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Revision as of 17:25, 15 June 2012

Name:head or neck bone
Xrefs:
links:
MA:0000569

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001474(bone element)
part_of:UBERON:0007811(craniocervical region)



Children

is a:UBERON:0003457 (head bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81bp14@C17orf67
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81bp14@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6p13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6p11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6p13@C17orf67
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_c7b014f591b3f452f653d0547dd682dfp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_c7b014f591b3f452f653d0547dd682dfp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_c7b014f591b3f452f653d0547dd682dfp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_c7b014f591b3f452f653d0547dd682dfp11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_c7b014f591b3f452f653d0547dd682dfp4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_c7b014f591b3f452f653d0547dd682dfp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_c7b014f591b3f452f653d0547dd682dfp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_c7b014f591b3f452f653d0547dd682dfp1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_c7b014f591b3f452f653d0547dd682dfp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_c7b014f591b3f452f653d0547dd682dfp10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_c7b014f591b3f452f653d0547dd682dfp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_c7b014f591b3f452f653d0547dd682dfp5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_c7b014f591b3f452f653d0547dd682dfp5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_c7b014f591b3f452f653d0547dd682dfp15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_c7b014f591b3f452f653d0547dd682dfp1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_c7b014f591b3f452f653d0547dd682dfp1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_c7b014f591b3f452f653d0547dd682dfp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_c7b014f591b3f452f653d0547dd682dfp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_c7b014f591b3f452f653d0547dd682dfp2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_c7b014f591b3f452f653d0547dd682dfp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_c7b014f591b3f452f653d0547dd682dfp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_c7b014f591b3f452f653d0547dd682dfp4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_c7b014f591b3f452f653d0547dd682dfp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_c7b014f591b3f452f653d0547dd682dfp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_c7b014f591b3f452f653d0547dd682dfp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_c7b014f591b3f452f653d0547dd682dfp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_c7b014f591b3f452f653d0547dd682dfp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_c7b014f591b3f452f653d0547dd682dfp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_c7b014f591b3f452f653d0547dd682dfp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_c7b014f591b3f452f653d0547dd682dfp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_c7b014f591b3f452f653d0547dd682dfp@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_c7b014f591b3f452f653d0547dd682dfp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_c7b014f591b3f452f653d0547dd682dfp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_c7b014f591b3f452f653d0547dd682dfp10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_c7b014f591b3f452f653d0547dd682dfp1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_c7b014f591b3f452f653d0547dd682dfp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_c7b014f591b3f452f653d0547dd682dfp6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_c7b014f591b3f452f653d0547dd682dfp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_c7b014f591b3f452f653d0547dd682dfp@chr4:63079735..63079745, -
1.87e-86FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_c7b014f591b3f452f653d0547dd682dfp@chr5:147854240..147854249, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_c7b014f591b3f452f653d0547dd682dfp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_c7b014f591b3f452f653d0547dd682dfp2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_c7b014f591b3f452f653d0547dd682dfp4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_c7b014f591b3f452f653d0547dd682dfp2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_c7b014f591b3f452f653d0547dd682dfp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_c7b014f591b3f452f653d0547dd682dfp5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_c7b014f591b3f452f653d0547dd682dfp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_c7b014f591b3f452f653d0547dd682dfp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_c7b014f591b3f452f653d0547dd682dfp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_c7b014f591b3f452f653d0547dd682dfp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_c7b014f591b3f452f653d0547dd682dfp7@Glt25d2
1.87e-86FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_c7b014f591b3f452f653d0547dd682dfp@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:89702580..89702593, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_c7b014f591b3f452f653d0547dd682dfp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_c7b014f591b3f452f653d0547dd682dfp6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_c7b014f591b3f452f653d0547dd682dfp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_c7b014f591b3f452f653d0547dd682dfp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_c7b014f591b3f452f653d0547dd682dfp5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_c7b014f591b3f452f653d0547dd682dfp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_c7b014f591b3f452f653d0547dd682dfp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_c7b014f591b3f452f653d0547dd682dfp@chr11:75421384..75421397, +
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_c7b014f591b3f452f653d0547dd682dfp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_c7b014f591b3f452f653d0547dd682dfp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_c7b014f591b3f452f653d0547dd682dfp6@Fam70b
1.87e-86FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_c7b014f591b3f452f653d0547dd682dfp2@Strc
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_c7b014f591b3f452f653d0547dd682dfp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_c7b014f591b3f452f653d0547dd682dfp2@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_c7b014f591b3f452f653d0547dd682dfp9@Ankrd24

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