FFCP PHASE2:Mm9::chr6:23789286..23789315,-: Difference between revisions
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=320405 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1473 | |MCL_coexpression_id=1473 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=E9Q835,E9Q5C0,E9Q9P3,E9Q2A3,A4PI81,Q8BYR5,A4PI84,A4PI82 | ||
|association_with_transcript=0bp_to_ENSMUST00000115362,ENSMUST00000136279,ENSMUST00000163871,ENSMUST00000166458,ENSMUST00000166822,ENSMUST00000167188,uc009bbf.1,uc009bbg.1,uc009bbh.2,uc009bbi.1,uc009bbj.1,uc009bbm.1,uc012eio.1_5end | |association_with_transcript=0bp_to_ENSMUST00000115362,ENSMUST00000136279,ENSMUST00000163871,ENSMUST00000166458,ENSMUST00000166822,ENSMUST00000167188,uc009bbf.1,uc009bbg.1,uc009bbh.2,uc009bbi.1,uc009bbj.1,uc009bbm.1,uc012eio.1_5end | ||
|cluster_id=chr6:23789286..23789315,- | |cluster_id=chr6:23789286..23789315,- | ||
Latest revision as of 00:09, 27 September 2015
| Short description: | p1@Cadps2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cadps2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1473 |
| Association with transcript: | 0bp_to_ENSMUST00000115362, ENSMUST00000136279, ENSMUST00000163871, ENSMUST00000166458, ENSMUST00000166822, ENSMUST00000167188, uc009bbf.1, uc009bbg.1, uc009bbh.2, uc009bbi.1, uc009bbj.1, uc009bbm.1, uc012eio.1_5end |
| EntrezGene: | Cadps2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neurectoderm | 2.05e-16 | 64 |
| neural plate | 2.05e-16 | 64 |
| presumptive neural plate | 2.05e-16 | 64 |
| regional part of nervous system | 1.27e-15 | 54 |
| central nervous system | 1.65e-15 | 73 |
| ecto-epithelium | 1.21e-14 | 73 |
| neural tube | 2.12e-14 | 52 |
| neural rod | 2.12e-14 | 52 |
| future spinal cord | 2.12e-14 | 52 |
| neural keel | 2.12e-14 | 52 |
| nervous system | 2.38e-14 | 75 |
| ectoderm-derived structure | 2.09e-13 | 95 |
| ectoderm | 2.09e-13 | 95 |
| presumptive ectoderm | 2.09e-13 | 95 |
| brain | 4.07e-13 | 47 |
| future brain | 4.07e-13 | 47 |
| regional part of brain | 1.31e-12 | 46 |
| pre-chordal neural plate | 1.50e-12 | 49 |
| anterior neural tube | 7.65e-12 | 40 |
| regional part of forebrain | 1.99e-11 | 39 |
| forebrain | 1.99e-11 | 39 |
| future forebrain | 1.99e-11 | 39 |
| occipital lobe | 2.27e-08 | 10 |
| visual cortex | 2.27e-08 | 10 |
| neocortex | 2.27e-08 | 10 |
| gray matter | 5.44e-08 | 34 |
| anatomical conduit | 1.79e-07 | 122 |
| cavitated compound organ | 4.29e-07 | 21 |
| epithelial fold | 5.47e-07 | 20 |
| brain grey matter | 8.98e-07 | 29 |
| regional part of telencephalon | 8.98e-07 | 29 |
| telencephalon | 8.98e-07 | 29 |
