASE1:Hg19::chr10:82049381..82049384,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p9@MAT1A
9.72e-61FFCP PHASE2:Hg19::chr20:10349456..10349475,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p1@ENST00000421143
9.72e-61FFCP PHASE1:Hg19::chr20:22566089..22566097,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p6@FOXA2
9.72e-61FFCP PHASE2:Hg19::chr20:22566089..22566097,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p6@FOXA2
9.72e-61FFCP PHASE2:Hg19::chr2:21239379..21239390,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p@chr2:21239379..21239390, -
9.72e-61FFCP PHASE1:Hg19::chr2:21258509..21258518,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p@chr2:21258509..21258518, -
9.72e-61FFCP PHASE1:Hg19::chr2:21228233..21228242,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p56@APOB
9.72e-61FFCP PHASE1:Hg19::chr2:21239379..21239390,-#_4ca1e6876c5d5ed84b59c6e67b719fe8p@chr2:21239379..21239390, -
1.14e-60FFCP PHASE2:Hg19::chr1:230846000..230846009,-#_01709d76f35f6b4da9b7a7010d22a214p@chr1:230846000..230846009, -
1.14e-60FFCP PHASE1:Hg19::chr1:230846000..230846009,-#_01709d76f35f6b4da9b7a7010d22a214p@chr1:230846000..230846009, -
1.14e-60FFCP PHASE1:Hg19::chr14:94844853..94844862,-#_01709d76f35f6b4da9b7a7010d22a214p35@SERPINA1
1.14e-60FFCP PHASE2:Hg19::chr14:94844853..94844862,-#_01709d76f35f6b4da9b7a7010d22a214p35@SERPINA1
1.24e-60FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_3d8abdd268c8415ec59b4061ff6ea164p1@uc009nzu.1
1.24e-60FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_3d8abdd268c8415ec59b4061ff6ea164p1@uc009nzu.1
1.35e-60FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_92ef3c44f4fdaa7b5f6a8596d04d5185p3@Klkb1
1.35e-60FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_92ef3c44f4fdaa7b5f6a8596d04d5185p3@Klkb1
1.47e-60FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_7334575791df4795fe52f492d8f9d9dbp@chr3:57191661..57191672, -
1.47e-60FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_7334575791df4795fe52f492d8f9d9dbp@chr3:57191661..57191672, -
1.59e-60FFCP PHASE1:Mm9::chr3:82814412..82814431,+#_11860e4a73677f53680d096e902f26b1p@chr3:82814412..82814431, +
1.59e-60FFCP PHASE2:Mm9::chr3:82814412..82814431,+#_11860e4a73677f53680d096e902f26b1p@chr3:82814412..82814431, +
1.76e-60FFCP PHASE2:Mm9::chr17:12583153..12583171,+#_b5fd98276c960d47c04cf19d9afd8838p@chr17:12583153..12583171, +
1.76e-60FFCP PHASE1:Mm9::chr17:12583153..12583171,+#_b5fd98276c960d47c04cf19d9afd8838p@chr17:12583153..12583171, +
1.91e-60FFCP PHASE1:Hg19::chr1:94057754..94057796,+#_1e745194d481c2d63563cb44ed6887bcp1@ENST00000431770
1.91e-60FFCP PHASE2:Hg19::chr1:94057754..94057796,+#_1e745194d481c2d63563cb44ed6887bcp1@ENST00000431770
2.3e-60FFCP PHASE1:Hg19::chr1:177939154..177939204,-#_701c55e2f256827182a3bde890512592p4@SEC16B
2.3e-60FFCP PHASE2:Hg19::chr1:177939154..177939204,-#_701c55e2f256827182a3bde890512592p4@SEC16B
2.6e-60FFCP PHASE1:Mm9::chr5:93000570..93000589,+#_442ded6724dd4d6526c3af31d159c2abp3@Fam47e
2.6e-60FFCP PHASE2:Mm9::chr5:93000570..93000589,+#_442ded6724dd4d6526c3af31d159c2abp3@Fam47e
3.45e-60FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_6d57d5ba31160c6fb36dbb9bfa32176cp@chr16:22895330..22895339, -
3.45e-60FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_6d57d5ba31160c6fb36dbb9bfa32176cp@chr8:92849825..92849837, -
3.45e-60FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_6d57d5ba31160c6fb36dbb9bfa32176cp@chr3:82835513..82835525, +
3.45e-60FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_6d57d5ba31160c6fb36dbb9bfa32176cp@chr16:22895330..22895339, -
3.45e-60FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_6d57d5ba31160c6fb36dbb9bfa32176cp@chr16:23449901..23449906, -
3.45e-60FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_6d57d5ba31160c6fb36dbb9bfa32176cp@chr15:77605636..77605639, +